v3.2.0

github-actions released this 24 Aug 12:54

· 594 commits to main since this release

3.2.0 (2023-08-24)

Bug Fixes

#254: address linting and snackbar (20ef09d), closes #254
#254: clean up jsonld function and response handling for dataset upload (ab53f8f), closes #254
#254: disable next button on sdd form for required files, process doi dates correctly (f3f8cbe), closes #254
#254: resolve SDD form errors and add basic unit tests (f272e3c)
#398: add Edge to supported browsers, update auth reroute (3dc7d95), closes #398
#400: fix undefined images result bug, adjust metamine mobile styling (9198262)
#400: make Metamine homepage responsive for smaller screen sizes (ddea25d), closes #400

Features

#253: update download links for sdd files (53250e3), closes #253
#254: add dataset page for viewing successful submissions (60b4738), closes #254
#254: add dialog box for sdd upload (8516f01), closes #254
#254: Add file fetching the file manager utility (ced878a), closes #254
#254: Adding a new controller to delete file (5960882), closes #254
#254: Adding a new endpoint to delete file (6584d0c), closes #254
#254: Adding directory path to restful service environment config (367d77c), closes #254
#254: migrate dataset code from whyis; add doi and orcid lookup and autofill (40a9bf9), closes #254
#254: Refactored submitted filepath URL for SDD curation (6419136), closes #254
#254: successfully submit nanopub for dataset, file upload (b8a9f05), closes #254
#254: update SDD form's field validation and results step (d8f4c5b), closes #254
#303: Add admin menu to app main drawer (9d15124), closes #303
#303: Add css styling required for portal services (8aeecb2), closes #303
#303: Add first and lastname name to UI store logic (3b8a4a8), closes #303
#303: Add manage curation to admin portal, refactor reusable xml search component and update unit tests (0afca29), closes #303
#303: Add new environment variables for mail setup (71253bb), closes #303
#303: Add new UI routes for portal services (e9c2fd4), closes #303
#303: Add swagger documentation route to header navigation (11a2726), closes #303
#303: Added unit testing (2379c83), closes #303
#303: Create and add contact inquiries store module (4ed80a0), closes #303
#303: Create portal UI pages (cdc2780), closes #303
#303: Fix typo (02a4cb3)
#303: Linting fixes (ee340a1), closes #303
#303: Refactor graphql user query (282f8b2), closes #303
#303: Refactored dialog component button (ce98a60), closes #303
#303: Remove apiAccess from projected field (c383649), closes #303
#303: Update contact and user gql schemas for frontend application (d1f8091), closes #303
#303: Update description texts (8172f2c), closes #303
#303: Update restful services graphql queries and mutations for contact and user services. And also enabling email trigger service (e2751ae), closes #303
#303: Update unit test import and expected text assertions (44c2b8d), closes #303
#303: Update user graphql queries and mutations (3547c7e), closes #303
#303: Update user management and fix admin port ui bugs (3f6a04e)
#379: integrate xlsx backend updates to UI (65abbf8), closes #379
#390: Add isAdmin middleware verifier (beafcc8), closes #390
#390: Add swagger middleware logic and required env variables (2a577fa), closes #390
#390: Enable swagger on restful services (1489671), closes #390
#390: Rename api documentation route (e7213c2), closes #390
#390: Update controllers requiring admin middleware service (8e70908), closes #390
#391: Add datasetId status enumerated values (60171c8), closes #391
#391: Add logic to convert curated json object to xml (68f8211), closes #391
#391: Add new config definitions for curation workflow (6146534), closes #391
#391: Add new delete curation endpoint (543d1ef), closes #391
#391: Add status enumerated import (69bff6c), closes #391
#391: Increase test coverage requirements (7ccde1e), closes #391
#391: Linter and unit test fixes (f23889d), closes #391
#391: Refactor base json structure (0043428), closes #391
#391: Refactor curation responses (7dd6efe), closes #391
#391: Refactor curation unit test and mock data (89ae630), closes #391
#391: Refactor mutation to use datasetId collection (00a5067), closes #391
#391: Refactor xml conversion logic (335d624), closes #391
#391: Refactored spreadsheet curation flow (9c40d1d), closes #391
#391: Remove unused comment vuex store folder (8b4d9d8), closes #391
#391: Rename upload menu dropdown option to spreadhseet upload (3633fb3), closes #391
#391: Replace csv2json with csv-parser (24cdcb0), closes #391
#391: skipping failing test (a67feb3), closes #391
#391: Update backend curation flow in curationController.js (d725b30), closes #391
#391: Update base schema json and refactor curation controller (d91a7d4), closes #391
#391: Update curated sample collection model (fabd5cf), closes #391
#391: Update curation routes api endpoints (2faba5f), closes #391
#391: update spreadsheet form with xml response, fix snackbar (d757f8b)
#391: Update swagger doc with curation APIs (201e87c), closes #391
#400: make explorer header logo a button to match other headers (edaabc1), closes #400
#403: add and fix url query params for xml and chart search (a4086cc)
#413: add UI for filterByID, fix reduce for ImageDetailView images (0959ab3)
#413: Added filterByID option to image query input enums (8cc87f8), closes #413
#413: Expand image query pipeline to query fields with missing content (4fbf8d2), closes #413
#413: Refactor image transformer to look for image object while looping (45725d7), closes #413
#416: Add a library to unzip files on the server (561ae1d), closes #416
#416: Add bucket store link for admin user (a21f999), closes #416
#416: Add coverage threshold to frontend app test (8bcfaab), closes #416
#416: Add new mongo collection for storing temporary files (901d94f), closes #416
#416: Add unit testing for bulk curation (906ad11), closes #416
#416: adding a middleware to calculate latency and add it to backend server response (8963a98), closes #416
#416: Adding bulk curation feature and updated swagger doc with its new endpoint (ece8363), closes #416
#416: Adding default minio bucket name (352a4dd), closes #416
#416: Adding logic to parse nested files to filemanager utils logic (01fdb26), closes #416
#416: Adding minio connection utils (7a3a512), closes #416
#416: Bucket store code fixes (57b5765), closes #416
#416: Configure bucket storage proxy (d8fae4f), closes #416
#416: Creating a whitelist of acceptable files (9f95874), closes #416
#416: Enabling minio s3 bucket storage (c851901), closes #416
#416: Exposing minio on proxy (dcc9da0), closes #416
#416: Fix reusable search component import (6810da2)
#416: Fix styling and page issues for admin portal (5ef3dc6)
#416: Fix UI styling bugs, fix image loader gallery bug, fix image total response bug on search and updated unit test (6c7f9a7)
#416: Installing minio package for restful service (a7b663e), closes #416
#416: Linting and text fixes (10a8ec1), closes #416
#416: Merge upstream changes (fd0b70a), closes #416
#416: Properly define and set file response headers (855bfd6), closes #416
#416: Refactor file directory name to be served from env config (6871c20), closes #416
#416: Remove latency logic and merge into middleware (98a7fd3), closes #416
#416: Removing unused collection (fdd9d3f), closes #416
#416: Reusing imageTotal on search page to render total number of images (4181343), closes #416
#416: Unit test fix (50074c3), closes #416
#416: Unit test fix (aaa0df3), closes #416
#416: Update bulk curation to curate nested folders in root and ignore _MACOSX folders (8486725), closes #416
#416: Update deleteFile import at auth check (621a2ab), closes #416
#416: Update failing test and linter fixes (311d4cf), closes #416
#416: Update file validation logic and add files route to swagger (246aab3), closes #416
#416: Update unit test for file and bulk curation changes (0e48dcc), closes #416
#416: Updating bulk curation logic (6e63043), closes #416
#416: Updating latency response middleware service (55f9a13), closes #416
#416: Updating minio image and added required environment variables required by the restful service (4aa4124), closes #416
#417: update dataset page for sdd style uploads (56f9c66), closes #417
#425: add bulk upload ui and unit test (4e100a8), closes #425
#425: remove polymerizer links from tools (cbbc723), closes #425
#425: separate the XML view code, update unit test (e77dba9), closes #425
#425: use Vuex for bulk uploads and re-route to XML page for successful submissions (0ba5f51), closes #425
#428: create new explorer-style tools page and empty dynamfit page (2567b86), closes #428
#428: update tool links and descriptions (254a0a1), closes #428
#428: update tools links on explorer page (b13924c), closes #428
dynamfit: Add dynamfit temporarily (220d3cb)
none: backend updates and fixes (80dcc56)

Performance Improvements

#391: Merge Upstream changes (d97be14), closes #391

Assets 2