diff --git a/pages/certificate.qmd b/pages/certificate.qmd new file mode 100644 index 00000000..bb4c35ab --- /dev/null +++ b/pages/certificate.qmd @@ -0,0 +1,56 @@ +--- +title: Course Certificate +subtitle: Tools for Reproducible Research +format: + pdf: + theme: flatly + mainfont: Arial + fontsize: 11pt + number-sections: false + fig-align: center + papersize: a4 +params: + location: '' + participant: '' + month_start: '' + day_start: '' + month_end: '' + day_end: '' + year: '' +engine: knitr +--- + +![NBIS logo](images/nbislogo_green_txt_f34bc9d3c3.png){height=50} +\hspace{4em} +![SciLifeLab logo](images/SciLifeLab_Logotype_Green_POS.png){height=50} +\hspace{4em} +![Elixir logo](images/elixir_sweden_white_background.png){height=50} + +This is to certify that **`r params$participant`** has successfully taken part in the NBIS/ELIXIR course + +**Tools for Reproducible Research** + +The course was held `r params$location`, `r params$month_start` `r params$day_start` - `r params$month_end` `r params$day_end` `r params$year`. It consisted of lectures, computer exercises and group discussions. + +The following subjects and fields were covered: + +- Use good practices for data analysis and management +- Clearly organise their bioinformatic projects +- Use the version control system Git to track and collaborate on code +- Use the package and environment manager Conda +- Use and develop workflows with Snakemake and Nextflow +- Use Quarto and Jupyter Notebooks to document and generate automated reports +- Use Docker and Singularity/Apptainer to distribute containerized computational environments + +**Examination**: Presence during all the lectures and computer/practical exercises. + + +The course was arranged by the National Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory (SciLifeLab) and ELIXIR-Europe. + +\-\-\-\ +*Stockholm, `r params$month_end` `r params$day_end`, `r params$year`* + +*Erik Fasterius & John Sundh*\ +*Dept of Biochemistry and Biophysics*\ +*NBIS, Science for Life Laboratory, Stockholm University*\ +*Course examiners* \ No newline at end of file diff --git a/pages/images/SciLifeLab_Logotype_Green_POS.png b/pages/images/SciLifeLab_Logotype_Green_POS.png new file mode 100644 index 00000000..2ad71786 Binary files /dev/null and b/pages/images/SciLifeLab_Logotype_Green_POS.png differ diff --git a/pages/images/elixir_sweden_white_background.png b/pages/images/elixir_sweden_white_background.png new file mode 100644 index 00000000..5e0da661 Binary files /dev/null and b/pages/images/elixir_sweden_white_background.png differ diff --git a/pages/images/nbislogo_green_txt_f34bc9d3c3.png b/pages/images/nbislogo_green_txt_f34bc9d3c3.png new file mode 100644 index 00000000..c1f16901 Binary files /dev/null and b/pages/images/nbislogo_green_txt_f34bc9d3c3.png differ