diff --git a/bindingdb/smartapi.yaml b/bindingdb/smartapi.yaml index 73d37e9b..01444f55 100644 --- a/bindingdb/smartapi.yaml +++ b/bindingdb/smartapi.yaml @@ -606,7 +606,7 @@ components: "$ref": "#/components/x-bte-response-mapping/pubchem-object" testExamples: - qInput: "UniProtKB:Q08722" ## Leukocyte surface antigen CD47 - oneOutput: "INCHIKEY:CLTVCCLZSPKLRB-NRGGWPRRSA-N" ## CHEMBL4474790 / H-D-Lys-N(Me)Arg-Phe-Tyr-Val-Val-Nle-Trp-Lys-D-Lys-OH + oneOutput: "INCHIKEY:CLTVCCLZSPKLRB-NRGGWPRRSA-N" ## PUBCHEM.COMPOUND:155537282 / CHEMBL4474790 ligand-protein: - supportBatch: true useTemplating: true @@ -637,8 +637,8 @@ components: response_mapping: "$ref": "#/components/x-bte-response-mapping/uniprot-subject" testExamples: - - qInput: "INCHIKEY:NZLXOECMDRNZDN-GUYCJALGSA-N" ## US10736883, Example 387.0 - oneOutput: "UniProtKB:P35414" ## Apelin receptor / APLNR + - qInput: "INCHIKEY:NZLXOECMDRNZDN-GUYCJALGSA-N" ## PUBCHEM.COMPOUND:134553288 (US10736883, Example 387.0) + oneOutput: "UniProtKB:P35414" ## NCBIGene:187 (Apelin receptor / APLNR) x-bte-response-mapping: ## note on references: ## sometimes the doi + pmid will refer to the same publication (so..."duplicate" references) @@ -651,7 +651,7 @@ components: input_name: subject.name ## was called "Target Name Assigned by Curator or DataSource" ref_pmid: relation.pmid ## no prefix ref_doi: relation.article_doi - ref_url: relation.bindingdb_link + source_url: relation.bindingdb_link ## commenting out because data-processing / biolink-modeling issues # in_taxon: subject.organism ## was called "Target Source Organism According to Curator or DataSource" # bindingdb_curation_datasource: relation.curation_datasource ## Curation/DataSource @@ -662,7 +662,7 @@ components: input_name: object.name ref_pmid: relation.pmid ## no prefix ref_doi: relation.article_doi - ref_url: relation.bindingdb_link + source_url: relation.bindingdb_link ## commenting out because data-processing / biolink-modeling issues # in_taxon: subject.organism # bindingdb_curation_datasource: relation.curation_datasource diff --git a/mygene.info/openapi_full.yml b/mygene.info/openapi_full.yml index ef0687af..2150b116 100644 --- a/mygene.info/openapi_full.yml +++ b/mygene.info/openapi_full.yml @@ -1295,7 +1295,7 @@ components: # go_qualifier: go.CC.qualifier ## seems to be like a relation clingen: MONDO: clingen.clinical_validity.mondo ## HAS PREFIX (MONDO) - ref_url: clingen.clinical_validity.online_report + source_url: clingen.clinical_validity.online_report ## commenting out because data-processing / biolink-modeling issues # ## possible values for classification: definitive, moderate, limited, disputed, refuted (!!!), no known disease relationship (!!!) # clingen_clinical_validity_classification: clingen.clinical_validity.classification