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22 Open 9 Closed
22 Open 9 Closed
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Issues list

Off-by-one error in robocord.job
#80 opened Sep 17, 2020 by gaurav
Figure out how to integrate OmniCORD into Omnicorp
#69 opened May 18, 2020 by gaurav
Rename RoboCORD to OmniCORD
#68 opened May 18, 2020 by gaurav
Replace Scala parallel collections with streams
#65 opened Apr 21, 2020 by gaurav
1
Identify articles with multiple versions and only use the most recent version
#62 opened Apr 6, 2020 by gaurav
@gaurav
2
Add support for optionally including broad and related synonyms
#59 opened Apr 6, 2020 by gaurav
Look into replacing SciGraph as our NER
#58 opened Mar 29, 2020 by gaurav
1
Export RoboCORD annotations as TextAE so we can upload it to PubAnnotation
#57 opened Mar 24, 2020 by gaurav
1
Improve gene name matching
#55 opened Mar 23, 2020 by gaurav
Add RDF export to RoboCORD
#52 opened Mar 23, 2020 by gaurav
Write out ranges of entities in the RoboCORD output
#51 opened Mar 20, 2020 by gaurav
Add prefixes to Turtle output
#48 opened Mar 18, 2020 by gaurav
@gaurav
Switch from HGNC to NCBIgene for gene IDs
#47 opened Mar 4, 2020 by gaurav
Replace Turtle comparison with Jena's isomorphic graph comparison
#39 opened Feb 5, 2020 by gaurav
Add tools for validating and verifying output files
#36 opened Jan 23, 2020 by gaurav
annotation false positive
#16 opened Oct 25, 2019 by balhoff
1
Match Uberon adjectival forms
#11 opened May 3, 2019 by balhoff
Add Meddra
#9 opened Apr 5, 2019 by balhoff
Store calculated information content scores for ontology terms
#5 opened Mar 9, 2019 by balhoff
1
Load ontologies into triplestore
#3 opened Feb 13, 2019 by balhoff
automate build
#2 opened Feb 12, 2019 by balhoff
2
Evaluate Noble Coder
#1 opened Feb 6, 2019 by balhoff
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