diff --git a/lerna.json b/lerna.json index b0bdac5aea..a3f3aeaad6 100644 --- a/lerna.json +++ b/lerna.json @@ -1,5 +1,5 @@ { - "version": "1.7.10", + "version": "1.7.11", "npmClient": "yarn", "useWorkspaces": true } diff --git a/packages/core/package.json b/packages/core/package.json index 662f44626a..2da11c3af8 100644 --- a/packages/core/package.json +++ b/packages/core/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/core", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 core libraries used by plugins", "keywords": [ "jbrowse", diff --git a/packages/text-indexing/package.json b/packages/text-indexing/package.json index ed4a97500c..2541ffbc74 100644 --- a/packages/text-indexing/package.json +++ b/packages/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/text-indexing", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 text indexing for desktop", "keywords": [ "jbrowse", diff --git a/plugins/alignments/package.json b/plugins/alignments/package.json index 08934b3c03..bf61607ad1 100644 --- a/plugins/alignments/package.json +++ b/plugins/alignments/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-alignments", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 alignments adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/arc/package.json b/plugins/arc/package.json index 45e3ca77d2..d3d0cdc0e5 100644 --- a/plugins/arc/package.json +++ b/plugins/arc/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-arc", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 arc adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/authentication/package.json b/plugins/authentication/package.json index 6b79484385..f2211134ba 100644 --- a/plugins/authentication/package.json +++ b/plugins/authentication/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-authentication", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 Authentication", "keywords": [ "jbrowse", diff --git a/plugins/bed/package.json b/plugins/bed/package.json index 27d04fa217..1246065949 100644 --- a/plugins/bed/package.json +++ b/plugins/bed/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-bed", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 bed adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/breakpoint-split-view/package.json b/plugins/breakpoint-split-view/package.json index 252bbaa60d..4cb21fe88a 100644 --- a/plugins/breakpoint-split-view/package.json +++ b/plugins/breakpoint-split-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-breakpoint-split-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 breakpoint detail split view", "keywords": [ "jbrowse", diff --git a/plugins/circular-view/package.json b/plugins/circular-view/package.json index 1ded8ae3a2..0e691b2f75 100644 --- a/plugins/circular-view/package.json +++ b/plugins/circular-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-circular-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 circular view", "keywords": [ "jbrowse", diff --git a/plugins/comparative-adapters/package.json b/plugins/comparative-adapters/package.json index 239ecbca97..16db17c515 100644 --- a/plugins/comparative-adapters/package.json +++ b/plugins/comparative-adapters/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-comparative-adapters", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 comparative adapters", "keywords": [ "jbrowse", diff --git a/plugins/config/package.json b/plugins/config/package.json index 91b6ea1970..3f0bdfbd49 100644 --- a/plugins/config/package.json +++ b/plugins/config/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-config", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 config utilities", "keywords": [ "jbrowse", diff --git a/plugins/data-management/package.json b/plugins/data-management/package.json index 2710ca90f3..2a28c1b023 100644 --- a/plugins/data-management/package.json +++ b/plugins/data-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-data-management", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/dotplot-view/package.json b/plugins/dotplot-view/package.json index 481b71284b..40b3bf6683 100644 --- a/plugins/dotplot-view/package.json +++ b/plugins/dotplot-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-dotplot-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 dotplot view", "keywords": [ "jbrowse", diff --git a/plugins/gff3/package.json b/plugins/gff3/package.json index 17a9524860..11d251a39c 100644 --- a/plugins/gff3/package.json +++ b/plugins/gff3/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gff3", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 gff3.", "keywords": [ "jbrowse", diff --git a/plugins/grid-bookmark/package.json b/plugins/grid-bookmark/package.json index edd2097903..5f2493d42d 100644 --- a/plugins/grid-bookmark/package.json +++ b/plugins/grid-bookmark/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-grid-bookmark", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 grid bookmark widget", "keywords": [ "jbrowse", diff --git a/plugins/gtf/package.json b/plugins/gtf/package.json index 1b0f619d72..59b947d75e 100644 --- a/plugins/gtf/package.json +++ b/plugins/gtf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-gtf", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 gtf feature adapter", "keywords": [ "jbrowse", diff --git a/plugins/hic/package.json b/plugins/hic/package.json index 01645a8b8d..58dc636cc1 100644 --- a/plugins/hic/package.json +++ b/plugins/hic/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-hic", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 hic adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/jobs-management/package.json b/plugins/jobs-management/package.json index 2bef05c2e8..b452ca1b23 100644 --- a/plugins/jobs-management/package.json +++ b/plugins/jobs-management/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-jobs-management", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 jobs management", "keywords": [ "jbrowse", @@ -34,7 +34,7 @@ }, "dependencies": { "@babel/runtime": "^7.17.9", - "@jbrowse/text-indexing": "^1.7.10", + "@jbrowse/text-indexing": "^1.7.11", "@material-ui/icons": "^4.9.1" }, "peerDependencies": { diff --git a/plugins/legacy-jbrowse/package.json b/plugins/legacy-jbrowse/package.json index 70e39fe8f0..375da16e17 100644 --- a/plugins/legacy-jbrowse/package.json +++ b/plugins/legacy-jbrowse/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-legacy-jbrowse", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data", "keywords": [ "jbrowse", diff --git a/plugins/linear-comparative-view/package.json b/plugins/linear-comparative-view/package.json index a09f878721..4b341be1c1 100644 --- a/plugins/linear-comparative-view/package.json +++ b/plugins/linear-comparative-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-comparative-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 linear comparative view", "keywords": [ "jbrowse", diff --git a/plugins/linear-genome-view/package.json b/plugins/linear-genome-view/package.json index 96f8f5c674..c9da2aab1f 100644 --- a/plugins/linear-genome-view/package.json +++ b/plugins/linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-linear-genome-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 linear genome view", "keywords": [ "jbrowse", diff --git a/plugins/lollipop/package.json b/plugins/lollipop/package.json index 0b4ef203c6..29af1ccbca 100644 --- a/plugins/lollipop/package.json +++ b/plugins/lollipop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-lollipop", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 plugin for lollipops", "keywords": [ "jbrowse", diff --git a/plugins/menus/package.json b/plugins/menus/package.json index 507383e35d..6f5255d36b 100644 --- a/plugins/menus/package.json +++ b/plugins/menus/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-menus", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 basic menus", "keywords": [ "jbrowse", diff --git a/plugins/protein/package.json b/plugins/protein/package.json index 72bed2da81..8b8b7d2fec 100644 --- a/plugins/protein/package.json +++ b/plugins/protein/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-protein", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 protein-specific renderers, etc.", "keywords": [ "jbrowse", diff --git a/plugins/rdf/package.json b/plugins/rdf/package.json index 6be9df9f7a..020348aca6 100644 --- a/plugins/rdf/package.json +++ b/plugins/rdf/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-rdf", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 RDF resources", "keywords": [ "jbrowse", diff --git a/plugins/sequence/package.json b/plugins/sequence/package.json index c25cd3069b..5894cac12e 100644 --- a/plugins/sequence/package.json +++ b/plugins/sequence/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sequence", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 sequence adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/spreadsheet-view/package.json b/plugins/spreadsheet-view/package.json index b392a1ad95..863bf68337 100644 --- a/plugins/spreadsheet-view/package.json +++ b/plugins/spreadsheet-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-spreadsheet-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 spreadsheet view", "keywords": [ "jbrowse", @@ -36,7 +36,7 @@ "@babel/runtime": "^7.17.9", "@gmod/bgzf-filehandle": "^1.4.3", "@gmod/vcf": "^5.0.5", - "@jbrowse/plugin-variants": "^1.7.10", + "@jbrowse/plugin-variants": "^1.7.11", "@material-ui/icons": "^4.9.1", "csvtojson": "^2.0.10" }, diff --git a/plugins/sv-inspector/package.json b/plugins/sv-inspector/package.json index e7f1441ef0..6daee70649 100644 --- a/plugins/sv-inspector/package.json +++ b/plugins/sv-inspector/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-sv-inspector", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 SV inspector view", "keywords": [ "jbrowse", diff --git a/plugins/svg/package.json b/plugins/svg/package.json index 8961641fcd..4cef0ed46f 100644 --- a/plugins/svg/package.json +++ b/plugins/svg/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-svg", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 plugin for svg features", "keywords": [ "jbrowse", diff --git a/plugins/text-indexing/package.json b/plugins/text-indexing/package.json index 080648fced..48e0bcbf9c 100644 --- a/plugins/text-indexing/package.json +++ b/plugins/text-indexing/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-text-indexing", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 text indexing rpc method", "keywords": [ "jbrowse", @@ -34,7 +34,7 @@ }, "dependencies": { "@babel/runtime": "^7.17.9", - "@jbrowse/text-indexing": "^1.7.10", + "@jbrowse/text-indexing": "^1.7.11", "@material-ui/icons": "^4.9.1" }, "peerDependencies": { diff --git a/plugins/trackhub-registry/package.json b/plugins/trackhub-registry/package.json index c655e53bc3..58b0c151de 100644 --- a/plugins/trackhub-registry/package.json +++ b/plugins/trackhub-registry/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trackhub-registry", - "version": "1.7.10", + "version": "1.7.11", "description": "Add a connection to The Track Hub Registry", "keywords": [ "jbrowse", diff --git a/plugins/trix/package.json b/plugins/trix/package.json index 41cfaedefe..e7d22ba77c 100644 --- a/plugins/trix/package.json +++ b/plugins/trix/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-trix", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 trix text search adapter", "keywords": [ "jbrowse", diff --git a/plugins/variants/package.json b/plugins/variants/package.json index 2a3977b6fc..e860c57e90 100644 --- a/plugins/variants/package.json +++ b/plugins/variants/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-variants", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 variant adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/plugins/wiggle/package.json b/plugins/wiggle/package.json index e120006593..70d42d3b47 100644 --- a/plugins/wiggle/package.json +++ b/plugins/wiggle/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/plugin-wiggle", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 wiggle adapters, tracks, etc.", "keywords": [ "jbrowse", diff --git a/products/jbrowse-cli/README.md b/products/jbrowse-cli/README.md index 5714cb0d94..46167771cc 100644 --- a/products/jbrowse-cli/README.md +++ b/products/jbrowse-cli/README.md @@ -157,7 +157,7 @@ EXAMPLES $ jbrowse add-assembly myfile.fa.gz --load copy ``` -_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/add-assembly.ts)_ +_See code: [src/commands/add-assembly.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/add-assembly.ts)_ ## `jbrowse add-connection CONNECTIONURLORPATH` @@ -211,7 +211,7 @@ EXAMPLES /path/to/jb2/installation/config.json ``` -_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/add-connection.ts)_ +_See code: [src/commands/add-connection.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/add-connection.ts)_ ## `jbrowse add-track TRACK` @@ -285,7 +285,7 @@ EXAMPLES $ jbrowse add-track /url/relative/path.bam --load inPlace ``` -_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/add-track.ts)_ +_See code: [src/commands/add-track.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/add-track.ts)_ ## `jbrowse add-track-json TRACK` @@ -310,7 +310,7 @@ EXAMPLES $ jbrowse add-track-json track.json --update ``` -_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/add-track-json.ts)_ +_See code: [src/commands/add-track-json.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/add-track-json.ts)_ ## `jbrowse admin-server` @@ -340,7 +340,7 @@ EXAMPLES $ jbrowse admin-server -p 8888 ``` -_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/admin-server.ts)_ +_See code: [src/commands/admin-server.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/admin-server.ts)_ ## `jbrowse create LOCALPATH` @@ -384,7 +384,7 @@ EXAMPLES $ jbrowse create --listVersions ``` -_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/create.ts)_ +_See code: [src/commands/create.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/create.ts)_ ## `jbrowse help [COMMAND]` @@ -438,7 +438,7 @@ EXAMPLES $ jbrowse set-default-session --currentSession # Prints out current default session ``` -_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/set-default-session.ts)_ +_See code: [src/commands/set-default-session.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/set-default-session.ts)_ ## `jbrowse text-index` @@ -499,7 +499,7 @@ EXAMPLES $ jbrowse text-index --file myfile.gff3.gz --file myfile.vcfgz --out indexes ``` -_See code: [src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/text-index.ts)_ +_See code: [src/commands/text-index.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/text-index.ts)_ ## `jbrowse upgrade [LOCALPATH]` @@ -547,7 +547,7 @@ EXAMPLES $ jbrowse upgrade --nightly ``` -_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.10/products/jbrowse-cli/src/commands/upgrade.ts)_ +_See code: [src/commands/upgrade.ts](https://github.com/GMOD/jbrowse-components/blob/v1.7.11/products/jbrowse-cli/src/commands/upgrade.ts)_ diff --git a/products/jbrowse-cli/package.json b/products/jbrowse-cli/package.json index 910c3e8731..b1ff266f01 100644 --- a/products/jbrowse-cli/package.json +++ b/products/jbrowse-cli/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/cli", - "version": "1.7.10", + "version": "1.7.11", "description": "A command line tool for working with JBrowse 2", "keywords": [ "jbrowse", @@ -57,8 +57,8 @@ "ixixx": "^1.0.20", "json-parse-better-errors": "^1.0.2", "node-fetch": "^2.6.0", - "proxy-agent": "^5.0.0", "object.fromentries": "^2.0.5", + "proxy-agent": "^5.0.0", "rimraf": "^3.0.2", "tslib": "^2.3.1", "unzipper": "^0.10.11" diff --git a/products/jbrowse-desktop/package.json b/products/jbrowse-desktop/package.json index d61a1172bb..e73bfbc1ce 100644 --- a/products/jbrowse-desktop/package.json +++ b/products/jbrowse-desktop/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/desktop", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse desktop application specialized to inspect structural variants", "license": "Apache-2.0", "homepage": "./", @@ -43,38 +43,38 @@ "dependencies": { "@fontsource/roboto": "^4.5.0", "@gmod/faidx": "^1.0.1", - "@jbrowse/core": "^1.7.10", - "@jbrowse/plugin-alignments": "^1.7.10", - "@jbrowse/plugin-arc": "^1.7.10", - "@jbrowse/plugin-authentication": "^1.7.10", - "@jbrowse/plugin-bed": "^1.7.10", - "@jbrowse/plugin-breakpoint-split-view": "^1.7.10", - "@jbrowse/plugin-circular-view": "^1.7.10", - "@jbrowse/plugin-comparative-adapters": "^1.7.10", - "@jbrowse/plugin-config": "^1.7.10", - "@jbrowse/plugin-data-management": "^1.7.10", - "@jbrowse/plugin-dotplot-view": "^1.7.10", - "@jbrowse/plugin-gff3": "^1.7.10", - "@jbrowse/plugin-grid-bookmark": "^1.7.10", - "@jbrowse/plugin-gtf": "^1.7.10", - "@jbrowse/plugin-hic": "^1.7.10", - "@jbrowse/plugin-jobs-management": "^1.7.10", - "@jbrowse/plugin-legacy-jbrowse": "^1.7.10", - "@jbrowse/plugin-linear-comparative-view": "^1.7.10", - "@jbrowse/plugin-linear-genome-view": "^1.7.10", - "@jbrowse/plugin-lollipop": "^1.7.10", - "@jbrowse/plugin-menus": "^1.7.10", - "@jbrowse/plugin-rdf": "^1.7.10", - "@jbrowse/plugin-sequence": "^1.7.10", - "@jbrowse/plugin-spreadsheet-view": "^1.7.10", - "@jbrowse/plugin-sv-inspector": "^1.7.10", - "@jbrowse/plugin-svg": "^1.7.10", - "@jbrowse/plugin-text-indexing": "^1.7.10", - "@jbrowse/plugin-trackhub-registry": "^1.7.10", - "@jbrowse/plugin-trix": "^1.7.10", - "@jbrowse/plugin-variants": "^1.7.10", - "@jbrowse/plugin-wiggle": "^1.7.10", - "@jbrowse/text-indexing": "^1.7.10", + "@jbrowse/core": "^1.7.11", + "@jbrowse/plugin-alignments": "^1.7.11", + "@jbrowse/plugin-arc": "^1.7.11", + "@jbrowse/plugin-authentication": "^1.7.11", + "@jbrowse/plugin-bed": "^1.7.11", + "@jbrowse/plugin-breakpoint-split-view": "^1.7.11", + "@jbrowse/plugin-circular-view": "^1.7.11", + "@jbrowse/plugin-comparative-adapters": "^1.7.11", + "@jbrowse/plugin-config": "^1.7.11", + "@jbrowse/plugin-data-management": "^1.7.11", + "@jbrowse/plugin-dotplot-view": "^1.7.11", + "@jbrowse/plugin-gff3": "^1.7.11", + "@jbrowse/plugin-grid-bookmark": "^1.7.11", + "@jbrowse/plugin-gtf": "^1.7.11", + "@jbrowse/plugin-hic": "^1.7.11", + "@jbrowse/plugin-jobs-management": "^1.7.11", + "@jbrowse/plugin-legacy-jbrowse": "^1.7.11", + "@jbrowse/plugin-linear-comparative-view": "^1.7.11", + "@jbrowse/plugin-linear-genome-view": "^1.7.11", + "@jbrowse/plugin-lollipop": "^1.7.11", + "@jbrowse/plugin-menus": "^1.7.11", + "@jbrowse/plugin-rdf": "^1.7.11", + "@jbrowse/plugin-sequence": "^1.7.11", + "@jbrowse/plugin-spreadsheet-view": "^1.7.11", + "@jbrowse/plugin-sv-inspector": "^1.7.11", + "@jbrowse/plugin-svg": "^1.7.11", + "@jbrowse/plugin-text-indexing": "^1.7.11", + "@jbrowse/plugin-trackhub-registry": "^1.7.11", + "@jbrowse/plugin-trix": "^1.7.11", + "@jbrowse/plugin-variants": "^1.7.11", + "@jbrowse/plugin-wiggle": "^1.7.11", + "@jbrowse/text-indexing": "^1.7.11", "@material-ui/core": "^4.12.2", "@material-ui/icons": "^4.0.0", "@material-ui/lab": "^4.0.0-alpha.45", diff --git a/products/jbrowse-img/package.json b/products/jbrowse-img/package.json index 016b09e0f8..574dfb02ee 100644 --- a/products/jbrowse-img/package.json +++ b/products/jbrowse-img/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/img", - "version": "1.7.10", + "version": "1.7.11", "main": "index.js", "author": "JBrowse Team", "license": "Apache-2.0", @@ -29,11 +29,11 @@ }, "dependencies": { "@babel/runtime": "^7.17.9", - "@jbrowse/plugin-linear-genome-view": "^1.7.10", - "@jbrowse/react-linear-genome-view": "^1.7.10", + "@jbrowse/plugin-linear-genome-view": "^1.7.11", + "@jbrowse/react-linear-genome-view": "^1.7.11", "abortcontroller-polyfill": "^1.7.3", - "jsdom": "^19.0.0", "canvas": "^2.9.1", + "jsdom": "^19.0.0", "mobx": "^5.10.1", "node-fetch": "^2.6.7", "react": "^17.0.1", diff --git a/products/jbrowse-predefined-sessions/package.json b/products/jbrowse-predefined-sessions/package.json index a8366ccf98..68e1077737 100644 --- a/products/jbrowse-predefined-sessions/package.json +++ b/products/jbrowse-predefined-sessions/package.json @@ -1,6 +1,6 @@ { "name": "jbrowse-predefined-sessions", - "version": "1.7.10", + "version": "1.7.11", "main": "index.js", "author": "JBrowse Team", "license": "MIT", diff --git a/products/jbrowse-react-circular-genome-view/package.json b/products/jbrowse-react-circular-genome-view/package.json index e0b6552aee..8c6fc8d086 100644 --- a/products/jbrowse-react-circular-genome-view/package.json +++ b/products/jbrowse-react-circular-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-circular-genome-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 circular genome view React component", "keywords": [ "jbrowse", @@ -38,13 +38,13 @@ }, "dependencies": { "@babel/runtime": "^7.17.9", - "@jbrowse/core": "^1.7.10", - "@jbrowse/plugin-circular-view": "^1.7.10", - "@jbrowse/plugin-config": "^1.7.10", - "@jbrowse/plugin-data-management": "^1.7.10", - "@jbrowse/plugin-sequence": "^1.7.10", - "@jbrowse/plugin-variants": "^1.7.10", - "@jbrowse/plugin-wiggle": "^1.7.10", + "@jbrowse/core": "^1.7.11", + "@jbrowse/plugin-circular-view": "^1.7.11", + "@jbrowse/plugin-config": "^1.7.11", + "@jbrowse/plugin-data-management": "^1.7.11", + "@jbrowse/plugin-sequence": "^1.7.11", + "@jbrowse/plugin-variants": "^1.7.11", + "@jbrowse/plugin-wiggle": "^1.7.11", "@material-ui/core": "^4.12.2", "@material-ui/icons": "^4.0.0", "@material-ui/lab": "^4.0.0-alpha.45", diff --git a/products/jbrowse-react-linear-genome-view/package.json b/products/jbrowse-react-linear-genome-view/package.json index 93053a31b7..b491340972 100644 --- a/products/jbrowse-react-linear-genome-view/package.json +++ b/products/jbrowse-react-linear-genome-view/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/react-linear-genome-view", - "version": "1.7.10", + "version": "1.7.11", "description": "JBrowse 2 linear genome view React component", "keywords": [ "jbrowse", @@ -37,20 +37,20 @@ }, "dependencies": { "@babel/runtime": "^7.17.9", - "@jbrowse/core": "^1.7.10", - "@jbrowse/plugin-alignments": "^1.7.10", - "@jbrowse/plugin-bed": "^1.7.10", - "@jbrowse/plugin-circular-view": "^1.7.10", - "@jbrowse/plugin-config": "^1.7.10", - "@jbrowse/plugin-data-management": "^1.7.10", - "@jbrowse/plugin-gff3": "^1.7.10", - "@jbrowse/plugin-legacy-jbrowse": "^1.7.10", - "@jbrowse/plugin-linear-genome-view": "^1.7.10", - "@jbrowse/plugin-sequence": "^1.7.10", - "@jbrowse/plugin-svg": "^1.7.10", - "@jbrowse/plugin-trix": "^1.7.10", - "@jbrowse/plugin-variants": "^1.7.10", - "@jbrowse/plugin-wiggle": "^1.7.10", + "@jbrowse/core": "^1.7.11", + "@jbrowse/plugin-alignments": "^1.7.11", + "@jbrowse/plugin-bed": "^1.7.11", + "@jbrowse/plugin-circular-view": "^1.7.11", + "@jbrowse/plugin-config": "^1.7.11", + "@jbrowse/plugin-data-management": "^1.7.11", + "@jbrowse/plugin-gff3": "^1.7.11", + "@jbrowse/plugin-legacy-jbrowse": "^1.7.11", + "@jbrowse/plugin-linear-genome-view": "^1.7.11", + "@jbrowse/plugin-sequence": "^1.7.11", + "@jbrowse/plugin-svg": "^1.7.11", + "@jbrowse/plugin-trix": "^1.7.11", + "@jbrowse/plugin-variants": "^1.7.11", + "@jbrowse/plugin-wiggle": "^1.7.11", "@material-ui/core": "^4.12.2", "@material-ui/icons": "^4.0.0", "@material-ui/lab": "^4.0.0-alpha.45", diff --git a/products/jbrowse-web/package.json b/products/jbrowse-web/package.json index a9c02b879f..2c1c8318a5 100644 --- a/products/jbrowse-web/package.json +++ b/products/jbrowse-web/package.json @@ -1,6 +1,6 @@ { "name": "@jbrowse/web", - "version": "1.7.10", + "version": "1.7.11", "license": "Apache-2.0", "homepage": ".", "main": "build", @@ -18,35 +18,35 @@ }, "dependencies": { "@fontsource/roboto": "^4.5.0", - "@jbrowse/core": "^1.7.10", - "@jbrowse/plugin-alignments": "^1.7.10", - "@jbrowse/plugin-arc": "^1.7.10", - "@jbrowse/plugin-authentication": "^1.7.10", - "@jbrowse/plugin-bed": "^1.7.10", - "@jbrowse/plugin-breakpoint-split-view": "^1.7.10", - "@jbrowse/plugin-circular-view": "^1.7.10", - "@jbrowse/plugin-comparative-adapters": "^1.7.10", - "@jbrowse/plugin-config": "^1.7.10", - "@jbrowse/plugin-data-management": "^1.7.10", - "@jbrowse/plugin-dotplot-view": "^1.7.10", - "@jbrowse/plugin-gff3": "^1.7.10", - "@jbrowse/plugin-grid-bookmark": "^1.7.10", - "@jbrowse/plugin-gtf": "^1.7.10", - "@jbrowse/plugin-hic": "^1.7.10", - "@jbrowse/plugin-legacy-jbrowse": "^1.7.10", - "@jbrowse/plugin-linear-comparative-view": "^1.7.10", - "@jbrowse/plugin-linear-genome-view": "^1.7.10", - "@jbrowse/plugin-lollipop": "^1.7.10", - "@jbrowse/plugin-menus": "^1.7.10", - "@jbrowse/plugin-rdf": "^1.7.10", - "@jbrowse/plugin-sequence": "^1.7.10", - "@jbrowse/plugin-spreadsheet-view": "^1.7.10", - "@jbrowse/plugin-sv-inspector": "^1.7.10", - "@jbrowse/plugin-svg": "^1.7.10", - "@jbrowse/plugin-trackhub-registry": "^1.7.10", - "@jbrowse/plugin-trix": "^1.7.10", - "@jbrowse/plugin-variants": "^1.7.10", - "@jbrowse/plugin-wiggle": "^1.7.10", + "@jbrowse/core": "^1.7.11", + "@jbrowse/plugin-alignments": "^1.7.11", + "@jbrowse/plugin-arc": "^1.7.11", + "@jbrowse/plugin-authentication": "^1.7.11", + "@jbrowse/plugin-bed": "^1.7.11", + "@jbrowse/plugin-breakpoint-split-view": "^1.7.11", + "@jbrowse/plugin-circular-view": "^1.7.11", + "@jbrowse/plugin-comparative-adapters": "^1.7.11", + "@jbrowse/plugin-config": "^1.7.11", + "@jbrowse/plugin-data-management": "^1.7.11", + "@jbrowse/plugin-dotplot-view": "^1.7.11", + "@jbrowse/plugin-gff3": "^1.7.11", + "@jbrowse/plugin-grid-bookmark": "^1.7.11", + "@jbrowse/plugin-gtf": "^1.7.11", + "@jbrowse/plugin-hic": "^1.7.11", + "@jbrowse/plugin-legacy-jbrowse": "^1.7.11", + "@jbrowse/plugin-linear-comparative-view": "^1.7.11", + "@jbrowse/plugin-linear-genome-view": "^1.7.11", + "@jbrowse/plugin-lollipop": "^1.7.11", + "@jbrowse/plugin-menus": "^1.7.11", + "@jbrowse/plugin-rdf": "^1.7.11", + "@jbrowse/plugin-sequence": "^1.7.11", + "@jbrowse/plugin-spreadsheet-view": "^1.7.11", + "@jbrowse/plugin-sv-inspector": "^1.7.11", + "@jbrowse/plugin-svg": "^1.7.11", + "@jbrowse/plugin-trackhub-registry": "^1.7.11", + "@jbrowse/plugin-trix": "^1.7.11", + "@jbrowse/plugin-variants": "^1.7.11", + "@jbrowse/plugin-wiggle": "^1.7.11", "@material-ui/core": "^4.12.2", "@material-ui/icons": "^4.0.0", "@material-ui/lab": "^4.0.0-alpha.56",