diff --git a/CAT_pack/prepare.py b/CAT_pack/prepare.py index c62b311..dee47f5 100644 --- a/CAT_pack/prepare.py +++ b/CAT_pack/prepare.py @@ -42,10 +42,20 @@ def parse_arguments(): 'files that do not exist yet.')) optional = parser.add_argument_group('Optional arguments') - shared.add_argument(optional, 'database_folder', False, - default='./CAT_database.{0}'.format(date)) - shared.add_argument(optional, 'taxonomy_folder', False, - default='./CAT_taxonomy.{0}'.format(date)) + shared.add_argument( + optional, + 'database_folder', + False, + default='./CAT_database.{0}'.format(date), + help_=('Name of folder to which database files will be written ' + '(default: CAT_database.{date})')) + shared.add_argument( + optional, + 'taxonomy_folder', + False, + default='./CAT_taxonomy.{0}'.format(date), + help_=('Name of folder to which taxonomy files will be downloaded ' + '(default: CAT_taxonomy.{date})')) shared.add_argument(optional, 'path_to_diamond', False, default='diamond') shared.add_argument(optional, 'quiet', False) shared.add_argument(optional, 'verbose', False)