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GBDT in nni

Gradient boosting is a machine learning technique for regression and classification problems, which produces a prediction model in the form of an ensemble of weak prediction models, typically decision trees. It builds the model in a stage-wise fashion as other boosting methods do, and it generalizes them by allowing optimization of an arbitrary differentiable loss function.

Gradient boosting decision tree has many popular implementations, such as lightgbm, xgboost, and catboost, etc. GBDT is a great tool for solving the problem of traditional machine learning problem. Since GBDT is a robust algorithm, it could use in many domains. The better hyper-parameters for GBDT, the better performance you could achieve.

NNI is a great platform for tuning hyper-parameters, you could try various builtin search algorithm in nni and run multiple trials concurrently.

1. Search Space in GBDT

There are many hyper-parameters in GBDT, but what kind of parameters will affect the performance or speed? Based on some practical experience, some suggestion here(Take lightgbm as example):

  • For better accuracy
  • learning_rate. The range of learning rate could be [0.001, 0.9].
  • num_leaves. num_leaves is related to max_depth, you don't have to tune both of them.
  • bagging_freq. bagging_freq could be [1, 2, 4, 8, 10]
  • num_iterations. May larger if underfitting.
  • For speed up
  • bagging_fraction. The range of bagging_fraction could be [0.7, 1.0].
  • feature_fraction. The range of feature_fraction could be [0.6, 1.0].
  • max_bin.
  • To avoid overfitting
  • min_data_in_leaf. This depends on your dataset.
  • min_sum_hessian_in_leaf. This depend on your dataset.
  • lambda_l1 and lambda_l2.
  • min_gain_to_split.
  • num_leaves.

Reference link: lightgbm and autoxgoboost

2. Task description

Now we come back to our example "auto-gbdt" which run in lightgbm and nni. The data including :githublink:`train data <examples/trials/auto-gbdt/data/regression.train>` and :githublink:`test data <examples/trials/auto-gbdt/data/regression.train>`. Given the features and label in train data, we train a GBDT regression model and use it to predict.

3. How to run in nni

3.1 Install all the requirments

pip install lightgbm
pip install pandas

3.2 Prepare your trial code

You need to prepare a basic code as following:

...

def get_default_parameters():
    ...
    return params


def load_data(train_path='./data/regression.train', test_path='./data/regression.test'):
    '''
    Load or create dataset
    '''
    ...

    return lgb_train, lgb_eval, X_test, y_test

def run(lgb_train, lgb_eval, params, X_test, y_test):
    # train
    gbm = lgb.train(params,
                    lgb_train,
                    num_boost_round=20,
                    valid_sets=lgb_eval,
                    early_stopping_rounds=5)
    # predict
    y_pred = gbm.predict(X_test, num_iteration=gbm.best_iteration)

    # eval
    rmse = mean_squared_error(y_test, y_pred) ** 0.5
    print('The rmse of prediction is:', rmse)

if __name__ == '__main__':
    lgb_train, lgb_eval, X_test, y_test = load_data()

    PARAMS = get_default_parameters()
    # train
    run(lgb_train, lgb_eval, PARAMS, X_test, y_test)

3.3 Prepare your search space.

If you like to tune num_leaves, learning_rate, bagging_fraction and bagging_freq, you could write a :githublink:`search_space.json <examples/trials/auto-gbdt/search_space.json>` as follow:

{
    "num_leaves":{"_type":"choice","_value":[31, 28, 24, 20]},
    "learning_rate":{"_type":"choice","_value":[0.01, 0.05, 0.1, 0.2]},
    "bagging_fraction":{"_type":"uniform","_value":[0.7, 1.0]},
    "bagging_freq":{"_type":"choice","_value":[1, 2, 4, 8, 10]}
}

More support variable type you could reference here.

3.4 Add SDK of nni into your code.

+import nni
...

def get_default_parameters():
    ...
    return params


def load_data(train_path='./data/regression.train', test_path='./data/regression.test'):
    '''
    Load or create dataset
    '''
    ...

    return lgb_train, lgb_eval, X_test, y_test

def run(lgb_train, lgb_eval, params, X_test, y_test):
    # train
    gbm = lgb.train(params,
                    lgb_train,
                    num_boost_round=20,
                    valid_sets=lgb_eval,
                    early_stopping_rounds=5)
    # predict
    y_pred = gbm.predict(X_test, num_iteration=gbm.best_iteration)

    # eval
    rmse = mean_squared_error(y_test, y_pred) ** 0.5
    print('The rmse of prediction is:', rmse)
+   nni.report_final_result(rmse)

if __name__ == '__main__':
    lgb_train, lgb_eval, X_test, y_test = load_data()
+   RECEIVED_PARAMS = nni.get_next_parameter()
    PARAMS = get_default_parameters()
+   PARAMS.update(RECEIVED_PARAMS)

    # train
    run(lgb_train, lgb_eval, PARAMS, X_test, y_test)

3.5 Write a config file and run it.

In the config file, you could set some settings including:

  • Experiment setting: trialConcurrency, maxExecDuration, maxTrialNum, trial gpuNum, etc.
  • Platform setting: trainingServicePlatform, etc.
  • Path seeting: searchSpacePath, trial codeDir, etc.
  • Algorithm setting: select tuner algorithm, tuner optimize_mode, etc.

An config.yml as follow:

authorName: default
experimentName: example_auto-gbdt
trialConcurrency: 1
maxExecDuration: 10h
maxTrialNum: 10
#choice: local, remote, pai
trainingServicePlatform: local
searchSpacePath: search_space.json
#choice: true, false
useAnnotation: false
tuner:
  #choice: TPE, Random, Anneal, Evolution, BatchTuner
  #SMAC (SMAC should be installed through nnictl)
  builtinTunerName: TPE
  classArgs:
    #choice: maximize, minimize
    optimize_mode: minimize
trial:
  command: python3 main.py
  codeDir: .
  gpuNum: 0

Run this experiment with command as follow:

nnictl create --config ./config.yml