v1.10.0

Main changes to mention:

• Better model-compatibility regarding known config.linking.filters.cuis issue
  • The default value (an empty dict {}) will be converted to an empty set in memory
• When saving a model, the config is now saved separately
  • We retain backwards compatibility for when the config is saved alongside the CDB (as was the case this far)
• Add a CDB merge method (in medcat.utils.cdb_utils)
• We can now safely fall back to en_core_web_md spacy model
  • If the spacy model isn't provided by the CAT for some reason
  • This includes the possibility of automatically downloading the dependency if it doesn't exist
• Many other changes as per below

What's Changed

• Bump urllib3 from 1.26.5 to 1.26.17 in /webapp/webapp by @dependabot in #351
• Cu 8692wbcq5 docs builds by @mart-r in #359
• CU-8692uznvd: Allow empty-dict config.linking.filters.cuis and convert to set in memory by @mart-r in #352
• CU-8692t3fdf separate config on save by @mart-r in #350
• CU-2cdpd4t: Unify default addl_info in different methods. by @mart-r in #363
• CU-86931prq4: GHA runs on node12 by @mart-r in #368
• Cu 1yn0v9e duplicate multiprocessing methods by @mart-r in #364
• CU-2exy49p: Make sure the cdb.add_concept really adds a concept or somehow make it clear by @adam-sutton-1992 in #370
• 869377m3u: Add comment regarding demo link load times to README by @mart-r in #376
• Added README.md documentation for CPU only installations by @adam-sutton-1992 in #365
• Cu 8692zguyq no preferred name by @mart-r in #367
• Add trainer callbacks for Transformer NER by @baixiac in #377
• Bump django from 3.2.20 to 3.2.23 in /webapp/webapp by @dependabot in #369
• Bump urllib3 from 1.26.17 to 1.26.18 in /webapp/webapp by @dependabot in #360
• CU-2e77a31 improve print stats by @mart-r in #366
• CU2e77a5x - Add a CDB merge function by @adam-sutton-1992 in #373
• CU-8693az82g Remove cdb tests side effects by @mart-r in #380
• CU-8693bpq82 fallback spacy model by @mart-r in #384
• Fix stopwords loading bug by @jenniferajiang in #383
• CU-8693cv3w0 Fix fallback spacy model existance on pip installs by @mart-r in #386
• CU-8693b0a61 Add method to get spacy model version by @mart-r in #381

New Contributors

• @adam-sutton-1992 made their first contribution in #370
• @jenniferajiang made their first contribution in #383

Full Changelog: v1.9.3...v1.10.0