From b77b499470641e9156f3c34b0b76182668034e24 Mon Sep 17 00:00:00 2001 From: Ben Darwin Date: Wed, 15 Sep 2021 16:44:41 -0400 Subject: [PATCH] COMP: use sha512 instead of md5 hashes for ExternalData due to Kitware API change --- .gitignore | 4 +- CMake/ANTSExternalData.cmake | 2 +- Examples/TestSuite/CMakeLists.txt | 170 +++++++++++++++--------------- 3 files changed, 88 insertions(+), 88 deletions(-) diff --git a/.gitignore b/.gitignore index f23cd8c93..5dda56fcc 100644 --- a/.gitignore +++ b/.gitignore @@ -14,9 +14,9 @@ CMakeFiles/* .RData .Rhistory .RDataTmp -.ExternalData_MD5* +.ExternalData_SHA512* *.pyc crash* .*.swp bin -build \ No newline at end of file +build diff --git a/CMake/ANTSExternalData.cmake b/CMake/ANTSExternalData.cmake index d65748829..030e023a2 100644 --- a/CMake/ANTSExternalData.cmake +++ b/CMake/ANTSExternalData.cmake @@ -42,4 +42,4 @@ list(APPEND ExternalData_URL_TEMPLATES # Tell ExternalData commands to transform raw files to content links. # TODO: Condition this feature on presence of our pre-commit hook. -set(ExternalData_LINK_CONTENT MD5) +set(ExternalData_LINK_CONTENT SHA512) diff --git a/Examples/TestSuite/CMakeLists.txt b/Examples/TestSuite/CMakeLists.txt index a93cafaad..27e972a92 100644 --- a/Examples/TestSuite/CMakeLists.txt +++ b/Examples/TestSuite/CMakeLists.txt @@ -37,7 +37,7 @@ endmacro() include(ANTSExternalData) # Tell ExternalData commands to transform raw files to content links. -set(ExternalData_LINK_CONTENT MD5) +set(ExternalData_LINK_CONTENT SHA512) set(ExternalData_SOURCE_ROOT ${${PROJECT_NAME}_SOURCE_DIR}) include(ExternalData) @@ -59,8 +59,8 @@ MakeTestDriverFromANTSbinary(antsApplyTransformsTest antsApplyTransformsTest.cxx ### # Perform testing ### -set(TestDataMD5_DIR ${CMAKE_SOURCE_DIR}/TestData) -set(SMALL_DATA_DIR ${TestDataMD5_DIR}/Data) +set(TestDataSHA512_DIR ${CMAKE_SOURCE_DIR}/TestData) +set(SMALL_DATA_DIR ${TestDataSHA512_DIR}/Data) ExternalData_expand_arguments(${PROJECT_NAME}FetchData R16_IMAGE DATA{${SMALL_DATA_DIR}/r16slice.nii.gz}) ExternalData_expand_arguments(${PROJECT_NAME}FetchData R64_IMAGE DATA{${SMALL_DATA_DIR}/r64slice.nii.gz}) @@ -80,24 +80,24 @@ if(RUN_LONG_TESTS) ## A work around for the crazy ANTS command line that is not compatible ## with the testing framework of external tests -ExternalData_expand_arguments(${PROJECT_NAME}FetchData test_mask_VAR DATA{${TestDataMD5_DIR}/test_mask.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData scale_test_mask_VAR DATA{${TestDataMD5_DIR}/scale.test_mask.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_test_mask_VAR DATA{${TestDataMD5_DIR}/rotation.test_mask.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_test_mask_VAR DATA{${TestDataMD5_DIR}/translation.test_mask.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData test_image_VAR DATA{${TestDataMD5_DIR}/test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData scale_test_image_VAR DATA{${TestDataMD5_DIR}/scale.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_test_image_VAR DATA{${TestDataMD5_DIR}/rotation.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_geom_test_image_VAR DATA{${TestDataMD5_DIR}/rotation.geom.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_test_image_VAR DATA{${TestDataMD5_DIR}/translation.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_rescale_test_image_VAR DATA{${TestDataMD5_DIR}/translation.rescale.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_rescale_test_image_VAR DATA{${TestDataMD5_DIR}/rotation.rescale.test.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData ANON0006_20_T1_dbg_splayed_image_VAR DATA{${TestDataMD5_DIR}/ANON0006_20_T1_dbg_splayed.nii.gz}) -ExternalData_expand_arguments(${PROJECT_NAME}FetchData ANON0006_20_T1_sag_twisted_image_VAR DATA{${TestDataMD5_DIR}/ANON0006_20_T1_sag_twisted.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData test_mask_VAR DATA{${TestDataSHA512_DIR}/test_mask.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData scale_test_mask_VAR DATA{${TestDataSHA512_DIR}/scale.test_mask.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_test_mask_VAR DATA{${TestDataSHA512_DIR}/rotation.test_mask.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_test_mask_VAR DATA{${TestDataSHA512_DIR}/translation.test_mask.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData test_image_VAR DATA{${TestDataSHA512_DIR}/test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData scale_test_image_VAR DATA{${TestDataSHA512_DIR}/scale.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_test_image_VAR DATA{${TestDataSHA512_DIR}/rotation.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_geom_test_image_VAR DATA{${TestDataSHA512_DIR}/rotation.geom.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_test_image_VAR DATA{${TestDataSHA512_DIR}/translation.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData translation_rescale_test_image_VAR DATA{${TestDataSHA512_DIR}/translation.rescale.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData rotation_rescale_test_image_VAR DATA{${TestDataSHA512_DIR}/rotation.rescale.test.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData ANON0006_20_T1_dbg_splayed_image_VAR DATA{${TestDataSHA512_DIR}/ANON0006_20_T1_dbg_splayed.nii.gz}) +ExternalData_expand_arguments(${PROJECT_NAME}FetchData ANON0006_20_T1_sag_twisted_image_VAR DATA{${TestDataSHA512_DIR}/ANON0006_20_T1_sag_twisted.nii.gz}) set(antsRegistrationTestName antsRegistrationTest_AffineScaleMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 0 @@ -110,7 +110,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${scale_test_image_VAR},1,200,Regular,0.10] #costMetric & fixedVolume & movingVolume & metricWeight? & numberOfHistogramBins & samplingStrategy? & samplingPercentage(numberOfSamples) --transform "Affine[0.001]" #transformType & minimumStepLength - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} --masks [${test_mask_VAR},${scale_test_mask_VAR}] #fixedBinaryVolume & movingBinaryVolume --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz,${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}_inverse.test.nii.gz] ) @@ -118,7 +118,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_AffineScaleNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 0 @@ -132,14 +132,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} -u --metric Mattes[${test_image_VAR},${scale_test_image_VAR},1,200,Regular,0.10] --transform "Affine[0.001]" #transformType & minimumStepLength - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_AffineRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 25 --compareRadiusTolerance 1 @@ -152,7 +152,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.10] --transform "Affine[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -160,7 +160,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_AffineRotationNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 0 @@ -173,14 +173,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.10] --transform "Affine[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_AffineTranslationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 0 @@ -193,7 +193,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric MeanSquares[${test_image_VAR},${translation_test_image_VAR},1,radius=NA,Regular,0.10] --transform "Affine[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_${antsRegistrationTestName}.mat} --masks [${test_mask_VAR},${translation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -201,7 +201,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_AffineTranslationNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 0 @@ -214,14 +214,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric MeanSquares[${test_image_VAR},${translation_test_image_VAR},1,radius=NA,Regular,0.10] --transform "Affine[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_antsRegistrationTest_AffineTranslationMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_antsRegistrationTest_AffineTranslationMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_RigidAnisotropicMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -234,14 +234,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${ANON0006_20_T1_dbg_splayed_image_VAR},${ANON0006_20_T1_sag_twisted_image_VAR},1,200,Regular,0.20] --transform "Rigid[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_antsRegistrationTest_RigidAnisotropicMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_antsRegistrationTest_RigidAnisotropicMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_RigidRotationHeadMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -254,14 +254,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.20] --transform "Rigid[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_RigidRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -274,7 +274,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.20] --transform "Rigid[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationHeadMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationHeadMasks.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -282,7 +282,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_RigidRotationNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -295,14 +295,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.20] --transform "Rigid[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_MSEAffineRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 0 @@ -315,7 +315,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0.1x0.1x0.1 --metric MeanSquares[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.10] --transform "Affine[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineRotationMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineRotationMasks.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -323,7 +323,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_RigidRotGeomNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -341,14 +341,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_RigidRotaRotaRotNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -371,14 +371,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_RigidRotaRotaRotNoMasks_Float) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -402,14 +402,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks_Float.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks_Float.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_SimilarityRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 11 --compareRadiusTolerance 0 @@ -422,7 +422,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0x0x0 --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.20] --transform "Similarity[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -430,7 +430,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # set(antsRegistrationTestName antsRegistrationTest_SimilarityRotationNoMasks) # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver -# --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} +# --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz # --compareIntensityTolerance 11 # --compareRadiusTolerance 0 @@ -443,14 +443,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # --smoothing-sigmas 0x0x0 # --metric Mattes[${test_image_VAR},${rotation_test_image_VAR},1,200,Regular,0.20] # --transform "Similarity[0.001]" -# --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} +# --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} # --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] # ) # set(antsRegistrationTestName antsRegistrationTest_SimilarityScaleMasks) # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver -# --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} +# --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz # --compareIntensityTolerance 9 # --compareRadiusTolerance 0 @@ -463,7 +463,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # --smoothing-sigmas 0x0x0 # --metric Mattes[${test_image_VAR},${scale_test_image_VAR},1,200,Regular,0.20] # --transform "Similarity[0.001]" -# --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} +# --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} # --masks [${test_mask_VAR},${scale_test_mask_VAR}] # --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] # ) @@ -471,7 +471,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # set(antsRegistrationTestName antsRegistrationTest_SimilarityScaleNoMasks) # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver -# --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} +# --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz # --compareIntensityTolerance 9 # --compareRadiusTolerance 0 @@ -484,14 +484,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # --smoothing-sigmas 0x0x0 # --metric Mattes[${test_image_VAR},${scale_test_image_VAR},1,200,Regular,0.20] # --transform "Similarity[0.001]" -# --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} +# --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_${antsRegistrationTestName}.mat} # --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] # ) # set(antsRegistrationTestName antsRegistrationTest_SimilarityTranslationRescaleNoMasks) # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver -# --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} +# --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz # --compareIntensityTolerance 7 # --compareRadiusTolerance 0 @@ -504,14 +504,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # --smoothing-sigmas 0x0x0 # --metric Mattes[${test_image_VAR},${translation_rescale_test_image_VAR},1,200,Regular,0.20] # --transform "Similarity[0.001]" -# --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks.mat} +# --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks.mat} # --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] # ) # set(antsRegistrationTestName antsRegistrationTest_SimilarityTranslationRescaleNoMasks_Float) # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver -# --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} +# --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz # --compareIntensityTolerance 7 # --compareRadiusTolerance 0 @@ -525,14 +525,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} # --smoothing-sigmas 0x0x0 # --metric Mattes[${test_image_VAR},${translation_rescale_test_image_VAR},1,200,Regular,0.20] # --transform "Similarity[0.001]" -# --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks_Float.mat} +# --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks_Float.mat} # --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] # ) set(antsRegistrationTestName antsRegistrationTest_CCSimilarityRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 11 --compareRadiusTolerance 0 @@ -545,7 +545,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0x0x0 --metric CC[${test_image_VAR},${rotation_test_image_VAR},1,5] --transform "Similarity[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -554,7 +554,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_MSESimilarityRotationMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 11 --compareRadiusTolerance 0 @@ -567,7 +567,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0x0x0 --metric MeanSquares[${test_image_VAR},${rotation_test_image_VAR},1,NA] --transform "Similarity[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -575,7 +575,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_MSESimilarityRotationMasks_Float) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 11 --compareRadiusTolerance 0 @@ -589,7 +589,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --smoothing-sigmas 0x0x0 --metric MeanSquares[${test_image_VAR},${rotation_test_image_VAR},1,NA] --transform "Similarity[0.001]" - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks_Float.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks_Float.mat} --masks [${test_mask_VAR},${rotation_test_mask_VAR}] --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -597,7 +597,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} set(antsRegistrationTestName antsRegistrationTest_ScaleTranslationRescaleHeadMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 7 --compareRadiusTolerance 1 @@ -615,14 +615,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_antsRegistrationTest_TranslationRescaleHeadMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_ScaleRotationRescaleHeadMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -640,14 +640,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_ScaleRotationRescaleHeadMasks_Float) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -666,14 +666,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --convergence 25x20x5 --shrink-factors 3x2x1 --smoothing-sigmas 0x0x0 - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_${antsRegistrationTestName}.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_${antsRegistrationTestName}.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_SyNScaleNoMasks) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -687,14 +687,14 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --shrink-factors 3x2x1 --smoothing-sigmas 2x1x0 --use-histogram-matching - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) set(antsRegistrationTestName antsRegistrationTest_SyNScaleNoMasks_Float) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} COMMAND ${LAUNCH_EXE} antsRegistrationTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsRegistrationTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsRegistrationTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -709,7 +709,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} --shrink-factors 3x2x1 --smoothing-sigmas 2x1x0 --use-histogram-matching - --initial-moving-transform DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks_Float.mat} + --initial-moving-transform DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks_Float.mat} --output [${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName},${CMAKE_CURRENT_BINARY_DIR}/${antsRegistrationTestName}.test.nii.gz] ) @@ -759,7 +759,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsRegistrationTestName} compareTwoTransformsTest ${CMAKE_CURRENT_BINARY_DIR}/antsRegistrationTest_initialize_transforms_per_stageComposite.h5 - DATA{${TestDataMD5_DIR}/antsRegistrationTest_initialize_transforms_per_stageComposite.result.h5} + DATA{${TestDataSHA512_DIR}/antsRegistrationTest_initialize_transforms_per_stageComposite.result.h5} ) set_property(TEST ${antsRegistrationTestName} APPEND PROPERTY DEPENDS antsRegistrationTest_initialize_transforms_per_stage) @@ -777,7 +777,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${simpleSynRegistrationTest simpleSynRegistrationTest ${test_image_VAR} ${scale_test_image_VAR} - DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} + DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} ${CMAKE_CURRENT_BINARY_DIR}/${simpleSynRegistrationTestName} ) @@ -785,7 +785,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${simpleSynRegistrationTest set(antsApplyTransformsTestName antsApplyTransformsTesting) ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsApplyTransformsTestName} COMMAND ${LAUNCH_EXE} antsApplyTransformsTestDriver - --compare DATA{${TestDataMD5_DIR}/${antsApplyTransformsTestName}.result.nii.gz} + --compare DATA{${TestDataSHA512_DIR}/${antsApplyTransformsTestName}.result.nii.gz} ${CMAKE_CURRENT_BINARY_DIR}/${antsApplyTransformsTestName}.test.nii.gz --compareIntensityTolerance 9 --compareRadiusTolerance 1 @@ -796,8 +796,8 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsApplyTransformsTestNa -i ${scale_test_image_VAR} #{moving image} -r ${test_image_VAR} #{fix image} -n linear #{interpolation type} - -t DATA{${TestDataMD5_DIR}/${antsApplyTransformsTestName}_InputWarpTransform.nii.gz} #{Warp transform} - -t DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} + -t DATA{${TestDataSHA512_DIR}/${antsApplyTransformsTestName}_InputWarpTransform.nii.gz} #{Warp transform} + -t DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} -o ${CMAKE_CURRENT_BINARY_DIR}/${antsApplyTransformsTestName}.test.nii.gz #{output file name} ) @@ -821,7 +821,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsApplyTransformsTestNa -r ${test_image_VAR} #{fix image} -n linear #{interpolation type} -t ${CMAKE_CURRENT_BINARY_DIR}/antsRegistrationTest_SyNScaleNoMasks1Warp.nii.gz #{Warp transform} - -t DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} + -t DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} -o ${CMAKE_CURRENT_BINARY_DIR}/${antsApplyTransformsTestName}.test.nii.gz #{output file name} ) set_property(TEST ${antsApplyTransformsTestName} APPEND PROPERTY DEPENDS antsRegistrationTest_SyNScaleNoMasks) @@ -836,7 +836,7 @@ ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${antsApplyTransformsTestNa -r ${test_image_VAR} #{fix image} -n linear #{interpolation type} -t ${CMAKE_CURRENT_BINARY_DIR}/simpleSynRegistrationTestingWarp.nii.gz #{Warp transform} - -t DATA{${TestDataMD5_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} + -t DATA{${TestDataSHA512_DIR}/Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat} #{Affine Transform} -o ${CMAKE_CURRENT_BINARY_DIR}/${antsApplyTransformsTestName}.test.nii.gz #{output file name} ) set_property(TEST ${antsApplyTransformsTestName} APPEND PROPERTY @@ -866,9 +866,9 @@ set_property(TEST simpleSynRegistration_Vs_antsRegistration APPEND PROPERTY # CompositeTransformUtilTest # --assemble ${CMAKE_CURRENT_BINARY_DIR}/${CompositeTransformUtilTestName}.test.h5 -# DATA{${TestDataMD5_DIR}/${CompositeTransformUtilTestName}_RigidTransform.mat} -# DATA{${TestDataMD5_DIR}/${CompositeTransformUtilTestName}_AffineTransform.mat} -# DATA{${TestDataMD5_DIR}/${CompositeTransformUtilTestName}_SyNTransform.nii.gz} +# DATA{${TestDataSHA512_DIR}/${CompositeTransformUtilTestName}_RigidTransform.mat} +# DATA{${TestDataSHA512_DIR}/${CompositeTransformUtilTestName}_AffineTransform.mat} +# DATA{${TestDataSHA512_DIR}/${CompositeTransformUtilTestName}_SyNTransform.nii.gz} # ) # Compare the results of the CompositeTransformUtil with the baseline file @@ -878,7 +878,7 @@ set_property(TEST simpleSynRegistration_Vs_antsRegistration APPEND PROPERTY # compareTwoTransformsTest # ${CMAKE_CURRENT_BINARY_DIR}/CompositeTransformUtilTest.test.h5 -# DATA{${TestDataMD5_DIR}/CompositeTransformUtilTest.result.h5} +# DATA{${TestDataSHA512_DIR}/CompositeTransformUtilTest.result.h5} # ) # set_property(TEST ${CompositeTransformUtilTestName} APPEND PROPERTY # DEPENDS CompositeTransformUtilTest) @@ -888,14 +888,14 @@ set_property(TEST simpleSynRegistration_Vs_antsRegistration APPEND PROPERTY # ExternalData_add_test( ${PROJECT_NAME}FetchData NAME ${CompositeTransformUtilTestName} # COMMAND ${LAUNCH_EXE} CompositeTransformUtilTestDriver # --compare -# DATA{${TestDataMD5_DIR}/CompositeTransformUtilTest_SyNTransform.nii.gz} +# DATA{${TestDataSHA512_DIR}/CompositeTransformUtilTest_SyNTransform.nii.gz} # ${CMAKE_CURRENT_BINARY_DIR}/02_${CompositeTransformUtilTestName}_DisplacementFieldTransform.nii.gz # --compareIntensityTolerance 9 # --compareRadiusTolerance 1 # --compareNumberOfPixelsTolerance 1000 # CompositeTransformUtilTest -# --disassemble DATA{${TestDataMD5_DIR}/CompositeTransformUtilTest.result.h5} +# --disassemble DATA{${TestDataSHA512_DIR}/CompositeTransformUtilTest.result.h5} # ${CompositeTransformUtilTestName} # )