diff --git a/config/codon_xlarge.config b/config/codon_xlarge.config index c7d333dc..65d7b1a1 100644 --- a/config/codon_xlarge.config +++ b/config/codon_xlarge.config @@ -21,7 +21,7 @@ process { cpus = 4; memory = { 2.GB * task.attempt } } withName: DREP { - cpus = 32; memory = { 100.GB * task.attempt } + cpus = 32; memory = { 200.GB * task.attempt } } withName: EGGNOG_MAPPER { cpus = 16; memory = { 50.GB * task.attempt } diff --git a/nextflow.config b/nextflow.config index 7436468b..2e750327 100644 --- a/nextflow.config +++ b/nextflow.config @@ -105,7 +105,7 @@ profiles { process { cache = "lenient" errorStrategy = { - task.exitStatus in 137..140 && task.attempt <= 2 ? 'retry' : 'finish' + task.exitStatus in ((130..145) + 104 + 247 + 250) && task.attempt <= 2 ? 'retry' : 'finish' } queue = { task.memory >= 200.GB ? 'bigmem' : 'production'