diff --git a/docs/source/model_result.rst b/docs/source/model_result.rst
index 481433c7..23270819 100644
--- a/docs/source/model_result.rst
+++ b/docs/source/model_result.rst
@@ -1,27 +1,27 @@
-Result
+AtomicResult
 ======
 
 A Python implementation of the `MolSSI QCSchema
-<https://github.com/MolSSI/QCSchema>`_ ``Result`` object.
+<https://github.com/MolSSI/QCSchema>`_ ``AtomicResult`` object.
 
 
-ResultInput
+AtomicInput
 -----------
 
-.. autoclass:: qcelemental.models.ResultInput
+.. autoclass:: qcelemental.models.AtomicInput
 
-Result
+AtomicResult
 ------
 
-.. autoclass:: qcelemental.models.Result
+.. autoclass:: qcelemental.models.AtomicResult
 
 
 API
 ---
 
-.. autoclass:: qcelemental.models.results.ResultProtocols
+.. autoclass:: qcelemental.models.results.AtomicResultProtocols
 
-.. autoclass:: qcelemental.models.results.ResultProperties
+.. autoclass:: qcelemental.models.results.AtomicResultProperties
 
 .. autoclass:: qcelemental.models.results.WavefunctionProperties
 
diff --git a/qcelemental/datum.py b/qcelemental/datum.py
index 49b861ce..2ec7abb6 100644
--- a/qcelemental/datum.py
+++ b/qcelemental/datum.py
@@ -6,7 +6,6 @@
 from typing import Any, Dict, Optional
 
 import numpy as np
-
 from pydantic import BaseModel, validator
 
 
diff --git a/qcelemental/models/__init__.py b/qcelemental/models/__init__.py
index 24cc71c7..f2c6102c 100644
--- a/qcelemental/models/__init__.py
+++ b/qcelemental/models/__init__.py
@@ -12,5 +12,5 @@
 from .basis import BasisSet
 from .common_models import ComputeError, DriverEnum, FailedOperation, Provenance
 from .molecule import Molecule
-from .procedures import Optimization, OptimizationInput
-from .results import Result, ResultInput, ResultProperties
+from .procedures import Optimization, OptimizationInput, OptimizationResult
+from .results import AtomicInput, AtomicResult, AtomicResultProperties, Result, ResultInput, ResultProperties
diff --git a/qcelemental/models/align.py b/qcelemental/models/align.py
index c71def40..00db470a 100644
--- a/qcelemental/models/align.py
+++ b/qcelemental/models/align.py
@@ -1,5 +1,4 @@
 import numpy as np
-
 from pydantic import validator
 
 from ..util import blockwise_contract, blockwise_expand
diff --git a/qcelemental/models/basemodels.py b/qcelemental/models/basemodels.py
index 7bc03ea3..6484c038 100644
--- a/qcelemental/models/basemodels.py
+++ b/qcelemental/models/basemodels.py
@@ -3,8 +3,8 @@
 from typing import Any, Dict, Optional, Set, Union
 
 import numpy as np
-
 from pydantic import BaseModel, BaseSettings
+
 from qcelemental.testing import compare_recursive
 from qcelemental.util import deserialize, serialize
 from qcelemental.util.autodocs import AutoPydanticDocGenerator
diff --git a/qcelemental/models/common_models.py b/qcelemental/models/common_models.py
index 0a7afaaa..cd09c006 100644
--- a/qcelemental/models/common_models.py
+++ b/qcelemental/models/common_models.py
@@ -2,7 +2,6 @@
 from typing import Any, Dict, Optional
 
 import numpy as np
-
 from pydantic import Field
 
 from .basemodels import ProtoModel
diff --git a/qcelemental/models/molecule.py b/qcelemental/models/molecule.py
index a77466d9..859ea8c6 100644
--- a/qcelemental/models/molecule.py
+++ b/qcelemental/models/molecule.py
@@ -10,7 +10,6 @@
 from typing import Any, Dict, List, Optional, Tuple, Union
 
 import numpy as np
-
 from pydantic import Field, constr, validator
 
 from ..molparse import from_arrays, from_schema, from_string, to_schema, to_string
diff --git a/qcelemental/models/procedures.py b/qcelemental/models/procedures.py
index 67b342c4..eac0dbd3 100644
--- a/qcelemental/models/procedures.py
+++ b/qcelemental/models/procedures.py
@@ -124,6 +124,7 @@ def _trajectory_protocol(cls, v, values):
 
         return v
 
+
 def Optimization(*args, **kwargs):
     from warnings import warn
 
diff --git a/qcelemental/models/results.py b/qcelemental/models/results.py
index 095ff684..13ce9252 100644
--- a/qcelemental/models/results.py
+++ b/qcelemental/models/results.py
@@ -12,7 +12,7 @@
 from .types import Array
 
 
-class ResultProperties(ProtoModel):
+class AtomicResultProperties(ProtoModel):
     """
     Named properties of quantum chemistry computations following the MolSSI QCSchema.
     """
@@ -258,7 +258,7 @@ class WavefunctionProtocolEnum(str, Enum):
     none = "none"
 
 
-class ResultProtocols(ProtoModel):
+class AtomicResultProtocols(ProtoModel):
     """
     Protocols regarding the manipulation of a Result output data.
     """
@@ -286,7 +286,9 @@ class AtomicInput(ProtoModel):
     driver: DriverEnum = Field(..., description=str(DriverEnum.__doc__))
     model: Model = Field(..., description=str(Model.__base_doc__))
     keywords: Dict[str, Any] = Field({}, description="The program specific keywords to be used.")
-    protocols: ResultProtocols = Field(ResultProtocols(), description=str(ResultProtocols.__base_doc__))
+    protocols: AtomicResultProtocols = Field(
+        AtomicResultProtocols(), description=str(AtomicResultProtocols.__base_doc__)
+    )
 
     extras: Dict[str, Any] = Field({}, description="Extra fields that are not part of the schema.")
 
@@ -303,7 +305,7 @@ def __repr_args__(self) -> "ReprArgs":
 class AtomicResult(AtomicInput):
     schema_name: constr(strip_whitespace=True, regex=qcschema_output_default) = qcschema_output_default  # type: ignore
 
-    properties: ResultProperties = Field(..., description=str(ResultProperties.__base_doc__))
+    properties: AtomicResultProperties = Field(..., description=str(AtomicResultProperties.__base_doc__))
     wavefunction: Optional[WavefunctionProperties] = Field(None, description=str(WavefunctionProperties.__base_doc__))
 
     return_result: Union[float, Array[float], Dict[str, Any]] = Field(
@@ -425,6 +427,22 @@ def _stdout_protocol(cls, value, values):
             raise ValueError(f"Protocol `stdout:{outp}` is not understood")
 
 
+def ResultProtocols(*args, **kwargs):
+    from warnings import warn
+
+    warn("ResultProtocols has been renamed to AtomicResultProtocols and will be removed in v0.13.0", DeprecationWarning)
+    return AtomicResultProtocols(*args, **kwargs)
+
+
+def ResultProperties(*args, **kwargs):
+    from warnings import warn
+
+    warn(
+        "ResultProperties has been renamed to AtomicResultProperties and will be removed in v0.13.0", DeprecationWarning
+    )
+    return AtomicResultProperties(*args, **kwargs)
+
+
 def ResultInput(*args, **kwargs):
     from warnings import warn
 
diff --git a/qcelemental/molutil/test_molutil.py b/qcelemental/molutil/test_molutil.py
index 4a559225..7b3871de 100644
--- a/qcelemental/molutil/test_molutil.py
+++ b/qcelemental/molutil/test_molutil.py
@@ -2,9 +2,9 @@
 import pprint
 
 import numpy as np
+import pydantic
 import pytest
 
-import pydantic
 import qcelemental as qcel
 from qcelemental.testing import compare, compare_molrecs, compare_recursive, compare_values
 
diff --git a/qcelemental/testing.py b/qcelemental/testing.py
index 9fbf1d71..0280f6b3 100644
--- a/qcelemental/testing.py
+++ b/qcelemental/testing.py
@@ -5,7 +5,6 @@
 from typing import Callable, Dict, List, Union
 
 import numpy as np
-
 from pydantic import BaseModel
 
 pp = pprint.PrettyPrinter(width=120)
diff --git a/qcelemental/tests/test_datum.py b/qcelemental/tests/test_datum.py
index c0a42ff0..defb72a3 100644
--- a/qcelemental/tests/test_datum.py
+++ b/qcelemental/tests/test_datum.py
@@ -1,9 +1,9 @@
 from decimal import Decimal
 
 import numpy as np
+import pydantic
 import pytest
 
-import pydantic
 import qcelemental as qcel
 from qcelemental.testing import compare_recursive, compare_values
 
diff --git a/qcelemental/tests/test_model_general.py b/qcelemental/tests/test_model_general.py
index 3d40c7e1..e860e5cf 100644
--- a/qcelemental/tests/test_model_general.py
+++ b/qcelemental/tests/test_model_general.py
@@ -1,6 +1,9 @@
 import pytest
 
 from qcelemental.models import (
+    AtomicInput,
+    AtomicResult,
+    AtomicResultProperties,
     ComputeError,
     FailedOperation,
     Molecule,
@@ -8,15 +11,12 @@
     OptimizationInput,
     ProtoModel,
     Provenance,
-    Result,
-    ResultInput,
-    ResultProperties,
 )
 
 
 def test_result_properties_default_skip():
 
-    obj = ResultProperties(scf_one_electron_energy="-5.0")
+    obj = AtomicResultProperties(scf_one_electron_energy="-5.0")
 
     assert pytest.approx(obj.scf_one_electron_energy) == -5.0
 
@@ -24,7 +24,7 @@ def test_result_properties_default_skip():
 
 
 def test_result_properties_default_repr():
-    obj = ResultProperties(scf_one_electron_energy="-5.0")
+    obj = AtomicResultProperties(scf_one_electron_energy="-5.0")
     assert "none" not in str(obj).lower()
     assert "scf_one_electron_energy" in str(obj)
     assert len(str(obj)) < 100
@@ -56,7 +56,7 @@ def test_repr_failed_op():
 
 def test_repr_result():
 
-    result = ResultInput(
+    result = AtomicInput(
         **{"driver": "gradient", "model": {"method": "UFF"}, "molecule": {"symbols": ["He"], "geometry": [0, 0, 0]}}
     )
     assert "molecule_hash" in str(result)
diff --git a/qcelemental/tests/test_model_results.py b/qcelemental/tests/test_model_results.py
index e53ca536..55926d9c 100644
--- a/qcelemental/tests/test_model_results.py
+++ b/qcelemental/tests/test_model_results.py
@@ -214,25 +214,25 @@ def test_basis_map_raises():
 
 
 def test_result_build(result_data_fixture):
-    ret = qcel.models.Result(**result_data_fixture)
+    ret = qcel.models.AtomicResult(**result_data_fixture)
     assert ret.wavefunction is None
 
 
 def test_result_build_wavefunction_delete(wavefunction_data_fixture):
     del wavefunction_data_fixture["protocols"]
-    ret = qcel.models.Result(**wavefunction_data_fixture)
+    ret = qcel.models.AtomicResult(**wavefunction_data_fixture)
     assert ret.wavefunction is None
 
 
 def test_wavefunction_build(wavefunction_data_fixture):
-    assert qcel.models.Result(**wavefunction_data_fixture)
+    assert qcel.models.AtomicResult(**wavefunction_data_fixture)
 
 
 def test_wavefunction_matrix_size_error(wavefunction_data_fixture):
 
     wavefunction_data_fixture["wavefunction"]["scf_orbitals_a"] = np.random.rand(2, 2)
     with pytest.raises(ValueError) as e:
-        qcel.models.Result(**wavefunction_data_fixture)
+        qcel.models.AtomicResult(**wavefunction_data_fixture)
 
     assert "castable to shape" in str(e.value)
 
@@ -241,7 +241,7 @@ def test_wavefunction_return_result_pointer(wavefunction_data_fixture):
 
     del wavefunction_data_fixture["wavefunction"]["scf_orbitals_a"]
     with pytest.raises(ValueError) as e:
-        qcel.models.Result(**wavefunction_data_fixture)
+        qcel.models.AtomicResult(**wavefunction_data_fixture)
 
     assert "does not exist" in str(e.value)
 
@@ -288,7 +288,7 @@ def test_wavefunction_protocols(protocol, restricted, provided, expected, wavefu
         else:
             wfn_data[scf_name] = np.random.rand(bas.nbf, bas.nbf)
 
-    wfn = qcel.models.Result(**wavefunction_data_fixture)
+    wfn = qcel.models.AtomicResult(**wavefunction_data_fixture)
 
     if len(expected) == 0:
         assert wfn.wavefunction is None
@@ -305,7 +305,7 @@ def test_optimization_trajectory_protocol(keep, indices, optimization_data_fixtu
 
     if keep is not None:
         optimization_data_fixture["protocols"] = {"trajectory": keep}
-    opt = qcel.models.Optimization(**optimization_data_fixture)
+    opt = qcel.models.OptimizationResult(**optimization_data_fixture)
 
     assert len(opt.trajectory) == len(indices)
     for result, index in zip(opt.trajectory, indices):
@@ -314,12 +314,12 @@ def test_optimization_trajectory_protocol(keep, indices, optimization_data_fixtu
 
 def test_result_build_stdout_delete(result_data_fixture):
     result_data_fixture["protocols"] = {"stdout": False}
-    ret = qcel.models.Result(**result_data_fixture)
+    ret = qcel.models.AtomicResult(**result_data_fixture)
     assert ret.stdout is None
 
 
 def test_result_build_stdout(result_data_fixture):
-    ret = qcel.models.Result(**result_data_fixture)
+    ret = qcel.models.AtomicResult(**result_data_fixture)
     assert ret.stdout == "I ran."
 
 
@@ -342,3 +342,18 @@ def test_failed_operation(result_data_fixture):
     failed_json = failed.json()
     assert isinstance(failed_json, str)
     assert "its all good" in failed_json
+
+
+def test_result_model_deprecations(result_data_fixture, optimization_data_fixture):
+
+    with pytest.warns(DeprecationWarning):
+        qcel.models.ResultProperties(scf_one_electron_energy="-5.0")
+
+    with pytest.warns(DeprecationWarning):
+        qcel.models.ResultInput(**{k: result_data_fixture[k] for k in ["molecule", "model", "driver"]})
+
+    with pytest.warns(DeprecationWarning):
+        qcel.models.Result(**result_data_fixture)
+
+    with pytest.warns(DeprecationWarning):
+        qcel.models.Optimization(**optimization_data_fixture)
diff --git a/qcelemental/tests/test_utils.py b/qcelemental/tests/test_utils.py
index 27bd7ed3..876c664b 100644
--- a/qcelemental/tests/test_utils.py
+++ b/qcelemental/tests/test_utils.py
@@ -2,9 +2,9 @@
 
 import numpy as np
 import pytest
+from pydantic import BaseModel, Field
 
 import qcelemental as qcel
-from pydantic import BaseModel, Field
 from qcelemental.testing import compare_recursive, compare_values
 
 from .addons import serialize_extensions
diff --git a/qcelemental/util/serialization.py b/qcelemental/util/serialization.py
index fec28dfd..d01918b9 100644
--- a/qcelemental/util/serialization.py
+++ b/qcelemental/util/serialization.py
@@ -2,7 +2,6 @@
 from typing import Any, Union
 
 import numpy as np
-
 from pydantic.json import pydantic_encoder
 
 from .importing import which_import
diff --git a/setup.cfg b/setup.cfg
index cbaea1e5..eb4b20be 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -11,7 +11,6 @@ omit =
 line_length=120
 skip_glob =
     */data/nist*
-skip=__init__.py
 include_trailing_comma=True
 force_grid_wrap=0
 use_parentheses=True