From 97bb10101fca48b216a3452c7697c7a364962205 Mon Sep 17 00:00:00 2001 From: simon Date: Mon, 2 Oct 2023 15:01:04 +0200 Subject: [PATCH 1/7] Add Pipfiles with dependencies Pipfiles are created as standard by pipenv and contain the dependencies for running the project. --- Pipfile | 16 ++ Pipfile.lock | 570 +++++++++++++++++++++++++++++++++++++++++++++++++++ 2 files changed, 586 insertions(+) create mode 100644 Pipfile create mode 100644 Pipfile.lock diff --git a/Pipfile b/Pipfile new file mode 100644 index 0000000..2adfab2 --- /dev/null +++ b/Pipfile @@ -0,0 +1,16 @@ +[[source]] +url = "https://pypi.org/simple" +verify_ssl = true +name = "pypi" + +[packages] +ruff = "*" +pycodestyle = "*" +numpy = "*" +matplotlib = "*" +astropy = "*" + +[dev-packages] + +[requires] +python_version = "3.11" diff --git a/Pipfile.lock b/Pipfile.lock new file mode 100644 index 0000000..17db72d --- /dev/null +++ b/Pipfile.lock @@ -0,0 +1,570 @@ +{ + "_meta": { + "hash": { + "sha256": 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There are two dependencies on RISE currently, the regular `rise` that is used with Jupyter Notebook < 7 and `jupyterlab-rise` which is used with Jupyter Notebook >= 7 and JupyterLab. --- Pipfile | 4 + Pipfile.lock | 270 ++++++++++++++++++++++++++++++++++++++++++++++++++- 2 files changed, 273 insertions(+), 1 deletion(-) diff --git a/Pipfile b/Pipfile index d6c8cae..7a6836c 100644 --- a/Pipfile +++ b/Pipfile @@ -9,6 +9,10 @@ numpy = "*" matplotlib = "*" astropy = "*" rise = "*" +ipytest = "*" +py-heat-magic = "*" +line-profiler = "*" +jupyterlab-rise = "*" [dev-packages] diff --git a/Pipfile.lock b/Pipfile.lock index a68a161..68d2347 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "42c02ff71d1e2319f5c858d93bc2e0dd43e6917277b57df6990952ce210a0f3b" + "sha256": "f82b1f553f640852c211236be5408015bf9b6d8138d302bf4f7d680cb07f65ce" }, "pipfile-spec": 6, "requires": {}, @@ -507,6 +507,14 @@ "markers": "python_version >= '3.5'", "version": "==3.4" }, + "iniconfig": { + "hashes": [ + "sha256:2d91e135bf72d31a410b17c16da610a82cb55f6b0477d1a902134b24a455b8b3", + "sha256:b6a85871a79d2e3b22d2d1b94ac2824226a63c6b741c88f7ae975f18b6778374" + ], + "markers": "python_version >= '3.7'", + "version": "==2.0.0" + }, "ipykernel": { "hashes": [ "sha256:2e2ee359baba19f10251b99415bb39de1e97d04e1fab385646f24f0596510b77", @@ -515,6 +523,14 @@ "markers": "python_version >= '3.8'", "version": "==6.25.2" }, + "ipytest": { + "hashes": [ + "sha256:a40e29a325a0d95190b083b6f9d281ef3bc1095210130ec0d779bf95215f44dd", + "sha256:e8eae2bb21eb313f5ea353d5cfcb4843d5b35266732b6345ec4fd714ba60bceb" + ], + "index": "pypi", + "version": "==0.13.3" + }, "ipython": { "hashes": [ "sha256:0852469d4d579d9cd613c220af7bf0c9cc251813e12be647cb9d463939db9b1e", @@ -523,6 +539,21 @@ "markers": "python_version >= '3.9'", "version": "==8.16.1" }, + "ipython-genutils": { + "hashes": [ + "sha256:72dd37233799e619666c9f639a9da83c34013a73e8bbc79a7a6348d93c61fab8", + 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"sha256:bae66a2d7d5768eaa33008fa5a974389f167183c87bf39160d3fefe6664f8ddc", + "sha256:bba4d955f54edd61899776bad459bf7326e14b9fa1c552181f0479cc60a568cd", + "sha256:c77da50c9a91e23beb63c2a711ef9e9ca9a2060442757dffee34ea41847d8156", + "sha256:d2f6dee6cbb0e263b8142ed587bc93e3ed5e777f1f75448d24fb923d9fd4dce6", + "sha256:dfcc1552add7cb7c13fb70efcb2389d0624d571aaf2c80b04117e2755a0c5d15", + "sha256:e04aa19acc324a1a076abb4035dabe9b64badb19f76ad9c798bde39d41025cdc", + "sha256:e1f97cd89c0fe1a0685f8f89d85fa305deb3067d0668151571ba50913e445820" + ], + "markers": "python_version < '3.13' and python_version >= '3.9'", + "version": "==1.11.3" + }, "send2trash": { "hashes": [ "sha256:a384719d99c07ce1eefd6905d2decb6f8b7ed054025bb0e618919f945de4f679", @@ -1546,6 +1790,14 @@ ], "version": "==0.6.3" }, + "sympy": { + "hashes": [ + "sha256:c3588cd4295d0c0f603d0f2ae780587e64e2efeedb3521e46b9bb1d08d184fa5", + "sha256:ebf595c8dac3e0fdc4152c51878b498396ec7f30e7a914d6071e674d49420fb8" + ], + "markers": "python_version >= '3.8'", + "version": "==1.12" + }, "terminado": { "hashes": [ "sha256:6ccbbcd3a4f8a25a5ec04991f39a0b8db52dfcd487ea0e578d977e6752380333", @@ -1594,6 +1846,14 @@ ], "version": "==2.8.19.14" }, + "tzdata": { + "hashes": [ + "sha256:11ef1e08e54acb0d4f95bdb1be05da659673de4acbd21bf9c69e94cc5e907a3a", + "sha256:7e65763eef3120314099b6939b5546db7adce1e7d6f2e179e3df563c70511eda" + ], + "markers": "python_version >= '2'", + "version": "==2023.3" + }, "uri-template": { "hashes": [ "sha256:0e00f8eb65e18c7de20d595a14336e9f337ead580c70934141624b6d1ffdacc7", @@ -1637,6 +1897,14 @@ ], "markers": "python_version >= '3.8'", "version": "==1.6.4" + }, + "widgetsnbextension": { + "hashes": [ + "sha256:3c1f5e46dc1166dfd40a42d685e6a51396fd34ff878742a3e47c6f0cc4a2a385", + "sha256:91452ca8445beb805792f206e560c1769284267a30ceb1cec9f5bcc887d15175" + ], + "markers": "python_version >= '3.7'", + "version": "==4.0.9" } }, "develop": {} From f54822e42974a1581fdc61e0290c35a030ecaa69 Mon Sep 17 00:00:00 2001 From: simon Date: Thu, 26 Oct 2023 17:34:38 +0200 Subject: [PATCH 5/7] Remove ruff It is being handled as a system level dependency instead. --- Pipfile | 1 - Pipfile.lock | 73 ++++++++++++++++++---------------------------------- 2 files changed, 25 insertions(+), 49 deletions(-) diff --git a/Pipfile b/Pipfile index 7a6836c..a4b4475 100644 --- a/Pipfile +++ b/Pipfile @@ -4,7 +4,6 @@ verify_ssl = true name = "pypi" [packages] -ruff = "*" numpy = "*" matplotlib = "*" astropy = "*" diff --git a/Pipfile.lock b/Pipfile.lock index 68d2347..8166fef 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "f82b1f553f640852c211236be5408015bf9b6d8138d302bf4f7d680cb07f65ce" + "sha256": "754b1113858efba583a6ce41f62df240bc16d7ad5808f7ebc12d66775f3b7a2a" }, "pipfile-spec": 6, "requires": {}, @@ -102,10 +102,10 @@ }, "asttokens": { "hashes": [ - "sha256:2e0171b991b2c959acc6c49318049236844a5da1d65ba2672c4880c1c894834e", - "sha256:cf8fc9e61a86461aa9fb161a14a0841a03c405fa829ac6b202670b3495d2ce69" + "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24", + "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0" ], - "version": "==2.4.0" + "version": "==2.4.1" }, "async-lru": { "hashes": [ @@ -125,11 +125,11 @@ }, "babel": { "hashes": [ - "sha256:04c3e2d28d2b7681644508f836be388ae49e0cfe91465095340395b60d00f210", - "sha256:fbfcae1575ff78e26c7449136f1abbefc3c13ce542eeb13d43d50d8b047216ec" + "sha256:33e0952d7dd6374af8dbf6768cc4ddf3ccfefc244f9986d4074704f2fbd18900", + "sha256:7077a4984b02b6727ac10f1f7294484f737443d7e2e66c5e4380e41a3ae0b4ed" ], "markers": "python_version >= '3.7'", - "version": "==2.13.0" + "version": "==2.13.1" }, "backcall": { "hashes": [ @@ -517,11 +517,11 @@ }, "ipykernel": { "hashes": [ - "sha256:2e2ee359baba19f10251b99415bb39de1e97d04e1fab385646f24f0596510b77", - "sha256:f468ddd1f17acb48c8ce67fcfa49ba6d46d4f9ac0438c1f441be7c3d1372230b" + "sha256:3ba3dc97424b87b31bb46586b5167b3161b32d7820b9201a9e698c71e271602c", + "sha256:553856658eb8430bbe9653ea041a41bff63e9606fc4628873fc92a6cf3abd404" ], "markers": "python_version >= '3.8'", - "version": "==6.25.2" + "version": "==6.26.0" }, "ipytest": { "hashes": [ @@ -620,11 +620,11 @@ }, "jupyter-client": { "hashes": [ - "sha256:6a2a950ec23a8f62f9e4c66acec7f0ea6c7d1f80ba0992e747b10c56ce2e6dbe", - "sha256:dc1b857d5d7d76ac101766c6e9b646bf18742721126e72e5d484c75a993cada2" + "sha256:c3877aac7257ec68d79b5c622ce986bd2a992ca42f6ddc9b4dd1da50e89f7028", + "sha256:e8754066510ce456358df363f97eae64b50860f30dc1fe8c6771440db3be9a63" ], "markers": "python_version >= '3.8'", - "version": "==8.4.0" + "version": "==8.5.0" }, "jupyter-console": { "hashes": [ @@ -660,11 +660,11 @@ }, "jupyter-server": { "hashes": [ - "sha256:b11e2ba80667c75f55630faf8ac3d5809f8734f9006d65cce117c46a0a516ab8", - "sha256:c57270faa6530393ae69783a2d2f1874c718b9f109080581ea076b05713249fa" + "sha256:21ad1a3d455d5a79ce4bef5201925cd17510c17898cf9d54e3ccfb6b12734948", + "sha256:9ba71be4b9c16e479e4c50c929f8ac4b1015baf90237a08681397a98c76c7e5e" ], "markers": "python_version >= '3.8'", - "version": "==2.8.0" + "version": "==2.9.1" }, "jupyter-server-terminals": { "hashes": [ @@ -1352,11 +1352,11 @@ }, "pytest": { "hashes": [ - "sha256:1d881c6124e08ff0a1bb75ba3ec0bfd8b5354a01c194ddd5a0a870a48d99b002", - "sha256:a766259cfab564a2ad52cb1aae1b881a75c3eb7e34ca3779697c23ed47c47069" + "sha256:0d009c083ea859a71b76adf7c1d502e4bc170b80a8ef002da5806527b9591fac", + "sha256:d989d136982de4e3b29dabcc838ad581c64e8ed52c11fbe86ddebd9da0818cd5" ], "markers": "python_version >= '3.7'", - "version": "==7.4.2" + "version": "==7.4.3" }, "python-dateutil": { "hashes": [ @@ -1546,11 +1546,11 @@ }, "qtpy": { "hashes": [ - "sha256:4d4f045a41e09ac9fa57fcb47ef05781aa5af294a0a646acc1b729d14225e741", - "sha256:db2d508167aa6106781565c8da5c6f1487debacba33519cedc35fa8997d424d4" + "sha256:1c1d8c4fa2c884ae742b069151b0abe15b3f70491f3972698c683b8e38de839b", + "sha256:a5a15ffd519550a1361bdc56ffc07fda56a6af7292f17c7b395d4083af632987" ], "markers": "python_version >= '3.7'", - "version": "==2.4.0" + "version": "==2.4.1" }, "referencing": { "hashes": [ @@ -1697,29 +1697,6 @@ "markers": "python_version >= '3.8'", "version": "==0.10.6" }, - "ruff": { - "hashes": [ - "sha256:2a909d3930afdbc2e9fd893b0034479e90e7981791879aab50ce3d9f55205bd6", - "sha256:2d68367d1379a6b47e61bc9de144a47bcdb1aad7903bbf256e4c3d31f11a87ae", - "sha256:3305d1cb4eb8ff6d3e63a48d1659d20aab43b49fe987b3ca4900528342367145", - "sha256:3521bf910104bf781e6753282282acc145cbe3eff79a1ce6b920404cd756075a", - "sha256:3ff3006c97d9dc396b87fb46bb65818e614ad0181f059322df82bbfe6944e264", - "sha256:620d4b34302538dbd8bbbe8fdb8e8f98d72d29bd47e972e2b59ce6c1e8862257", - "sha256:6aa7e63c3852cf8fe62698aef31e563e97143a4b801b57f920012d0e07049a8d", - "sha256:8f5b24daddf35b6c207619301170cae5d2699955829cda77b6ce1e5fc69340df", - "sha256:b7cdc893aef23ccc14c54bd79a8109a82a2c527e11d030b62201d86f6c2b81c5", - "sha256:ba3208543ab91d3e4032db2652dcb6c22a25787b85b8dc3aeff084afdc612e5c", - "sha256:bc11955f6ce3398d2afe81ad7e49d0ebf0a581d8bcb27b8c300281737735e3a3", - "sha256:c34ae501d0ec71acf19ee5d4d889e379863dcc4b796bf8ce2934a9357dc31db7", - "sha256:c90461ae4abec261609e5ea436de4a4b5f2822921cf04c16d2cc9327182dbbcc", - "sha256:cbbd8eead88ea83a250499074e2a8e9d80975f0b324b1e2e679e4594da318c25", - "sha256:d3f9ac658ba29e07b95c80fa742b059a55aefffa8b1e078bc3c08768bdd4b11a", - "sha256:e140bd717c49164c8feb4f65c644046fe929c46f42493672853e3213d7bdbce2", - "sha256:f4780e2bb52f3863a565ec3f699319d3493b83ff95ebbb4993e59c62aaf6e75e" - ], - "index": "pypi", - "version": "==0.1.1" - }, "scipy": { "hashes": [ "sha256:00f325434b6424952fbb636506f0567898dca7b0f7654d48f1c382ea338ce9a3", @@ -1833,11 +1810,11 @@ }, "traitlets": { "hashes": [ - "sha256:7564b5bf8d38c40fa45498072bf4dc5e8346eb087bbf1e2ae2d8774f6a0f078e", - "sha256:98277f247f18b2c5cabaf4af369187754f4fb0e85911d473f72329db8a7f4fae" + "sha256:81539f07f7aebcde2e4b5ab76727f53eabf18ad155c6ed7979a681411602fa47", + "sha256:833273bf645d8ce31dcb613c56999e2e055b1ffe6d09168a164bcd91c36d5d35" ], "markers": "python_version >= '3.8'", - "version": "==5.11.2" + "version": "==5.12.0" }, "types-python-dateutil": { "hashes": [ From 4f359314ead956dd426e1d21e3c21e418fd3ce4f Mon Sep 17 00:00:00 2001 From: simon Date: Thu, 9 Nov 2023 10:23:42 +0100 Subject: [PATCH 6/7] Add tqdm and `black `black` has the jupyter extras and is listed as a devel dependency since it is not used or demonstrated at runtime. --- Pipfile | 2 + Pipfile.lock | 1105 +++++++++++++++++++++++++++++--------------------- 2 files changed, 652 insertions(+), 455 deletions(-) diff --git a/Pipfile b/Pipfile index a4b4475..2979019 100644 --- a/Pipfile +++ b/Pipfile @@ -12,7 +12,9 @@ ipytest = "*" py-heat-magic = "*" line-profiler = "*" jupyterlab-rise = "*" +tqdm = "*" [dev-packages] +black = {extras = ["jupyter"], version = "*"} [requires] diff --git a/Pipfile.lock b/Pipfile.lock index 8166fef..c0a9b45 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "754b1113858efba583a6ce41f62df240bc16d7ad5808f7ebc12d66775f3b7a2a" + "sha256": "33bb8fcb39e0ea8234d02fe639c97bf41d245fb9e3351e20db8121cb52734645" }, "pipfile-spec": 6, "requires": {}, @@ -131,13 +131,6 @@ "markers": "python_version >= '3.7'", "version": "==2.13.1" }, - "backcall": { - "hashes": [ - "sha256:5cbdbf27be5e7cfadb448baf0aa95508f91f2bbc6c6437cd9cd06e2a4c215e1e", - "sha256:fbbce6a29f263178a1f7915c1940bde0ec2b2a967566fe1c65c1dfb7422bd255" - ], - "version": "==0.2.0" - }, "beautifulsoup4": { "hashes": [ "sha256:492bbc69dca35d12daac71c4db1bfff0c876c00ef4a2ffacce226d4638eb72da", @@ -222,165 +215,157 @@ }, "charset-normalizer": { "hashes": [ - "sha256:06cf46bdff72f58645434d467bf5228080801298fbba19fe268a01b4534467f5", - 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