v0.4.1

What's Changed

• Fixes for the latest cluster plotter and latest napari by @thorstenwagner in #34

Full Changelog: v0.4.0...v0.4.1

v0.4.0

This releases introduces an target manager and the option to recalculate the umap for a specific cluster.

What's Changed

• Visualize targets after clusters were selected by @thorstenwagner in #29
• UMAP Recalculation: New option to recalculate UMAP for selected clusters by @thorstenwagner in #28
• Update napari 0.4.19 by @thorstenwagner in #30 https://github.com/MPI-
• New target manager by @thorstenwagner in #32

Full Changelog: v0.3.1...v0.4.0

v0.3.1

What's Changed

• Hotfix: ROI-Circle was placed wrongly as the label layer was invisible by default by @thorstenwagner in #27

Full Changelog: v0.3.0...v0.3.1

v0.3.0

What's Changed

• No freezing GUI when loading umap / writing targers by adding threading + Visualize loading with spinners by @thorstenwagner in #20
• Calculate label mask within napari-tomotwin by @thorstenwagner in #22
• Faster medoid calculation by @thorstenwagner in #23
• Metadata are now read from the umap by @thorstenwagner in #24 #25 #26

Full Changelog: v0.2.5...v0.3.0

v0.2.5

What's Changed

• Fix a bug when calculating recursive umaps by @thorstenwagner in #19

Full Changelog: v0.2.4...v0.2.5

v0.2.4

What's Changed

This release fixes a critical bug in the medoid calculation when using the umap workflow:

• Target calculation corrupted when index column is present by @thorstenwagner in #18

Without this fix, the medoid estimation was corrupted and gave wrong positions. Especially when selecting relatively large clusters, this could lead to significantly worse results.

Full Changelog: v0.2.3...v0.2.4

v0.2.3

What's Changed

• Add magicgui to requirements by @thorstenwagner in #16
• Use complementary colors when highlight picks in the umap by @thorstenwagner in #17
• Add multiple anchor points by @thorstenwagner in #15

Full Changelog: v0.2.2...v0.2.3

v0.2.2

What's Changed

• Fix issue that circle is not drawn on umap when clicking in tomogram by @thorstenwagner in #12

Full Changelog: v0.2.1...v0.2.2

v0.2.1

What's Changed

• Show notification when umap or label mask is not defined. by @thorstenwagner in #9

Full Changelog: v0.2.0...v0.2.1

v0.2.0

What's Changed

• Targets are now calculated used the medoid of the cluster - by @thorstenwagner in #6
• Write coordinate of medoids as .coords file to allow easy inspection - by @thorstenwagner in #6
• Install dependencies from conda by @thorstenwagner in #7

Full Changelog: v0.1.5...v0.2.0