From 49e70e2ec2598103add8b8cfd3d291b7fa460cf3 Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Fri, 11 Aug 2023 21:09:29 -0400 Subject: [PATCH 1/6] updated snap-bbox --- package.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/package.json b/package.json index dee2439..9dabd5c 100644 --- a/package.json +++ b/package.json @@ -76,7 +76,7 @@ "quick-resolve": "^0.0.1", "reproject-bbox": "^0.12.0", "reproject-geojson": "^0.3.0", - "snap-bbox": "^0.4.1", + "snap-bbox": "^0.5.0", "terraformer-arcgis-parser": "^1.1.0", "underscore": "^1.13.6", "xdim": "^1.10.1" From 385422b8ce5d26c5d87235b0630efcab4640b83b Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Fri, 11 Aug 2023 22:58:52 -0400 Subject: [PATCH 2/6] fixed edge case --- .gitignore | 2 +- data/antimeridian/split.dbf | Bin 0 -> 78 bytes data/antimeridian/split.geojson | 63 ++++++++++++++++++ data/antimeridian/split.prj | 1 + data/antimeridian/split.shp | Bin 0 -> 320 bytes data/antimeridian/split.shx | Bin 0 -> 108 bytes data/create_expected_truth_data.py | 5 +- data/expected_data.txt | 25 +++++-- data/gfwfiji_6933_COG_Binary.tif | Bin 0 -> 915012 bytes .../santa-maria-mpa-offset.geojson | 1 + data/santa-maria/santa-maria-mpa.geojson | 1 + .../intersect-polygon.module.js | 15 ++++- .../intersect-polygon.test.js | 23 ++++++- src/stats/stats.test.js | 19 +++++- 14 files changed, 143 insertions(+), 12 deletions(-) create mode 100644 data/antimeridian/split.dbf create mode 100644 data/antimeridian/split.geojson create mode 100644 data/antimeridian/split.prj create mode 100644 data/antimeridian/split.shp create mode 100644 data/antimeridian/split.shx create mode 100644 data/gfwfiji_6933_COG_Binary.tif create mode 100644 data/santa-maria/santa-maria-mpa-offset.geojson create mode 100644 data/santa-maria/santa-maria-mpa.geojson diff --git a/.gitignore b/.gitignore index 3662213..4da8067 100644 --- a/.gitignore +++ b/.gitignore @@ -64,7 +64,7 @@ typings/ *.swp # temporary backups -*.bak +*bak* # 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Protected","formElementId":2987,"alternateLanguages":{"pt":{"label":"Designação","valueLabel":"Altamente Protegido"}}},{"label":"Island","value":["SANTA_MARIA"],"exportId":"island","fieldType":"MultipleChoice","valueLabel":["Santa Maria"],"formElementId":2990,"alternateLanguages":{"pt":{"label":"Ilha","valueLabel":["Santa Maria"]}}}]}} \ No newline at end of file diff --git a/src/intersect-polygon/intersect-polygon.module.js b/src/intersect-polygon/intersect-polygon.module.js index 836750b..ae337fa 100644 --- a/src/intersect-polygon/intersect-polygon.module.js +++ b/src/intersect-polygon/intersect-polygon.module.js @@ -1,3 +1,4 @@ +import booleanIntersects from "bbox-fns/boolean-intersects.js"; import calcBoundingBox from "bbox-fns/calc.js"; import dufour_peyton_intersection from "dufour-peyton-intersection"; import snap from "snap-bbox"; @@ -10,6 +11,8 @@ const { resolve } = utils; const intersectPolygon = (georaster, geometry, perPixelFunction) => { const { noDataValue } = georaster; + const georaster_bbox = [georaster.xmin, georaster.ymin, georaster.xmax, georaster.ymax]; + const precisePixelHeight = georaster.pixelHeight.toString(); const precisePixelWidth = georaster.pixelWidth.toString(); @@ -29,7 +32,7 @@ const intersectPolygon = (georaster, geometry, perPixelFunction) => { // so using the whole georaster bbox, shouldn't significantly more operations intersections = dufour_peyton_intersection.calculate({ debug: false, - raster_bbox: [georaster.xmin, georaster.ymin, georaster.xmax, georaster.ymax], + raster_bbox: georaster_bbox, raster_height: georaster.height, raster_width: georaster.width, pixel_height: georaster.pixelHeight, @@ -37,14 +40,20 @@ const intersectPolygon = (georaster, geometry, perPixelFunction) => { geometry }); } else if (georaster.getValues) { - const [xmin, ymin, xmax, ymax] = calcBoundingBox(geometry); + const geometry_bbox = calcBoundingBox(geometry); + + if (!booleanIntersects(geometry_bbox, georaster_bbox)) return; + + const [xmin, ymin, xmax, ymax] = geometry_bbox; // snap geometry bounding box to georaster grid system const snapResult = snap({ bbox: [xmin.toString(), ymin.toString(), xmax.toString(), ymax.toString()], - container: [georaster.xmin.toString(), georaster.ymin.toString(), georaster.xmax.toString(), georaster.ymax.toString()], + debug: false, origin: [georaster.xmin.toString(), georaster.ymax.toString()], + overflow: false, scale: [precisePixelWidth, "-" + precisePixelHeight], + size: [georaster.width.toString(), georaster.height.toString()], precise: true }); diff --git a/src/intersect-polygon/intersect-polygon.test.js b/src/intersect-polygon/intersect-polygon.test.js index 491a96f..a6adb26 100644 --- a/src/intersect-polygon/intersect-polygon.test.js +++ b/src/intersect-polygon/intersect-polygon.test.js @@ -1,4 +1,5 @@ import test from "flug"; +import fetch from "cross-fetch"; import { serve } from "srvd"; import parseGeoraster from "georaster"; import bboxPolygon from "@turf/bbox-polygon"; @@ -23,7 +24,7 @@ async function fetch_json(url) { } } -serve({ debug: true, max: 11, port: 3000, wait: 60 }); +serve({ debug: true, max: 13, port: 3000, wait: 60 }); const urlToGeojson = "http://localhost:3000/data/gadm/geojsons/Akrotiri and Dhekelia.geojson"; @@ -156,3 +157,23 @@ test("antimerdian #1", async ({ eq }) => { // same as rasterstats eq(numberOfIntersectingPixels, 314_930); }); + +test("parse", async ({ eq }) => { + const georaster = await parse(urlToData + "geotiff-test-data/gfw-azores.tif"); + const geojson = await fetch_json(urlToData + "santa-maria/santa-maria-mpa.geojson"); + let numberOfIntersectingPixels = 0; + const geom = convertMultiPolygon(geojson); + await intersectPolygon(georaster, geom, () => numberOfIntersectingPixels++); + // same as rasterstats + eq(numberOfIntersectingPixels, 2); +}); + +test("parse no overlap", async ({ eq }) => { + const georaster = await parse(urlToData + "geotiff-test-data/gfw-azores.tif"); + const geojson = await fetch_json(urlToData + "santa-maria/santa-maria-mpa-offset.geojson"); + let numberOfIntersectingPixels = 0; + const geom = convertMultiPolygon(geojson); + await intersectPolygon(georaster, geom, () => numberOfIntersectingPixels++); + // same as rasterstats + eq(numberOfIntersectingPixels, 0); +}); diff --git a/src/stats/stats.test.js b/src/stats/stats.test.js index 88369d3..70517b9 100644 --- a/src/stats/stats.test.js +++ b/src/stats/stats.test.js @@ -10,7 +10,7 @@ import load from "../load"; import parse from "../parse"; import stats from "./stats.module"; -serve({ debug: true, max: 8, port: 3000, wait: 240 }); +serve({ debug: true, max: 25, port: 3000, wait: 240 }); const url = "http://localhost:3000/data/test.tiff"; @@ -171,3 +171,20 @@ test("antimerdian #1", async ({ eq }) => { const results = await stats(georaster, geom, { stats: ["count", "min", "max", "sum"] }); eq(results, [{ count: 314_930, min: 0.20847222208976746, max: 492.3219299316406, sum: 12_783_872.545041203 }]); }); + +test("antimerdian #2 (split at antimeridian)", async ({ eq }) => { + // converted GeoTIFF to all 1's + const georaster = await parse("http://localhost:3000/data/gfwfiji_6933_COG_Binary.tif"); + let geom = JSON.parse(readFileSync("./data/antimeridian/split.geojson", "utf-8")); + geom = reprojectGeoJSON(geom, { from: 4326, to: georaster.projection }); + const results = await stats(georaster, geom, { stats: ["count", "min", "max", "sum"] }); + eq(results, [{ count: 327_972, min: 1, max: 1, sum: 327_972 }]); +}); + +test("edge", async ({ eq }) => { + // converted GeoTIFF to all 1's + const georaster = await parse("http://localhost:3000/data/geotiff-test-data/gfw-azores.tif"); + const geojson = JSON.parse(readFileSync("./data/santa-maria/santa-maria-mpa.geojson", "utf-8")); + const results = await stats(georaster, geojson, { stats: ["count", "min", "max", "sum"] }); + eq(results, [{ count: 2, min: 9.936111450195312, max: 19.24805450439453, sum: 29.184165954589844 }]); +}); From 28de1d20563f69069714cc756b0d466f5a92d6f2 Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Sat, 12 Aug 2023 09:23:16 -0400 Subject: [PATCH 3/6] increased number of serves in intersect polygon test --- src/intersect-polygon/intersect-polygon.test.js | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/intersect-polygon/intersect-polygon.test.js b/src/intersect-polygon/intersect-polygon.test.js index a6adb26..6b8e86d 100644 --- a/src/intersect-polygon/intersect-polygon.test.js +++ b/src/intersect-polygon/intersect-polygon.test.js @@ -24,7 +24,7 @@ async function fetch_json(url) { } } -serve({ debug: true, max: 13, port: 3000, wait: 60 }); +serve({ debug: true, max: 19, port: 3000, wait: 60 }); const urlToGeojson = "http://localhost:3000/data/gadm/geojsons/Akrotiri and Dhekelia.geojson"; From 7529a419b2cb47d99cdc75844d58d7d0585ae561 Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Sat, 12 Aug 2023 09:41:09 -0400 Subject: [PATCH 4/6] updated calc-stats --- package.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/package.json b/package.json index 9dabd5c..48e0f71 100644 --- a/package.json +++ b/package.json @@ -60,7 +60,7 @@ "@turf/boolean-clockwise": "^6.5.0", "@turf/combine": "^6.5.0", "bbox-fns": "^0.13.0", - "calc-stats": "^2.1.0", + "calc-stats": "^2.2.0", "cross-fetch": "^3.1.6", "dufour-peyton-intersection": "0.2.0", "fast-max": "^0.4.0", From dcd58dfe4d41fd7f7016af377af8d485ae72596d Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Sat, 12 Aug 2023 09:49:08 -0400 Subject: [PATCH 5/6] updated cross-fetch, georaster, and mathjs --- package.json | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/package.json b/package.json index 48e0f71..811e187 100644 --- a/package.json +++ b/package.json @@ -61,14 +61,14 @@ "@turf/combine": "^6.5.0", "bbox-fns": "^0.13.0", "calc-stats": "^2.2.0", - "cross-fetch": "^3.1.6", + "cross-fetch": "^4.0.0", "dufour-peyton-intersection": "0.2.0", "fast-max": "^0.4.0", "fast-min": "^0.3.0", "faster-median": "^1.0.0", - "georaster": "^1.5.6", + "georaster": "^1.6.0", "get-depth": "^0.0.3", - "mathjs": "^11.8.0", + "mathjs": "^11.9.1", "mpoly": "^0.2.0", "preciso": "^0.12.0", "proj4": "^2.9.0", From 585c3a7618d902b580897424ad341af40ff044f0 Mon Sep 17 00:00:00 2001 From: DanielJDufour Date: Sat, 12 Aug 2023 10:06:40 -0400 Subject: [PATCH 6/6] added product to stats tests after updating calc-stats --- src/stats/stats.test.js | 3 +++ 1 file changed, 3 insertions(+) diff --git a/src/stats/stats.test.js b/src/stats/stats.test.js index 70517b9..949a41f 100644 --- a/src/stats/stats.test.js +++ b/src/stats/stats.test.js @@ -28,6 +28,7 @@ const EXPECTED_RASTER_STATS = [ min: 0, mode: 0, modes: [0], + product: 0, range: 8131.2, std: 562.8169687364914, sum: 108343045.39997534, @@ -46,6 +47,7 @@ const EXPECTED_BBOX_STATS = [ min: 0, mode: 0, modes: [0], + product: 0, range: 5166.7, std: 1216.4677587709607, sum: 236435.4, @@ -64,6 +66,7 @@ const EXPECTED_POLYGON_STATS = [ min: 0, mode: 0, modes: [0], + product: 0, range: 7807.4, std: 1507.3255322956486, sum: 3_099_403.799999996, // rasterstats says 3,099,403.8