IN PROGRESS

|project_name|

|short_description|

|long_description|

Features

• Something really useful
• Makes things faster

Requirements

See requirements files and Dockerfile for full information. At the least you'll need:

• CGATCore
• R >= 3.2
• Python >= 3.5
• r-docopt
• r-data.table
• r-ggplot2

Installation

pip install git+git://github.com/|github_user|/|project_name|.git

To use

# Create a folder or a whole data science project, e.g. project_quickstart -n QTL_project
cd QTL_project/results
mkdir tests ; cd tests
# Download test files, e.g.:
wget -nH -np -r --cut-dirs=4 -A .txt http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/Sample_Data/
python pipeline_QTL --help
python pipeline_QTL config
etc

Contribute

• Issue Tracker

• Source Code

• Pull requests welcome!

Support

If you have any issues, pull requests, etc. please report them in the issue tracker.