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MultiDexIO.readMultiDexContainer() methods now return MultiDexContainer<WrappingMultiDexFile<DexBackedDexFile>> to allow access to the underlying DexBackedDexFile set.
Added RawDexIO.writeRawDexFile(DexDataStore dataStore, ...) to allow (raw-only) writing to a memory buffer or other non-file destinations. (But see JesusFreke/smali#554 for issues and fixes affecting MemoryDataStore.)
Extensive internal refactoring to allow future implementation of multi-dex reading and writing of non-file containers, should the need arise.