From dc9f6a9546f12d4b3adf9508fdfabfa1c310a5a1 Mon Sep 17 00:00:00 2001 From: Quarto GHA Workflow Runner Date: Mon, 30 Dec 2024 23:48:31 +0000 Subject: [PATCH] Built site for gh-pages --- .github/CONTRIBUTING.html | 137 +++- .github/index.html | 55 +- .nojekyll | 2 +- CHANGELOG.html | 133 +++- LICENSE.html | 137 +++- docs/cite.html | 876 +++++++++++++++++++++ docs/contributors.html | 853 ++++++++++++++++++++ docs/index.html | 134 +++- docs/modules.html | 99 ++- docs/modules/bedops_bedmap.html | 55 +- docs/modules/bedtools_map.html | 55 +- docs/modules/bedtools_merge.html | 55 +- docs/modules/bedtools_sort.html | 55 +- docs/modules/bwa_index.html | 55 +- docs/modules/bwa_mem.html | 55 +- docs/modules/cat_cat.html | 55 +- docs/modules/cat_fastq.html | 55 +- docs/modules/convert_sicer.html | 55 +- docs/modules/custom_bam2fastq.html | 55 +- docs/modules/custom_combinepeakcounts.html | 55 +- docs/modules/custom_consensuspeaks.html | 55 +- docs/modules/custom_countfastq.html | 55 +- docs/modules/custom_formatmergedbed.html | 55 +- docs/modules/custom_normalizepeaks.html | 55 +- docs/modules/cutadapt.html | 55 +- docs/modules/khmer_uniquekmers.html | 55 +- docs/modules/picard_samtofastq.html | 55 +- docs/modules/samtools_filteraligned.html | 55 +- docs/modules/samtools_flagstat.html | 55 +- docs/modules/samtools_sort.html | 55 +- docs/modules/sort_bed.html | 55 +- docs/subworkflows.html | 59 +- docs/subworkflows/consensus_peaks.html | 55 +- docs/subworkflows/filter_blacklist.html | 55 +- search.json | 102 ++- sitemap.xml | 68 +- 36 files changed, 3247 insertions(+), 728 deletions(-) create mode 100644 docs/cite.html create mode 100644 docs/contributors.html diff --git a/.github/CONTRIBUTING.html b/.github/CONTRIBUTING.html index 5be3654..4927f38 100644 --- a/.github/CONTRIBUTING.html +++ b/.github/CONTRIBUTING.html @@ -64,6 +64,8 @@ + + @@ -105,53 +107,66 @@ - +
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VS code extensions

} }); +