change modules to production paths #145
Comments
This was referenced Oct 5, 2020
|
Work completed in GFSv16 release. Closing issue now. |
jkhender
added a commit
to jkhender/global-workflow
that referenced
this issue
Oct 21, 2020
Squashed commit of the following:
commit 636ded675b81b15e8b3af2a211edf44f17972cf0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 19:23:16 2020 +0000
Issue #1 - add wtime_fcst_gfs time of 4hrs for C384
commit 4007f116adcde8372e590489d0faa0181babbc15
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 18:29:15 2020 +0000
Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS
commit ebdb058fd138a7aa408d69c967747686ea5b77d9
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 13:23:05 2020 -0500
Issue #1 - resource updates from low res testing
- set io_layout to "1,1" for low res gfs in config.fcst
- set npe_wav[_gfs] to 140 for all resolutions, same wave grid
- increase nth_fv3 to 4 for C192 and C384
- set smaller walltime for gfsfcst when resolutions less than C768
commit 3f0ab6ff2dd4ca42a45e68972b1936d398b32097
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 17:55:18 2020 +0000
Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory
commit d5b69c49ddbd03982db79f09707a49d01ef0b443
Merge: 4ebdd230 794e6655
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 16:56:27 2020 +0000
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into port2orion
* origin/release/gfsv16.0.0:
Issue #1 - pull in corrected npe_eobs values in config.resources
Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support
commit 4ebdd230c121a3c839829aa4ef855d80eb462549
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Tue Oct 20 16:53:46 2020 +0000
Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch
commit 794e6655cb227973e47b2373d0e4c97bf297479e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 20 16:45:58 2020 +0000
Issue #1 - pull in corrected npe_eobs values in config.resources
commit 1d0cad425b1e163377bba8ace6622bbbb2d81de0
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:24:55 2020 +0000
Issue #1 - add parm mon folder to ignore list and move parm section of ignore list up
commit d632c87a8f2ce85d54fa45da14aa09f91a0ec680
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:20:31 2020 +0000
Issue #1 - add FDATE to config.base
commit 22d4118f4bc7853fa81f6505fd9aaf5bc6dab4f8
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:12:29 2020 +0000
Issue #1 - save GFSv16 hand-off resource settings into new static nco configs
commit 6fd73d7fdf40b291ff49193b606538b540e46139
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Mon Oct 19 19:11:37 2020 +0000
Issue #1 - new FV3 tag that builds on Hera/Orion and update for building/running high res system on Hera
commit 484550c13d8ef957478f20afd6e722f7f610bb8f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 16 15:40:35 2020 +0000
Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support
commit 58dcf6d961f7478fec64a850e7bcd19ffd8f3741
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 15 15:08:38 2020 -0500
Update .gitignore for script renaming and removed external files
commit e3f8df65082853baa5a22ed3b242efdae66d40ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 15 11:59:58 2020 -0500
Add wave env updates into ORION.env, increase waveinit tasks, and update resources for analysis and efcs walltimes
commit e5e7cf1ea61d99080ec95b446c1bee45a57321a3
Merge: a1a7ac94 4b2d26db
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 13 14:25:56 2020 -0500
Sync merge with release/gfsv16.0.0 branch
commit 4b2d26db3b9b66ecfdd4756bfcddb6e16f255b03
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 13 17:41:24 2020 +0000
Issue #1 - adjust WAFS dependencies to wait for f036 post output
commit 9ef1999270e05c1ff5bae5ea5f737d9474c98b3d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 19:27:09 2020 +0000
Issue #1 - adding release notes for GFSv16
commit bf21010067bf7587be93229a979da347278fd7eb
Merge: d5e8be98 31563a59
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 18:15:36 2020 +0000
Merge remote-tracking branch 'origin/feature/gfsv16b' into release/gfsv16.0.0
commit d5e8be989d1f2f45095fea17fcb5ed1385759e89
Merge: 7728ce18 561e1953
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 9 18:13:53 2020 +0000
GFSv16 package changes from feature/gfsv16b before final wave updates
commit 31563a5982b26d7441e2673d68d1d1dac4fe231d
Merge: bf27d0b4 6edf0f7b
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 19:03:10 2020 -0400
Merge pull request #158 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit 6edf0f7b396587c4e014ba08fb6199461a970c41
Merge: 896ba312 bf27d0b4
Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov>
Date: Thu Oct 8 22:54:12 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Generating awips files with masks and elimination wmo headers for Arctic Ocean
commit 896ba31270185a1edaa3c6d32ec3c4295badf136
Author: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov>
Date: Thu Oct 8 22:50:48 2020 +0000
Issue #94 producing awips files with masks and deleting wmo headers for arctic ocean
commit bf27d0b4de54e6b873e20d784012c93384ad2358
Merge: 561e1953 959dac21
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 18:23:17 2020 -0400
Merge pull request #157 from JessicaMeixner-NOAA/feature/gfsv16b-wavegrids
Adding wave grids to grib interpolation
commit 959dac21e98ff96130f8e8c90a4b94b18c76f4f3
Merge: 50f33dd9 561e1953
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 21:57:29 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wavegrids
commit 50f33dd92e1f78f8879cb037652b1b4393511842
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 21:44:23 2020 +0000
updates to add glo_30m to the created grib files for waves
for awips processing
commit 561e19532e68aaff69f5b2568c3ebb2a536b7149
Merge: 7421143a 853a4619
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 16:10:32 2020 -0400
Merge pull request #156 from lgannoaa/feature/gfsv16b
Modify gfs/gdas post job to 20 minutes in wall clock.
commit 853a46199f2c59ff84422024b55a70e2679213ee
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 19:55:56 2020 +0000
Modify gfs/gdas post job to 20 minutes in wall clock.
commit 7421143a169264c8480aea5970a6d67f9bc56c43
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 18:40:28 2020 +0000
Issue #1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR
commit 8ac89aee11e7099303600ba6df8e3d4bf4d70a66
Merge: db9fa173 eb4ad338
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 14:37:11 2020 -0400
Merge pull request #155 from lgannoaa/feature/gfsv16b
Further ecflow updates
commit eb4ad338dfa1f51c9ec4ada58601ffd3f6894d7f
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 17:58:29 2020 +0000
Modify two wafs jobs trigger as:
jgfs_atmos_wafs_grib2 trigger ../../post/jgfs_atmos_post_f000 == complete
jgfs_atmos_wafs_grib2_0p25 trigger ../../post/jgfs_atmos_post_f036 == complete
commit 589b1df4d5637f6e4521e79d4f286a463da477f3
Merge: 445a16b0 db9fa173
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 17:46:36 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit db9fa173028efd7ed796024a2f4753629e91922b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 16:01:50 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies
commit 2a0c9739631ae4b1305a2653a1783cce287aeb96
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 15:12:10 2020 +0000
Issue #1 - update config.fv3 and config.resources with v16rt2 values
commit b5fbac7affc200e2c9a420f81615d0ae80b1dacf
Merge: 5dac3374 6402996f
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 10:36:43 2020 -0400
Merge pull request #154 from CoryMartin-NOAA/bugfix/eobs_resources
Change config.resources for eobs for low resolution cases
commit 5dac33742edd372a4e9b08c0b3029bb928cc569b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 14:35:23 2020 +0000
Issue #1 - update gfs_util modulefiles
commit 6402996f0cb5f787d04ac08efc8dd92dca767618
Author: CoryMartin-NOAA <cory.r.martin@noaa.gov>
Date: Thu Oct 8 14:28:02 2020 +0000
Change config.resources for eobs for low resolution cases
commit aae0912df6b1398cdad563495475916970590b1a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 13:51:06 2020 +0000
Issue #1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray
commit 244e91ca0caf433f82e6e709413db4bac40aade2
Merge: 3bdda7fb 3b051e93
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 8 09:40:24 2020 -0400
Merge pull request #153 from JessicaMeixner-NOAA/bugfix/wavedependency
update wave post pnt dependency
commit 5962e117f93f1fc9f040f97b9446bcf9dc1138e1
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 11:24:41 2020 +0000
updates to parm to reduce the number of wave variables
changes to the config so that wave models are interpolated
to the multi_1 masked files for the regional output grids
commit 445a16b030384a84c60318600a5ccdeeccbd063b
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Oct 8 04:03:32 2020 +0000
Modify module for each job to match implementation package change
Modify two wafs jobs trigger
Modify wall clock and resource for running jobs in NCO
Modify obsproc package location
commit 3b051e93adf60717f446564a08e5f3a11fd742af
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Oct 8 01:10:14 2020 +0000
add a dependency for the wavepostpnt on wavepostbndpnt for just gfs
as this job does not exist for gdas
commit 3bdda7fb50676d25dbc03fffa739889a141b913c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 17:36:27 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.9
commit 3a700dbda1d6f6ef965cf2fbf30cfdf6cb2a8fe2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 14:36:02 2020 +0000
Issue #1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section
commit 8cc7d57be3c1d08529dd37633a83a6ffa8ca94b3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 14:30:19 2020 +0000
Issue #1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static
commit 343ea3daece25bfeb1f8e870d361a364d1c228f0
Merge: 22f2a407 b57cd17d
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Oct 7 09:47:18 2020 -0400
Merge pull request #152 from JessicaMeixner-NOAA/feature/addwavedependency
for rocoto add a dependency to wavepostpnt job on wavepostbndpnt
commit b57cd17dafee5415b4955fcd8bbc76eb27e88740
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Oct 7 13:19:50 2020 +0000
for rocoto add a dependency to wavepostpnt job on wavepostbndpnt
so that both jobs will not run at the same time which will
slow both jobs down. This is the reason for the dependency, otherwise
there is not a "true" dependency between the jobs
commit 22f2a407e853b7d5342ee52faa53affdb25ac44e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 20:38:42 2020 +0000
Issue #1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3
commit c530316d07ae129f26907b2cae2079b55b37d0c2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 19:32:52 2020 +0000
Issue #1 - remove hardcoded POE and BACK values from config.prep
commit aece8baef1cd2f46991cb1235c315e228f7b661e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 19:02:37 2020 +0000
Issue #1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block
commit c75766cd176802242f003ad3612aadff02563fb2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 18:17:35 2020 +0000
Issue #1 - update config.fv3 based on real-time parallel
commit f79ec7e0ce356213681e8c87655bb3fb66df16f1
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 17:40:16 2020 +0000
Issue #1 - update prep job resources
commit 577b060e63b1f47c77fd8e7a2d1b7f111fe6fcd4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 16:08:07 2020 +0000
Issue #1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3
commit c28d8cea538cdcdfc8557cb71120436edd86e313
Merge: 6197bc62 1b79fd35
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 11:16:32 2020 -0400
Merge pull request #150 from NOAA-EMC/feature/gfsv16b_updates
nwtest module library and tag updates
commit 1b79fd35e79fe7d0bc8eb460dfc08d44261fc470
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 14:34:26 2020 +0000
Issue #1 - config updates from real-time parallel
commit 11ca41294784278dc425e1ca1320253239a85d40
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Oct 6 13:44:29 2020 +0000
Issue #1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs
commit 97e9d7f2d75bb7167b56aaa70c53f53e4a189192
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 18:50:40 2020 +0000
Issue #1 - update GSI tag to gfsda.v16.0.0
commit f6689d462ba4528c99a2a331ae8890759ba25ecb
Merge: 01e36208 8048cd02
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:05:27 2020 -0400
Merge pull request #149 from GuangPingLou-NOAA/feature/gfsv16b
Add 6 bufr stations to the bufr sounding output
commit 01e362089fbf71a962fcdfc7db48f243b74e2e50
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 17:09:04 2020 +0000
Issue #1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts
commit 6197bc623013d7fca82c556f3fb51c15832578b3
Merge: 451669a8 cd86b0ed
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 10:47:08 2020 -0400
Merge pull request #148 from NOAA-EMC/feature/gfsv16b_updates
Updates to optimize wave post jobs
commit cd86b0eddd305483007e1381d0d4a7256fa05680
Merge: 9b32bf0c 95bc516a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:16:50 2020 +0000
Merge branch 'feature/gfsv16b_updates' of https://github.com/NOAA-EMC/global-workflow into feature/gfsv16b_updates
commit 9b32bf0c83ac9eb38f8d3b1b405b704b26c6592a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Oct 5 14:16:21 2020 +0000
Issue #1 - adjust error handling in wave rocoto job scripts
commit 8048cd0285c8b9c8606673b04d60e8a137fe89b8
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:45:21 2020 +0000
issue #142 generate station i,j grid
commit e4e4b84235344b6da44ae732020115581abb9afe
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:45:00 2020 +0000
issue #142 generate station i,j grid
commit 68e5fd7279bf1f9c30fa4daa16bf44795f5e91f6
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:44:46 2020 +0000
issue #142 generate station i,j grid
commit fcf1f415333d53fe3a97546d4a16de55d6e1d703
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:43:49 2020 +0000
issue #142 add 6 bufr station data
commit 026b4e0a2ec1da85a3cc8c73053dd85fd4d56439
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:42:58 2020 +0000
issue #142 add 6 bufr stations for Thailand TMD
commit faaf8041faeecbc4c39cb37782bbe291ebd7a011
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:41:09 2020 +0000
issue #145 change dev path to prod for parallel netcdf modules
commit e6ba71f58ab5e88957f12fc742fded77a58f75d2
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Sat Oct 3 00:40:34 2020 +0000
issue #145 change dev path to prod for parallel netcdf modules
commit 95bc516af61e4aa35997f45ea625773f947c2125
Merge: 28904cdd a4d0e4d7
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 15:34:48 2020 -0400
Merge pull request #143 from JessicaMeixner-NOAA/feature/gfsv16b-wave-byhr
optimize wave post and EE2
commit 451669a8f8d7778addd7bbd090d2fe71c9a6e3f8
Merge: 340f849f 28904cdd
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 15:32:41 2020 -0400
Merge pull request #144 from NOAA-EMC/feature/gfsv16b_updates
Issue #1 - updates for modules and small fixes
commit 28904cddca4d3e432f6b155ae018b6a081aea82e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 19:05:10 2020 +0000
Issue #1 - updates for modules and small fixes
- fix to run ens_tracker without tclogg module in modulefiles/module_base.wcoss_dell_p3
- fix to sorc/syndat_qctropcy.fd/qctropcy.f for compile warning
- fix to gfswaveawipsbulls dependency in setup scripts
- update to bufr/11.3.0 from bufr/11.2.0 in modulefiles
- add override ability for POE for prep jobs in env/WCOSS_DELL_P3.env
commit a4d0e4d7a063c14f711bee5ef32cd0b183121ea7
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:59:22 2020 +0000
reverting changes to configs that were not intented to be committed
commit 2e6ba320b39b50030c8097a09700e2eb81cb724a
Merge: cb7b27c9 340f849f
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:08:59 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
commit cb7b27c96c59388e39283b2c01aff2da92fcedbf
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:08:16 2020 +0000
fix resource time estimates
commit d51a260adc0fb003730ae4090c528856ac18be93
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 18:04:50 2020 +0000
bug fix in exgfs_wave_post_pnt.sh
commit 340f849f1cad6b562a941f15318eaf2d050743f1
Merge: 897286fb d5457ec1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Oct 2 12:00:00 2020 -0400
Merge pull request #141 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Updates to downstream wave jobs
commit 2b2635d441beb988e6c09a329eb80e1d519266ee
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:38:06 2020 +0000
update resources and trigger from 192->180
commit 56193a6bf9e8942edd54b7b7078143a3c91bc77f
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:10:05 2020 +0000
last of EE2 changes
commit ad5dcff885c3690f991936412453506deed543a6
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Oct 2 14:01:25 2020 +0000
updates for EE2 from waves
commit d5457ec1e15e670677eea3171e68df20e4d6ca53
Merge: 4c488d30 897286fb
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Thu Oct 1 19:02:34 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Issue #94 Adding error capture in the Jjobs
commit 4c488d30947cf556d6cbf05d570fa6c41ae59ffb
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Thu Oct 1 18:45:21 2020 +0000
Issue #94 fix for failing silently
commit 897286fbdfea6a8d5765f9d89ab7c586bcadb201
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Oct 1 18:14:37 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.8
commit e133c5d1d509781824140f5ec1d302502394dc89
Merge: a25a7dea 545742c4
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Oct 1 09:13:05 2020 -0400
Merge pull request #140 from lgannoaa/feature/gfsv16b
Update ecflow scripts for GFSv16
commit 8f79b61ab8b0c7ed17b707eaae7736a3aedd33ef
Merge: cc9e98a6 a25a7dea
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Sep 30 16:09:27 2020 +0000
Issue #94 solving conflicts
commit cc9e98a6d03fa422f5080626da02426c174e2b45
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Sep 30 15:23:29 2020 +0000
Issue #94 add native grids as default grids
commit 545742c42c635d24c360a8c9b0902483cab66359
Merge: 65ba88e5 a25a7dea
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Wed Sep 30 14:05:40 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit a25a7deac9053dbb2ce119e3754f32c2d3f225b9
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 29 22:46:35 2020 +0000
Issue #1: update name of ncdiag executable and source code directory to be conistent
commit 2eab17ce11be26c7d113e16e3a9159e0e6395cac
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 29 19:05:21 2020 +0000
cleaning up the rearranged scripts
commit 65ba88e5ad97a560e4b1c6dd7a3568185e5ccbd9
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 29 18:22:29 2020 +0000
Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result.
This merge included an update from high watermark testing (tested by gfs team using devonprod) results impact the following jobs:
jgfs_atmos_analysis.ecf
jgfs_forecast.ecf
jgdas_atmos_analysis.ecf
jgdas_enkf_update.ecf
jgdas_enkf_ecen.ecf
commit d86cfee7befd1d97c9ff6fd8cb58d2f9c9f9f1d8
Merge: abe24e27 69bdae3e
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 28 18:47:23 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
commit 121bafee1e227119ddcba233da5b59af242128e4
Merge: 0d7ba5fb 69bdae3e
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Mon Sep 28 18:42:03 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 95f03be594d2944f14f0f6baa600bae27691e891
Merge: 7278b067 69bdae3e
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Mon Sep 28 17:30:03 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 69bdae3e7cdb35db28d899b7384daab48e888eb4
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Mon Sep 28 16:58:47 2020 +0000
Issue #1: update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh)
commit abe24e279666ecccb27fb875322373b4920a66d3
Merge: d4ebc2e6 ef6d2c5c
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 25 21:56:05 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave-byhr
Conflicts:
parm/config/config.resources
commit 0d7ba5fb286ac280efda5510a23e2dbf625ba19a
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 21:34:42 2020 +0000
Code manager indicated all wafs jobs wall clock is 30 mins.
Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed
commit 998228f94e36f63a0586f431fbcd32fb646d0ee6
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 21:02:57 2020 +0000
The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document.
commit 0e700ef159835510b3e3d02d27448826cb8dd914
Merge: 9b8e2f3a ef6d2c5c
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 25 19:49:13 2020 +0000
Bring change from upstream_feature_gfsv16b
commit ef6d2c5ca3243c579615ee47bcef494bc42f335e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 25 16:17:05 2020 +0000
Update GLDAS tag to gldas_gfsv16_release.v1.10.0
commit a9f8cb2616259b5610b9d101b5f9e50ea3013a2e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 25 16:06:11 2020 +0000
Update gfswafs job to run with loop over fcsthrs
commit 8187a31eca915184a43c0649db0170271b4ee6a9
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Sep 25 14:06:43 2020 +0000
Issue #1: update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3)
commit 320f33033ac0f6f6919bd933c0a18d2a4088fcd6
Author: Roberto Padilla <Roberto.Padilla@noaa.gov>
Date: Thu Sep 24 23:29:10 2020 +0000
Issue #94 add /fakedbn to run DBN_alerts
commit 0d2c6280ac80d944ea7e9e2700430f42d24b3867
Merge: f9876550 83655eda
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 17:17:17 2020 -0400
Merge pull request #139 from NOAA-EMC/feature/gfsv16b_jobname
Update script names to match ecflow convention
commit 83655eda76114414f39c5e32a61b93186b42ac3c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 18:30:00 2020 +0000
Update config.awips for newly named JJOB scripts
commit 2f5fb01d02516a6fe72664c54cd97a5585f99a3f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 18:20:14 2020 +0000
Update WAFS jobs/rocoto scripts to use new JJOB names
commit 9b8e2f3a2b782c9dc602c620ce7efc2f7210d6dd
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 24 15:30:45 2020 +0000
Making J-Job naming change accourding to code manager.
Remove temp files
commit ff50171eea7b99c7e89b0b773824464da5fe949f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 24 14:24:23 2020 +0000
Update post.sh UPP JJOB script name to submit
commit 0eb85537f30b1c89ed160374e2e7f8470d7a20d0
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 23 18:42:52 2020 +0000
Modify each ecflow script with old j-job name for test.
Modify the following in each definition file.
- ecen family require new extern from previous cycle
- Job jgfs_atmos_npoess_pgrb2_0p5deg trigger changed to be (requested
from code manager):
1. jgfs_atmos_post_manager:release_post180
- Job jgdas_enkf_select_obs trigger changed to be:
1. previous cycle enkf post complete
2. current cycle jgdas_atmos_analysis_calc complete (new job)
Tested as of 9/21/2020 before production switch with following condition:
1. Known issue in wafs gcip. Job failed. Waiting for code manager to
fix.
2. obsproc testing still on going.
3. Code manager still updating j-job and ex-script names. Testing in
hold until package is ready and WCOSS availability.
commit 9fb09168c9aa2057a0c919f66bdf43b8e4e3a545
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 15:41:20 2020 +0000
Update config.base.nco.static with config.base.emc.dyn changes
commit a1a7ac9495446976b9e9ccae48a39bb4b868c19b
Merge: ee4bc2b7 70f5064e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 10:19:52 2020 -0500
Issue #5 - sync merge with feature/gfsv16b_jobname
commit 70f5064e8e345e073d9c0dc7da812d0a2a51d91d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 14:00:07 2020 +0000
Script name updates for sfc_prep and tracker
commit 4346c03a1aaf1cf1429a59b6a5682065c2c6e51b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 23 13:51:44 2020 +0000
Name change for tropcy scripts and update WAFS tag
commit 0ef9e49d9752643fa3ebdc8fc0ef9768968836d2
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 17:50:35 2020 +0000
Fixing spelling mistake in config.gldas
commit 9fdb9eef052586c36abf034cd335ec649bf9cf19
Merge: 869dfa35 f9876550
Author: lin.gan <lin.gan@noaa.gov>
Date: Tue Sep 22 17:13:20 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 4b1affe520e0610c14168ccba4ef3439a3b7a966
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 16:39:39 2020 +0000
Updated drivers and release notes
commit 2ed155ccee58d3cc72d7fdf6577806c7a14e58e9
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 15:55:01 2020 +0000
Updated scripts
commit 6d171bc82f2c63f146fe1cf760c350b2effc20e6
Author: Wen Meng <wen.meng@noaa.gov>
Date: Tue Sep 22 15:26:37 2020 +0000
Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16.
commit 4b4069b715c9ebcc5122b79a1508f70ad7c78b46
Author: Wen Meng <wen.meng@noaa.gov>
Date: Tue Sep 22 14:59:24 2020 +0000
1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16.
2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part.
commit c071ac0159cce98ea98ce5fa8dc5337b284ad136
Author: BoiVuong-NOAA <Boi.Vuong@noaa.gov>
Date: Tue Sep 22 14:48:45 2020 +0000
Updated jobs name
commit ea13d0c9146457aadd65d567fda794beeeef6c7d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 14:27:47 2020 +0000
Update EMC_verif-global tag to verif_global_v1.11.0
commit 92e69985706cf62cdd7b383fd45c4cd50f937053
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 22 14:15:24 2020 +0000
Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag.
commit 37ae040a0f21ec344228128e3e79910059c3b734
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 04:30:58 2020 +0000
In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh
modified: driver/gdas/test_gdas_gldas.sh jobs/rocoto/gldas.sh parm/config/config.gldas sorc/link_fv3gfs.sh
commit c58b93a61f77d65f042f8226445163029ebd9f8d
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 04:06:06 2020 +0000
renamed: jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND
renamed: scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh
modified: docs/archive/README_bufr
driver/product/run_postsnd.sh
driver/product/run_postsnd.sh.cray
driver/product/run_postsnd.sh.dell
driver/product/run_postsnd.sh.hera
driver/product/run_postsnd.sh.jet
parm/config/config.postsnd
commit bec1b83027e162e4c083464d2cdb3fbdbd5168e8
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 22 03:51:02 2020 +0000
renamed: scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh
and modified jobs/JGLOBAL_FORECAST parm/config/config.fcst
commit d4ebc2e6798d13af1ced8a51899e80e209a13c71
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 21 18:28:15 2020 +0000
updates for optimizing point jobs
commit 7278b0677be6168a9695fca6c2e08154d9af0f63
Merge: 928e3e4b f9876550
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Fri Sep 18 18:35:06 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit f98765509cc7fc0e7b8979abfc73dbc5db035825
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 16:58:57 2020 +0000
Issue #1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build
commit e9e8d63db112ab8f5e15de08a1714cfebd386a2a
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 15:18:48 2020 +0000
Issue #1 - update to UFS_UTILS ops-gfsv16.0.0 tag
commit 3df7625d74012552cf69fcfe7c0b5384b860c999
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 18 13:25:00 2020 +0000
Issue #1 - fix to link_fv3gfs.sh for new GLDAS tag
commit 928e3e4b53e969f8ecdd3544c3bf2668b57c66b3
Merge: dd081426 1fc7bde9
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Sep 17 20:00:17 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit dd08142664e5695e3f27890c0560f0b5e48841a8
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Thu Sep 17 19:57:20 2020 +0000
Issue #131 Unify dbn_alert path
commit 1fc7bde9b7f99da7d0430387ec4a547e73ea641b
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Sep 17 19:37:41 2020 +0000
Issue #1: update to UPP tag "upp_gfsv16_release.v1.0.15"
commit 9eae5a8af39c4a8c5d47c16725ccc62b5d3c60cf
Merge: ce1c7825 99c15099
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Thu Sep 17 13:46:58 2020 -0400
Merge pull request #135 from KateFriedman-NOAA/feature/gfsv16b-down
Small updates to downstream jobs and tag updates
commit 99c1509923399845ba794cb8fad981d12935dd03
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 17 13:13:14 2020 +0000
Fix for running prep on Hera
commit 869dfa350a013f66e5fdca66aa9b1f0192c1570c
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 16 21:25:10 2020 +0000
ecflow full day cycle included
commit 515eeb5c6b188e873b304619c40c9a6efcfd9046
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 16 19:53:26 2020 +0000
Update WAFS tag to gfs_wafs.v6.0.6
commit 89f138af89814c865331b9aefcb8450b5915d1f7
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 16 16:33:21 2020 +0000
Small updates:
- new UPP tag
- new GLDAS tag
- new WAFS tag
- new module for WAFS
- EE2 updates to awips scripts
- added WAFS to archival
- break downstream and WAFS archival into separate gfs_downstream tarball
- update gfsarch dependencies to wait for all wavepost jobs to complete
commit 9930e8770a2940c46e22b243c11d2ac14f95611a
Merge: b3433d59 ce1c7825
Author: lin.gan <lin.gan@noaa.gov>
Date: Wed Sep 16 13:25:36 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit b100c22b5bfcf455ff3ff15bd71f0ddc15f1d071
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Tue Sep 15 18:57:21 2020 +0000
Issue #131 reduce scripts output to logfile
commit 6866e6cd2ef1e76dd58de27ebb7d68b2bd3fa304
Author: Guang Ping Lou <guang.ping.lou@noaa.gov>
Date: Tue Sep 15 18:55:03 2020 +0000
Issue #131 added a path to DBNROOT
commit b3433d59d1d5b75f015b0e044a8b4e03d55407f7
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 15 17:59:32 2020 +0000
Adding wafs wave and downstream jobs
commit 4c7ccd466bc71b3e73194ffc48385225e01e7c0c
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 15 15:29:44 2020 +0000
updates for by hour post
commit ce1c78255f4bf8f40c2f116547062c7f1b3832c5
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 15 10:25:37 2020 +0000
Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix)
commit 67b33dd15633345e0fd59dd37728c26b36d4c0b3
Merge: c33869da 586fe6ce
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Mon Sep 14 10:34:39 2020 -0400
Merge pull request #130 from JessicaMeixner-NOAA/bugfix/rtofs
Bugfix for rtofs
commit 586fe6ce19c5fc281dec16be3347d0311f3e99ce
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Sep 14 14:29:01 2020 +0000
adding the line to go back a day for RTOFS for the if not NCO
section because RTOFS will not be available until 06 cycle
commit 15fcb8a46e2cbc93282d1ad038e6decc5fcdacfb
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Mon Sep 14 13:30:24 2020 +0000
Restructured ecflow - up to post step
commit c33869dab2704396ea6e569dcd202a2b9866827a
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Mon Sep 14 02:34:08 2020 +0000
deleted relocate_mv_nvortex.fd since storm relocation is no longer needed.
modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex
commit 4320bf9fd55757df79b63ed15c2041b1acd0e604
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Sat Sep 12 00:05:38 2020 +0000
Issue #1: correct DA typos in sorc/link_fv3gfs.sh
commit 674cd841a7be3a2a9c772cd455ab980195ea9fcc
Merge: 46c2404e ad1a9d90
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 15:06:36 2020 -0400
Merge pull request #124 from JessicaMeixner-NOAA/feature/gfsv16b-wave
Splitting post jobs for waves
commit ad1a9d9044e89b75ec82bb201e35005552d3d177
Merge: 986f8f0b fd687727
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Fri Sep 11 14:01:35 2020 -0400
Merge pull request #4 from KateFriedman-NOAA/feature/gfsv16b-splitwavepost
Sync with feature/gfsv16b and small updates to split wave post changes
commit fd687727b2df80f81fabc41b94f808b74e68783c
Merge: 986f8f0b fc60e895
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:52:30 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-splitwavepost
commit fc60e895dea1c123a4b8e02b50df0d0cfa43f77f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 17:45:03 2020 +0000
Increase walltime for new wavepost jobs
commit e0dd1097de2c335400a546137569886a838c46ba
Merge: 0844b004 46c2404e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 14:20:15 2020 +0000
Merge branch 'feature/gfsv16b' into feature/gfsv16b-wave
commit 46c2404eba485d08e381ef81ebd5ac10c5ad605f
Merge: c5546570 9d9b79c9
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Fri Sep 11 10:15:49 2020 -0400
Merge pull request #128 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit c554657023d82ac934b481593e55406c45157932
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Sep 11 13:59:51 2020 +0000
Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards
commit 9d9b79c911add71065b0999821772d026609ad62
Merge: cb78f7b8 d3946f90
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:48:19 2020 +0000
Issue #94 solving a conflict
commit cb78f7b839a7b5fd5082f39592e3b450ce059e82
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Fri Sep 11 13:21:41 2020 +0000
Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script
commit b4a99e3d8b2f6a3837084ddfb08da6a667de81e0
Merge: edb91373 e6148566
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Fri Sep 11 13:19:13 2020 +0000
Merge branch 'feature/gfsv16b' of https://github.com/lgannoaa/global-workflow into feature/gfsv16b
commit e614856610da39345976823d29bdc32781f38c71
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 10 16:26:11 2020 +0000
add gfs gempak downstream jobs into def file
commit 907291d81c512968817241b883a0084b8506f2b2
Merge: 3f9695b4 d3946f90
Author: lin.gan <lin.gan@noaa.gov>
Date: Thu Sep 10 15:46:45 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit ee4bc2b7268bf8f23ca7f7b3b631ddd6730c6a8c
Merge: 41d146fc d3946f90
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 9 08:54:17 2020 -0500
Issue #5 - sync merge with feature/gfsv16b
commit 6b38e648f244afbba9590ea1a4de70d4ce2ed119
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 8 22:14:13 2020 +0000
worked on wcoss
commit edb913733023b1025786901aee895d2dbca5edc7
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Tue Sep 8 16:09:07 2020 +0000
ecflow script rename after redesign approved - not including all wave jobs
commit d3946f9006f433e0a6b2f459aeaa7fd8bf800aff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 8 14:46:39 2020 +0000
Issue #1: clean up DA sections of link_fv3gfs.sh
commit 986f8f0b9858f61d32d337a67efa966a7948aa94
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 0844b0043c937925c5ad76b4fad03308483d49b3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit c1d5c45c13b46964d9d2479962b8c56307a6ad11
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Fri Sep 4 15:42:25 2020 +0000
fix from Bhavani for having first wave grib file be set
as a forecast instead of analysis
commit 3f9695b44deef4790ae443f4d0c1844b1385374d
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 19:07:35 2020 +0000
ecflow gfs v16 nco review 3
commit 256885283bb42c2309e820ca53b44042b8223617
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Sep 3 17:44:47 2020 +0000
updates to split boundary points plus saving config file updates
commit 8a203e5d5afa92a2b925f69efa5237a2c0d3dca6
Merge: 40c689b5 26c84b3c
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 17:36:19 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b
commit 64409b1e9e976b75afd8a3548e7023dce534c4ae
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:42:23 2020 +0000
Adding missing space to if-block in env files to resolve runtime failure
commit 0485442f5876b82de73c47429d3a70f58f0aa263
Merge: 26c84b3c 2006bbcb
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Sep 3 15:37:50 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b-wave' into feature/gfsv16b-wave
* upstream/feature/gfsv16b-wave:
adding pnt jobs as seperate jobs for env
moving definitions of wavempexec and wave_mpmd from jobs to env
lowering the resource requirement for wave prep job
update module for cdo
updates to resources for wave jobs
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
cleaning up wave point post scripts
rename wave post script
remove gridded so can rename
updates to boundary point
Remove extra space from line
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
fix typos
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
adding module use for cdo module on wcoss dell
updates for new weights file and adding cdo module for wave prep
Adding new wavepostbndpnt and wavepostpnt jobs
updating wave post scripts for restructured format
updates to JJOBs for wave post point for new structure
changing exit 0 to exit number for FATAL errors in ice prep for waves
updating error message and exit if there is no current input file
update WAVE_PREP so that currents do not check for previous 24 hour so that parallels will be reproducible also deleted unused variable
renaming wave job and scripts
update jobs for waves
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
updates for wave scripts to split them, also added updates from GEFS branch to add extra error checking
updates from gefs post workflow: updates for re-run case as well as extra error messages
commit 26c84b3ca81dec965ab31d00409b537f61174dc1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Sep 3 14:06:29 2020 +0000
Issue #1: remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py
commit 40c689b5d5886d9a4bed92e0c6262bfc5988836d
Author: Lin.Gan <lin.gan@noaa.gov>
Date: Thu Sep 3 02:00:09 2020 +0000
ecflow gfsv16 redesign 2
commit 609e157c2477b662b55bbf3d53999cdd30856bc8
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:35:28 2020 +0000
Issue #1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs
commit b0bebad6258bd81c0b0c89b559a04d9b059c838e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 20:08:01 2020 +0000
Issue #1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete
commit 084c89e3d562f8c9977eaa17624646be388f7854
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Sep 2 19:58:37 2020 +0000
Issue #1: set n_sponge=42 in gfs section of config.fcst
commit 2006bbcb1e54e3cd5ae0ff2826b6d0b211c1d013
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:22:38 2020 +0000
adding pnt jobs as seperate jobs for env
commit c61cd59488b64ead77e13b2eb5faeb383d052ea0
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 19:02:21 2020 +0000
moving definitions of wavempexec and wave_mpmd from jobs to env
commit 68ed2d670ebe25713554f2165a0bbc7c35fb5030
Merge: 4e7975d2 70abda26
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 17:45:26 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-wave
Conflicts:
parm/config/config.resources
ush/rocoto/setup_workflow.py
ush/rocoto/setup_workflow_fcstonly.py
commit 70abda260dc9ab47533d25cd570dd055c4644123
Merge: 0a31d568 52e987ac
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 10:28:22 2020 -0400
Merge pull request #122 from KateFriedman-NOAA/feature/gfsv16b_wavedown
Add downstream wave jobs to GFSv16
commit 0a31d568bdacd0fb2d8bc6e1fddb09d2c72d014c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 14:09:57 2020 +0000
Remove unneeded settings from config.post
commit 52e987ac67477932e5b034321cf52f1cc756081c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:05:42 2020 +0000
Added null DBNROOT to wave awips configs
commit b3c7b7379a6ebb53b4d4533b894b1bf36df3c2fd
Merge: 074f2782 add6ea0b
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Sep 2 13:02:41 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b_wavedown
commit 806a57838b2a6fd8a9df993fd6cd8debf9fb659a
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 12:28:43 2020 +0000
add extra script for by hour points for waves
commit ab3e0b196bbb147da99da4ef34710e8d5fbb68ea
Merge: 054f8c53 4e7975d2
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 11:40:04 2020 +0000
Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave
commit 054f8c53608689b00b32d035ce728ed3d8cb3ad9
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Wed Sep 2 11:39:28 2020 +0000
updates for boundary points by hour parallelization
commit 4e7975d265857e4e634e0c7352f6ed2de1a99336
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 22:45:05 2020 +0000
lowering the resource requirement for wave prep job
commit add6ea0bae2c56bba2e3d76460771095b98786b1
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Sep 1 19:40:10 2020 +0000
Issue #1: rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards
commit 8a7e8d9944b8727da91bfb28bbfe44958f0aeb65
Merge: 4c9978a8 595edcfa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 15:00:08 2020 -0400
Merge pull request #121 from KateFriedman-NOAA/feature/gfsv16b-wafs
Adding WAFS jobs to GFSv16
commit 4c9978a8b0a98527d7c78a3da0a0a55e39cefed0
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 18:48:44 2020 +0000
modified: checkout.sh to use gldas_gfsv16_release.v1.6.0
commit 595edcfaaf1372889c8d569e01ec4dfefb51c469
Merge: 8a593c8d 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 17:30:08 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit ada0fb3155a57bdba074c84e1ab3d73eabb0e2f4
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Sep 1 17:18:27 2020 +0000
update module for cdo
commit 074f2782438471740453e356b856a4756e59c858
Merge: a1a3d69b 8a593c8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:30:56 2020 +0000
Sync with WAFS branch
commit a1a3d69ba40564f550053b99b4328ba41c7cc45d
Merge: 249b6ef7 06bda7de
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:22:20 2020 +0000
Sync merge with feature/gfsv16b
commit 8a593c8df03d8a879c5488fbd671fef94f5d867d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:09:49 2020 +0000
Update to WAFS tag and added SENDDBN_NTC to both base configs
commit 5270ed831c0b3c428736cbd8a789a4d3cfdcc0fe
Merge: 95ec3329 eabda84f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Sep 1 14:03:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 06bda7dec74831951034b72c83abbb2d994ee539
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 14:02:44 2020 +0000
modified: link_fv3gfs.sh to not link or copy
0readme fix_chem fix_fv3 fix_sfc_climo
which are not used by GFS.v16 and are of large size
commit eabda84f97c11251f672d95bb604ad0c50e8da18
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 13:48:11 2020 +0000
modified: link_fv3gfs.sh to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh
commit 223492bf6c56c0491c0034dc1d4a0a3e6e97a607
Author: fanglin.yang <fanglin.yang@noaa.gov>
Date: Tue Sep 1 03:59:53 2020 +0000
modified: link_fv3gfs.sh to allow "fix" directories to be removed before rerunning
link_fv3gfs.sh for RUN_ENVIR=nco case
commit 95ec3329e72a54b0dabdccdecd467972c4914dcd
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 18:57:32 2020 +0000
Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh
commit 6f660d9a9a5758f3d74f87f170a95a26ca0c0e6a
Merge: 8da41916 3282a899
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:58:55 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16b-wafs
commit 3282a8996ab0510699932a53897b87730b2cc492
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 31 17:47:37 2020 +0000
Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts
commit 9cde3a41f34d0c2618e8fb06ff1276cec5378ef5
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 18:46:57 2020 +0000
Remove UFS_UTILS ecf extensions
commit f7a92dbc1c3ad822d3b8e567967e91384631288d
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Fri Aug 28 18:09:26 2020 +0000
Issue #1: (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel
commit 249b6ef761fb41b5d102b282fccedeb827192dff
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:52:54 2020 +0000
Remove ecf script name extensions from downstream wave scripts
commit 004a29f39204314159d2cbd028950cfaba07cf33
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:50:03 2020 +0000
Add new downstream wave jobs to workflow
commit 8da4191644ff55f46e8f394e4e1d29641d3c117c
Merge: 8f97726a 6319bda4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:42:11 2020 +0000
Sync merge with feature/gfsv16b
commit 8f97726a4170d56dcaf6732ae141fae9aaebfd8d
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 16:39:50 2020 +0000
Add new downstream WAFS jobs
commit 6319bda47548873acb8859d9a47d2ac6a6ef4c67
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 28 15:41:55 2020 +0000
Issue #1 - update GLDAS and UPP workflow files for removal of ecf script extension
commit 8f7615c76f76611d748246a80d9286de7c4d3295
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:53:25 2020 +0000
Issue #1: remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh
commit af754d1fa0aa4a521fcd5b4fc04eaa88d475dbff
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Thu Aug 27 20:47:14 2020 +0000
Issue #1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files
commit a6e91b48b7024c83491fd1f93c6d7df8e3301af5
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 27 20:25:45 2020 +0000
updates to resources for wave jobs
commit f0b9a98973b7983eadab51c7009723b5d0b4a564
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 23:04:02 2020 +0000
Issue #1: update name of DA enkf chgres script in config.echgres
commit 01f33c498bf0b5c0d48486cd04dab9c93c721906
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Wed Aug 26 20:58:29 2020 +0000
Issue #1: Rename DA enkf chgres job and script as per EE2 guidance
commit 7d3f37819aba17dc794d10f7453061802779b435
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 18:35:59 2020 +0000
Workflow changes for wave gempak and awips downstream jobs
commit 485632eafe37c1866011af1bd0a601fb1c7adc4c
Merge: 2946baad e191fd4b
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Wed Aug 26 11:49:40 2020 -0400
Merge pull request #3 from KateFriedman-NOAA/feature/gfsv16b-wave
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit e191fd4bb87af787feab486bf072fe4dce7f12f4
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 15:47:49 2020 +0000
Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py
commit 4641a72e1ced493c7ec5d837a3093908e388b5df
Merge: a1b08c92 25ae4899
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 26 11:33:23 2020 -0400
Merge pull request #119 from GeorgeGayno-NOAA/feature/gfsv16b
enkf_chgres_recenter_nc.fd - Remove hard-coded vertical levels.
commit 25ae4899cee3dc3aeff1e36f0ac1d0b0773ca2f9
Author: George Gayno <George.Gayno@noaa.gov>
Date: Wed Aug 26 14:25:36 2020 +0000
feature/gfsv16b: Add Cory's updates to build 'enkf_chgres_recenter_nc'
on Cray.
Issue #102.
commit 2946baad88d908b32793f542cab42f0c89adf009
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Wed Aug 26 13:44:06 2020 +0000
cleaning up wave point post scripts
commit 3590e9a45e2b13b22ff3c3d4827907ddcf55eebf
Merge: 727c3ffd a1b08c92
Author: George Gayno <George.Gayno@noaa.gov>
Date: Tue Aug 25 20:20:17 2020 +0000
feature/gfsv16b: Merge updates from authoratative feature/gfsv16b
branch.
Issue #112.
commit a1b08c92892278453f25c2530f8b8fb968af9a34
Merge: 45ad029b ce3816d3
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 16:01:57 2020 -0400
Merge pull request #116 from RobertoPadilla-NOAA/feature/gfsv16_wave_prdgen
Feature/gfsv16 wave prdgen
commit ce3816d3e88b8d2de7472a214e66cb54aceca9a6
Merge: b0c91610 45ad029b
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Tue Aug 25 19:55:53 2020 +0000
Merge remote-tracking branch 'upstream/feature/gfsv16b' into feature/gfsv16_wave_prdgen
Issue #94 Adding prdgen for waves
commit 90181842fbb7a22479f12d3a67bcdc8fa4b8f669
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:02:22 2020 +0000
rename wave post script
commit 1f15be0a8207d3117200bcc145a5ae66b7445ec3
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:01:41 2020 +0000
remove gridded so can rename
commit 1fc5b368fe0cd438e2202b62de7753b7efed7af6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Tue Aug 25 19:00:20 2020 +0000
updates to boundary point
commit f0e3ae5c2cd441673a4a670618e87f050a12c9e9
Merge: 98d6c163 b74b21e7
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Tue Aug 25 14:15:57 2020 -0400
Merge pull request #2 from KateFriedman-NOAA/feature/gfsv16b-wave
Feature/gfsv16b wave
commit b74b21e71edbb62207ccfcafe4c6ed5b6d301cfe
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:14:15 2020 +0000
Remove extra space from line
commit 25e2cc4596213b39d2a3dc3ee8afda4a86e10d38
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 18:12:04 2020 +0000
Fix wavepostbndpnt dependency and increase wavepostbntpnt and wavepostpnt walltimes
commit 45ad029bad4367961e5eff987f27226b0ac78d5a
Author: russ.treadon <Russ.Treadon@noaa.gov>
Date: Tue Aug 25 13:40:45 2020 +0000
Issue #1: several minor changes
* Externals.cfg and sorc/checkout.sh: update to tag verif_global_v1.10.1
* jobs/rocoto/arch.sh: update ARCDIR cp to use new path to tracker output
* scripts/run_gfsmos_master.sh.dell: remove module purge from mos driver script
commit 0a85a36ef0784bebf96d2f97c24dd4c642ac23f1
Merge: d5861551 5190efb1
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Tue Aug 25 09:20:42 2020 -0400
Merge pull request #118 from GuangPingLou-NOAA/feature/gfsv16b
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 5190efb119c6eec6a7c67d90327dee4666307541
Author: Guang.Ping.Lou <Guang.Ping.Lou@noaa.gov>
Date: Tue Aug 25 12:30:45 2020 +0000
Issue #117 Modufy Bufr station Hilo's grid point representation
commit 98d6c16336e5b0a3241174c54b7631667a4f919d
Merge: 0eacf5e2 32bd57ef
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:39 2020 +0000
Merge branch 'feature/gfsv16b-wave' of github.com:JessicaMeixner-NOAA/global-workflow into feature/gfsv16b-wave
commit 0eacf5e21c3149d2d922b4c2495e48fb2355e639
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 22:27:28 2020 +0000
fix typos
commit b0c9161061302ccf4b890cceabe5b4eaecb67e61
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 22:25:05 2020 +0000
Issue #94 changing native by interpolated grids for gempak
commit 8a68d3c6d6996f389609d5961f32f0db116797d1
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 21:47:44 2020 +0000
Issue #94 removing the load of modulefiles and sending set.pdy to j-jobs
commit 32bd57ef2b390dbe73a744188a40ca4c42c306fe
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 20:35:39 2020 +0000
updating WCOSS work around for CDO, CDO_ROOT is missing from module file
commit a2d06bb0bf82ee48899cb26ea9abf2331b543107
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:55:02 2020 +0000
adding module use for cdo module on wcoss dell
commit e5c9f037bd82ed4bc72cf11241d7c053160ff5b9
Author: jessica.meixner <Jessica.Meixner@noaa.gov>
Date: Mon Aug 24 18:29:36 2020 +0000
updates for new weights file and adding cdo module for wave prep
commit 96655fbe5b5daf130d4a9a458ce47059c047376a
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 16:56:37 2020 +0000
Issue #94 removing modulefiles load from j-jobs
commit 7f9344f777075ce3220d9a9fccba74c07e4f40e2
Author: wx21rph <Roberto.Padilla@m71a2.ncep.noaa.gov>
Date: Mon Aug 24 14:32:26 2020 +0000
Issue #94 Solving reviewers comments
commit c9598a3207bb06cbd7d2619d97f723f6511da9a4
Merge: bf97710b 92a2a43d
Author: Jessica Meixner <jessica.meixner@noaa.gov>
Date: Mon Aug 24 10:12:43 2020 -0400
Merge pull request #1 from KateFriedman-NOAA/feature/gfsv16b-wave
Adding new wavepostbndpnt and wavepostpnt jobs
commit 92a2a43db190982944b4166b929a791a1b0b0750
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 24 14:06:23 2020 +0000
Adding new wavepostbndpnt and wavepostpnt jobs
commit bf97710bece30195679740b0de2b32e0adc6c3c6
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 21 00:20:56 2020 +0000
updating wave post scripts for restructured format
commit a914521cec478667191b365e2a2a62e3553e0ff7
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 23:52:47 2020 +0000
updates to JJOBs for wave post point for new structure
commit 1f195f8d432072f4e4f66406ea6b09256a185d2b
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:20:28 2020 +0000
changing exit 0 to exit number for FATAL errors in ice prep for waves
commit f836a7869dbb88badd93fcd9d08314284eee4f96
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 15:17:28 2020 +0000
updating error message and exit if there is no current
input file
commit 529cc3692f4fc003295584e761279be3c9405b68
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:50:50 2020 +0000
update WAVE_PREP so that currents do not check for previous 24 hour
so that parallels will be reproducible
also deleted unused variable
commit 57c4258ba73778fe95118ebfae98c4bbf012ae37
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:09:22 2020 +0000
renaming wave job and scripts
commit 1626cb2f90bfea5663f198cfc2ac2916a9200e1a
Merge: da292216 d5861551
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 14:02:54 2020 +0000
Merge remote-tracking branch 'EMC/feature/gfsv16b' into feature/gfsv16b-splitwavepost
commit da2922163922f4b4b14dba78dba36e9eced3a2c5
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Thu Aug 20 13:50:15 2020 +0000
update jobs for waves
commit a1c456f267ddf701aa47ad33fd231a2f1ae0bf99
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 20:09:47 2020 +0000
Issue #94 renaming the J-jobs
commit 41d146fc0fda97a41ef829ecff41b005bbf21740
Merge: c2a4f04e d5861551
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 13:54:13 2020 -0500
Issue #5 - sync merge with feature/gfsv16b after COMPONENT update
commit 036617c8a9b5da765b82c276f7b087aa4e16d679
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 14:24:01 2020 +0000
Issue #94 Updating the modulefiles for waves-prdgen
commit d5861551ae5b1fe2c2b00802159a42f7fde06357
Merge: 9b923ac3 0e0699aa
Author: Kate Friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 09:49:08 2020 -0400
Merge pull request #109 from NOAA-EMC/feature/gfsv16b-restructure
GFSv16 restructure for new $COMPONENT subfolder
commit 1e76093c8554c3ccb87a7ed243f738f5763ca5da
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Wed Aug 19 13:47:44 2020 +0000
Issue #94 adding waves-prdgen to gfsv16
commit 0e0699aac7cb00988c999546dcdf3a52b11706e3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 19 13:47:29 2020 +0000
Issue #94 - fix to messed up shebang in setup_expt_fcstonly.py
commit c7a708fd54ffe60c6259f35c4230e6e73ecd6f77
Author: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov>
Date: Tue Aug 18 21:16:19 2020 +0000
Issue #94 adding waves-prdgen for gfsv16
commit 0b2744e53a35c570178b7e6cd7ede72b6255c579
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit 4888001e76d24277b3a75d1d520945383f49d456
Author: Jessica.Meixner <Jessica.Meixner@noaa.gov>
Date: Fri Aug 14 18:55:40 2020 +0000
updates for wave scripts to split them, also added updates from
GEFS branch to add extra error checking
commit 00dc1973010b68e65e176c90a1eeaef359b7beae
Author: Kate.Friedman <Kate.Friedman@noaa.gov>
Date: Fri Aug 14 17:36:31 2020 +0000
Issue #94 - pull in two fixes for wave job setup in free-forecast mode
commit c2a4f04e50ccb45febf55f7985c64a287973dee0
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 14 08:21:01 2020 -0500
Issue #5 - update for COMINsyn on Orion
commit fe849e918b30e6a9ca22ebe1a81e350afc4ed6cf
Merge: 0c06cda7 9b923ac3
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:49:52 2020 +0000
Issue #94 - Sync merge branch 'feature/gfsv16b' into feature/gfsv16b-restructure
commit 9b923ac308841d7accfc6ed2a4ef9733dce2305e
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 13 18:37:51 2020 +0000
Issue #1 - update to prod_util version (1.1.3 -> 1.1.4) on WCOSS-Dell for post P1/P2 removal
commit bf0bff444bdd8a02e1c875eadbdc6b60628cff76
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 12 10:00:51 2020 -0500
Issue #5 - update to JGFS_CYCLONE_TRACKER for machine=ORION
commit 0c06cda7dd667e936e8aa71fc1c584a4839094ba
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 18:50:44 2020 +0000
Issue #94 - update CFP module version on WCOSS-Dell
commit b73d25224d8208291048b774a91497928b051713
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 17:58:55 2020 +0000
Issue #94 - update WCOSS-Dell module versions to prod_util and EnvVars
commit 485ee56c1e772e8efa944ee9a3f350130d49a718
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 10 13:00:42 2020 +0000
Issue #94 - fix AWIPS file dependency
commit 5a7e45e398efafb4b5b6cde0a69f799a99406d34
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 7 09:48:45 2020 -0500
Issue #5 - add missing AND condition for wavepostsbs
commit bdaa28fbdc2372ed85320a4b044a33d350e2e7be
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Fri Aug 7 13:34:22 2020 +0000
Issue #94 - updates for FSU tracker
commit e8800078f8d00e9447ed81b83eb49135110deb8f
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Thu Aug 6 14:31:05 2020 -0500
Issue #5 - change UFS_UTILS checkout back to auth repo release/ops-gfsv16 branch after commit to it
commit df20d848de2420eacba296ebdf9c9fe68d697351
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 5 15:46:27 2020 -0500
Issue #5 - fix for errant text in setup_workflow_fcstonly.py for waveinit job settings
commit 4cee6f65467c34e171ed3e0bdc72458a875e5e21
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Wed Aug 5 17:14:04 2020 +0000
Issue #94 - adding -o flag to checkout.sh for optional GTG checkout with EMC_post
commit 563d2931378c3d6276212cc9c4e2a4e9a286589c
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 4 18:19:47 2020 +0000
Issue #94 - small fix to updated UFS_UTILS part of link_fv3gfs.sh
commit 7c4f8eab074115323a7812dc498e8ea043916718
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Tue Aug 4 08:53:39 2020 -0500
Issue #5 - add new APRUNCFP setting to ORION.env
commit 5652485ef0cc42f8814df9d08e8b953b025d08b4
Merge: 5cf8a458 d1751309
Author: kate.friedman <kate.friedman@noaa.gov>
Date: Mon Aug 3 13:10:27 2020 -0500
Issue #5 - Sync merge branch '…
JianKuang-Intelsat
added a commit
that referenced
this issue
Dec 18, 2020
* add gfs gempak downstream jobs into def file * Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script * Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards * Increase walltime for new wavepost jobs * Issue #1: correct DA typos in sorc/link_fv3gfs.sh * deleted relocate_mv_nvortex.fd since storm relocation is no longer needed. modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex * Restructured ecflow - up to post step * adding the line to go back a day for RTOFS for the if not NCO section because RTOFS will not be available until 06 cycle * Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix) * updates for by hour post * Adding wafs wave and downstream jobs * Issue #131 added a path to DBNROOT * Issue #131 reduce scripts output to logfile * Small updates: - new UPP tag - new GLDAS tag - new WAFS tag - new module for WAFS - EE2 updates to awips scripts - added WAFS to archival - break downstream and WAFS archival into separate gfs_downstream tarball - update gfsarch dependencies to wait for all wavepost jobs to complete * Update WAFS tag to gfs_wafs.v6.0.6 * ecflow full day cycle included * Fix for running prep on Hera * Issue #1: update to UPP tag "upp_gfsv16_release.v1.0.15" * Issue #131 Unify dbn_alert path * Issue #1 - fix to link_fv3gfs.sh for new GLDAS tag * Issue #1 - update to UFS_UTILS ops-gfsv16.0.0 tag * Issue #1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build * updates for optimizing point jobs * renamed: scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh and modified jobs/JGLOBAL_FORECAST parm/config/config.fcst * renamed: jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND renamed: scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh modified: docs/archive/README_bufr driver/product/run_postsnd.sh driver/product/run_postsnd.sh.cray driver/product/run_postsnd.sh.dell driver/product/run_postsnd.sh.hera driver/product/run_postsnd.sh.jet parm/config/config.postsnd * In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh modified: driver/gdas/test_gdas_gldas.sh jobs/rocoto/gldas.sh parm/config/config.gldas sorc/link_fv3gfs.sh * Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag. * Update EMC_verif-global tag to verif_global_v1.11.0 * Updated jobs name * 1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16. 2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part. * Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16. * Updated scripts * Updated drivers and release notes * Fixing spelling mistake in config.gldas * Name change for tropcy scripts and update WAFS tag * Script name updates for sfc_prep and tracker * Update config.base.nco.static with config.base.emc.dyn changes * Modify each ecflow script with old j-job name for test. Modify the following in each definition file. - ecen family require new extern from previous cycle - Job jgfs_atmos_npoess_pgrb2_0p5deg trigger changed to be (requested from code manager): 1. jgfs_atmos_post_manager:release_post180 - Job jgdas_enkf_select_obs trigger changed to be: 1. previous cycle enkf post complete 2. current cycle jgdas_atmos_analysis_calc complete (new job) Tested as of 9/21/2020 before production switch with following condition: 1. Known issue in wafs gcip. Job failed. Waiting for code manager to fix. 2. obsproc testing still on going. 3. Code manager still updating j-job and ex-script names. Testing in hold until package is ready and WCOSS availability. * As requested from management, point ufs-weather-model to development: b8c5c22 git submodule f61416fef691d9ba39a40df1ce72aa574f54c390 FMS (2019.01.03) 6bc61df FV3 (heads/develop) 9d05172b711f4ab5d6f978dbe575bd67a681b55a NEMS (heads/develop) 96e3f3a8fa0389a4b110b0fa23e7a414f6d92038 WW3 (6.07.1-50-g96e3f3a8) ffdd19bc6c1df747394b7e9958a76238fcd44242 stochastic_physics (ufs-v1.0.0-70-gffdd19b) Remove aerosol from checkout * Update post.sh UPP JJOB script name to submit * Making J-Job naming change accourding to code manager. Remove temp files * modifications to python scripts remove aeroic task from setup_workflow_fcstonly.py delete setup_workflow_fcstonly_noaeroic.py add setup_workflow_fcstonly_aeroic.py * Update WAFS jobs/rocoto scripts to use new JJOB names * Update config.awips for newly named JJOB scripts * Issue #94 add /fakedbn to run DBN_alerts * Issue #1: update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3) * Update gfswafs job to run with loop over fcsthrs * Update GLDAS tag to gldas_gfsv16_release.v1.10.0 * The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document. * Code manager indicated all wafs jobs wall clock is 30 mins. Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed * Issue #1: update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh) * Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result. This merge included an update from high watermark testing (tested by gfs team using devonprod) results impact the following jobs: jgfs_atmos_analysis.ecf jgfs_forecast.ecf jgdas_atmos_analysis.ecf jgdas_enkf_update.ecf jgdas_enkf_ecen.ecf * cleaning up the rearranged scripts * Issue #1: update name of ncdiag executable and source code directory to be conistent * Issue #94 add native grids as default grids * - updated to use 28Sep develop ufs-weather-model, d021e7b f61416fef691d9ba39a40df1ce72aa574f54c390 FMS (2019.01.03) 9e1ba7c FV3 (heads/develop) 9d05172b711f4ab5d6f978dbe575bd67a681b55a NEMS (heads/develop) 96e3f3a8fa0389a4b110b0fa23e7a414f6d92038 WW3 (6.07.1-50-g96e3f3a8) ffdd19bc6c1df747394b7e9958a76238fcd44242 stochastic_physics (ufs-v1.0.0-70-gffdd19b) - changed compilation options in build_fv3.sh - removed fv3gfs.fd_jkh directory since changes are already in develop branch - updated getic script to retrieve files after 00Z 26Feb20 from mass store with prefix name of 'com' * Issue #1 - update WAFS tag to gfs_wafs.v6.0.8 * Issue #94 fix for failing silently * updates for EE2 from waves * last of EE2 changes * update resources and trigger from 192->180 * bug fix in exgfs_wave_post_pnt.sh * fix resource time estimates * reverting changes to configs that were not intented to be committed * Issue #1 - updates for modules and small fixes - fix to run ens_tracker without tclogg module in modulefiles/module_base.wcoss_dell_p3 - fix to sorc/syndat_qctropcy.fd/qctropcy.f for compile warning - fix to gfswaveawipsbulls dependency in setup scripts - update to bufr/11.3.0 from bufr/11.2.0 in modulefiles - add override ability for POE for prep jobs in env/WCOSS_DELL_P3.env * issue #145 change dev path to prod for parallel netcdf modules * issue #145 change dev path to prod for parallel netcdf modules * issue #142 add 6 bufr stations for Thailand TMD * issue #142 add 6 bufr station data * issue #142 generate station i,j grid * issue #142 generate station i,j grid * issue #142 generate station i,j grid * Issue #1 - adjust error handling in wave rocoto job scripts * Issue #1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts * Issue #1 - update GSI tag to gfsda.v16.0.0 * Issue #1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs * Issue #1 - config updates from real-time parallel * Issue #1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3 * Issue #1 - update prep job resources * Issue #1 - update config.fv3 based on real-time parallel * Issue #1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block * Issue #1 - remove hardcoded POE and BACK values from config.prep * Issue #1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3 * for rocoto add a dependency to wavepostpnt job on wavepostbndpnt so that both jobs will not run at the same time which will slow both jobs down. This is the reason for the dependency, otherwise there is not a "true" dependency between the jobs * Issue #1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static * Issue #1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section * Issue #1 - update WAFS tag to gfs_wafs.v6.0.9 * Temporarily peg GSI checkout to hash of release branch * add a dependency for the wavepostpnt on wavepostbndpnt for just gfs as this job does not exist for gdas * Modify module for each job to match implementation package change Modify two wafs jobs trigger Modify wall clock and resource for running jobs in NCO Modify obsproc package location * updates to parm to reduce the number of wave variables changes to the config so that wave models are interpolated to the multi_1 masked files for the regional output grids * Issue #1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray * Change config.resources for eobs for low resolution cases * Issue #1 - update gfs_util modulefiles * Issue #1 - update config.fv3 and config.resources with v16rt2 values * Issue #1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies * Modify two wafs jobs trigger as: jgfs_atmos_wafs_grib2 trigger ../../post/jgfs_atmos_post_f000 == complete jgfs_atmos_wafs_grib2_0p25 trigger ../../post/jgfs_atmos_post_f036 == complete * Issue #1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR * Modify gfs/gdas post job to 20 minutes in wall clock. * updates to add glo_30m to the created grib files for waves for awips processing * Issue #94 producing awips files with masks and deleting wmo headers for arctic ocean * Issue #1 - adding release notes for GFSv16 * Issue #1 - adjust WAFS dependencies to wait for f036 post output * Add wave env updates into ORION.env, increase waveinit tasks, and update resources for analysis and efcs walltimes * Update .gitignore for script renaming and removed external files * Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support * Issue #1 - new FV3 tag that builds on Hera/Orion and update for building/running high res system on Hera * Issue #1 - save GFSv16 hand-off resource settings into new static nco configs * Issue #1 - add FDATE to config.base * Issue #1 - add parm mon folder to ignore list and move parm section of ignore list up * Issue #1 - pull in corrected npe_eobs values in config.resources * Add UPP netcdf module library load to HERA.env to resolve runtime netcdf version mismatch * Issue #1 - increase C768 npe_eobs to 200 for Hera nodes with less memory * Issue #1 - resource updates from low res testing - set io_layout to "1,1" for low res gfs in config.fcst - set npe_wav[_gfs] to 140 for all resolutions, same wave grid - increase nth_fv3 to 4 for C192 and C384 - set smaller walltime for gfsfcst when resolutions less than C768 * Issue #1 - fix firstcyc queue bug in workflow_utils.py on WCOSS * Issue #1 - add wtime_fcst_gfs time of 4hrs for C384 * Fix wrong DATE in new if-block in config.anal for cold start checking * Issue #1 - increase wavepostbndpnt and wavepostpnt walltimes to give more time on Hera * Cycled warm start run using develop ufs-weather-model branch and feature/ccpp using merged branch on the 10/13 (4da0f) with feature/gfsv16b (31563). CPP_SUITE="FV3_GFS_v16beta" build_fv3 option: CCPP=Y 32BIT=Y SUITES=FV3_GFS_v15,FV3_GSD_v0,FV3_GSD_noah,FV3_GFS_v16beta wave is turned off for this test because it's for atmospheric physics and comparison. * Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC * Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md * Issue #1 - adjust epos groups for DOIAU/DOIAU_ENKF=NO * Issue #1 - update anal, eobs, and eupd resources for low res * Issue #1 - update WAFS tag to gfs_wafs.v6.0.13 * Revert epos change in setup_workflow.py * modified: jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to remove redundant variables in the two scripts and make them work for both EMC and NCO parallels. * Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0 * Reduce C384 nth_fv3 to 1 in config.fv3 * Add FDATE calculation to setup scripts and change FDATE in to parsed value in config.base.emc.dyn * Set nth_fcst to 4 for C384 on Hera to handle less memory * Increase gfsfcst walltime for C192 * Tie DOIAU_ENKF to DOIAU and add DOIAU check for IAU_OFFSET and IAU_FHROT in config.base * Set nth_fcst to 4 for C384 deterministic * Hera updates for OUTPUT_FILETYPES and resources * Change wavepostbndpnt to wait for fcst to end * As of 11/12/2020, this package is tested with a C768 cycled (6 cycle) run on Dell system using FV3_GFS_v16beta (imp_physics=11). The wave components are turned off. Ready to merge back to the development. The expdir and log files are available on HPSS: /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-LOG.tar /NCEPDEV/emc-global/1year/Lin.Gan/WCOSS_DELL_P3/feature_ccpp/FV3_GFS_v16beta/FV3_GFS_v16beta-EXPT.tar File parm/config/config.resources has been modified to fix EUPD job issue in job card resource. File sorc/build_fv3.sh and sorc/link_fv3gfs.sh changed to clear up development remark. Removed a developer directory that is not required for FV3_GFS_v16beta confiruration. * Changes to be committed: modified: jobs/rocoto/fcst.sh deleted: modulefiles/module_base.wcoss_dell_p3_fcst deleted: parm/config/config.aeroic modified: parm/config/config.base.emc.dyn modified: parm/config/config.resources modified: sorc/build_fv3.sh modified: sorc/checkout.sh modified: sorc/link_fv3gfs.sh deleted: ush/load_fv3gfs_modules_fcst.sh deleted: ush/rocoto/setup_workflow_fcstonly_aeroic.py * deleted: jobs/rocoto/aeroic.sh * Remove GSD suite file and aero IC extract util * sync config.base.emc.dyn and config.resources with development * modified: parm/config/config.base.emc.dyn parm/config/config.base.nco.static scripts/exglobal_forecast.sh sorc/build_all.sh sorc/build_fv3.sh sorc/checkout.sh to add the option to check out ufs_weather_model and run with CCPP phsyics * Merge with v16ccpp modified: parm/config/config.base.emc.dyn modified: parm/config/config.resources modified: scripts/exglobal_forecast.sh modified: sorc/build_fv3.sh modified: sorc/checkout.sh * update eupd resource * Remove development configuration from config.nsst * modified: ../scripts/exglobal_forecast.sh modified: build_all.sh build_fv3.sh to automatically detect model version, CCPP vs IPD * Modified build_all.sh checkout.sh partial_build.sh to allow switch turn on/off ccpp option Turn on CCPP usage: checkout.sh -c build_all.sh -c Turn off CCPP usage: checkout.sh build_all.sh * Clean up development code from build_all * modified: build_fv3.sh * modified: exglobal_forecast.sh to add min_lakeice = ${min_lakeice:-"0.15"} min_seaice = ${min_seaice:-"0.15"} * bug fix exglobal_forecast.sh * modified: ../parm/config/config.fcst and exglobal_forecast.sh 1. use iovr for model after NCAR/ccpp-physics#514 and iovr_sw and iovr_lw for older version of the model, controled by RUN_CCPP 2. remove the if block and use atmos_model_nml to turn on/off the CCPP option * modified checkout.sh to check out a hash instead of head of the develop branch * modified: ../scripts/exglobal_forecast.sh * Modify exglobal_forecast.sh to create namelist in runable sequence. * As requested, using 2e25df5 for ufs-weather-model. * scripts/exglobal_forecast.sh Merge with v16ccpp * Modify build_all.sh while getopts "oc" option to while getopts "c" option * Fix missing COMROOT setting on Orion * Adjust efcs walltime and eupd thread value on Orion * gfsv16 physics; script updates * update IC scripts * model configure changes; preserve $DATA in postdet * update /driver; /parm and /ecflow folder to match gfsv16 * Revert "update /driver; /parm and /ecflow folder to match gfsv16" This reverts commit 45341b6. * configuration update * preserve /atmos level COM directory * typo fix * Coupled/devmerge (#203) * update to waves scripts for merging with develop - synced with develop where necessary and left changes in prep and gridded post for coupled-crow updates that should remain * removing ecflow scripts that are not in develop branch * removing files from branch that do not appear in develop branch and were not added for coupling in the coupled-crow branch * updating sorc and ush files to match dev when these are not files changes intentionally in coupled-crow branch and therefore should match develop branch * updating files to match develop that were not matching through merge but should match develop branch * cleaning up evn files after merge with develop * cleaning up differences in jobs/rocoto folder from develop branch as it does not seem that the changes here were made intentionally in feature/coupled-crow so this brings us insync with the develop branch * resolving differences between develop and this branch in terms of wave variables for jobs/JGLOBAL_FORECAST * updating module file to match develop * updates for wave model so that the forecast runs -- atm post still does not work * fix typo * Fixes for issue #202 (FINDDATE) and issue #208 (postsnd.sh permissions) * coupled: updates for merging checkout, build and link with develop branch (#206) * update to waves scripts for merging with develop - synced with develop where necessary and left changes in prep and gridded post for coupled-crow updates that should remain * removing ecflow scripts that are not in develop branch * removing files from branch that do not appear in develop branch and were not added for coupling in the coupled-crow branch * updating sorc and ush files to match dev when these are not files changes intentionally in coupled-crow branch and therefore should match develop branch * updating files to match develop that were not matching through merge but should match develop branch * cleaning up evn files after merge with develop * cleaning up differences in jobs/rocoto folder from develop branch as it does not seem that the changes here were made intentionally in feature/coupled-crow so this brings us insync with the develop branch * resolving differences between develop and this branch in terms of wave variables for jobs/JGLOBAL_FORECAST * updating module file to match develop * updates for wave model so that the forecast runs -- atm post still does not work * fix typo * updating .gitignore to match develop a little better * cleaning up differences between checkout and link with merging to develop * updates for build and checkout scripts to unify with develop and simplify build_all to add an option for coupling * fix typo in build all script * updating .gitignore for linked files missing from list * add fix files for ocean post * changing -p to -c option and adding coupled to the ccpp -c * configuration and minor script update for inline post * bug fix for vrfy job in layout file; missing namelist variable fix * updates that are needed after merging * Issue #201 - workaround for failing post000 job before hpc-stack solution * Issue #189 - update ufs-weather-model hash * Coupled/devmerge 3 (#219) * update for making post work without inline post * add in linking capabilities * updating module file so that atm pos will work (#214) Co-authored-by: JessicaMeixner-NOAA <Jessica.Meixner@noaa.gov> * set inline_post off for default file dependencies for post job triggering updated * add new parameters into /default * clean up excessive logic clause in namelist parsing scripts * match default value of some namelist variables * name list update for CCPP suite "FV3_GFS_v16beta_coupled" update CCPP suite selection in test case file create prototype 5.1 case file with updated CCPP suite Making each CCPP suite a selectable option is beneficial, because this could handle future development when they start to differ from each other. * change CCPP suite back to FV3_GFS_v15p2_coupled in case file * bugfix for iovr variables Co-authored-by: lin.gan <lin.gan@noaa.gov> Co-authored-by: kate.friedman <kate.friedman@noaa.gov> Co-authored-by: wx21rph <Roberto.Padilla@m71a1.ncep.noaa.gov> Co-authored-by: russ.treadon <Russ.Treadon@noaa.gov> Co-authored-by: Jessica Meixner <jessica.meixner@noaa.gov> Co-authored-by: fanglin.yang <fanglin.yang@noaa.gov> Co-authored-by: Guang Ping Lou <guang.ping.lou@noaa.gov> Co-authored-by: BoiVuong-NOAA <Boi.Vuong@noaa.gov> Co-authored-by: Wen Meng <wen.meng@noaa.gov> Co-authored-by: Judy.K.Henderson <Judy.K.Henderson@noaa.gov> Co-authored-by: Roberto Padilla <Roberto.Padilla@noaa.gov> Co-authored-by: CoryMartin-NOAA <cory.r.martin@noaa.gov> Co-authored-by: wx21rph <Roberto.Padilla@m71a3.ncep.noaa.gov> Co-authored-by: lgannoaa <37596169+lgannoaa@users.noreply.github.com>
KateFriedman-NOAA
added a commit
that referenced
this issue
Mar 23, 2021
Merge remote-tracking branch 'origin/release/gfsv16.0.0' into release/gfsv16.0.0_to_ops * origin/release/gfsv16.0.0: (1073 commits) Reverting transfer parm file changes committed at 39bab45 Component tag updates for nwprod/gfsv16.0.7 Updated transfer parm files for gdas, enkf, and gfs dissemination Add config.resources.nco.static ecflow forecast job resource updates from NCO v16.0.7 install Add missing symlinks for WAFS source code folders Update EMC_gfs_wafs tag to gfs_wafs.v6.0.19 Remove KEEPDATA from config.base.nco.static Pull in config changes from NCO v16.0.7 install Pull in workflow changes from NCO v16.0.7 install Update EMC_verif-global tag to verif_global_v1.13.4 ecFlow resource adjustments from NCO for forecast and post jobs issue #257 shorten run time on Mars Dell1 file system Update Fit2Obs tag to newm.1.3 for bugfix Update EMC_verif-global tag for Hera bug Pull in nwpara/gfsv16.0.6 updates for parse-storm-type.pl Issue #1 and issue #238 - update Externals.cfg to match checkout.sh updates for v16.0.6 move errchk definition from script to job for wave prdgen and gempak adding definition of errchk which was undefined in these scripts Issue #1 and issue #233 - update GLDAS tag to gldas_gfsv16_release.v1.13.0 Issue #1 and issue #241 - update EMC_verif-global tag Issue #1 and issue #238 - remove ak_10m grid from config.wave and update checkout.sh tags for ufs-weather-model and EMC_gfs_wafs Issue #1 and issue #226 - update UPP tag to upp_gfsv16_release.v1.1.3 in Externals.cfg Issue #1 and issue #226 - update UPP tag to upp_gfsv16_release.v1.1.3 Issue #1 and issue #226 - update exgfs_atmos_grib2_special_npoess.sh for dbn_alert issue #227 reducing output bufr files to 64 levels per NCO request issue #227 reducing output bufr files to 64 levels per NCO request Issue #1: update ecflow to be consistent with NCO's gfs.v16.0.4 and update checkout to bring in new UPP tag (see issue #226) Upaded ush script scale_dec.sh Updated scripts gfs_v16.0 Issue #1 - add grib_util module load to several analysis ecflow scripts Issue #1 - update WAFS tag to gfs_wafs.v6.0.17 for dbn_alert change Issue #1 - correct gridded wave parm files for v16.0.3 Issue #1 - changes from NCO for GFSv16.0.3 Issue #1 - update Externals.cfg with final tags for GFSv16.0.2 Issue #1 - correct permissions on jobs/rocoto/postsnd.sh Issue #1 - update gempak version to 7.3.3 in the ecflow gfs.ver file Issue #1 - update gempak and dumpjb versions to 7.3.3 and 5.1.0 respectively Script alert updates from NCO for wave downstream Add override for COMIN_WAV_RTOFS in emc mode for waveprep job Issue #197: place CDATE specific sections of config.anal and config.prep inside RUN_ENVIR=emc blocks. These sections are use for retrospective parallels and therefore do not need to be executed in operations (NCO). modified: JGLOBAL_FORECAST modified: JGLOBAL_FORECAST to make it work for both emc and nco running environments. modified: JGLOBAL_FORECAST A test showed that jobid is not defined in JGLOBAL_FORECAST running in the Rocoto environment. jobid is defined in ./env files. Defining DATA without sourcing ./env/$nachine.env caused the script to fail. Move the definitin of DATA after sourcing env parameters modified: checkout.sh to use WAFS tag gfs_wafs.v6.0.16 modified: checkout.sh to update UPP to upp_gfsv16_release.v1.1.1, a minor syntax bug fix modified: link_fv3gfs.sh to 1) use hard copies of external fix fields and executable for NCO installation 2) use soft links for all other files and directories for both NCO and EMC installations Compared local files in NCO implementation directory with release/gfs.v16.0.0 branch, changes made by NCO(Jen Yang) in the following files are either accepted or rejected. create a new branch release/gfsv16.0.0.nco to merge changes made by NCO in /gpfs/dell1/nco/ops/nwpara/gfs-v16/gfs.v16.0.1 back to EMC's repository update for the wave parm so that the wave model will look for the correct restart for when gfs is not run every cycle updates for checking if RTOFS files exist and only processing RTOFS files for needed fhr Issue #1 - update WAFS tag to gfs_wafs.v6.0.14 and update dumpjb version to 5.1.0 modified: jobs/JGFS_ATMOS_POSTSND and jobs/rocoto/postsnd.sh to remove redundant variables in the two scripts and make them work for both EMC and NCO parallels. Issue #1 - update WAFS tag to gfs_wafs.v6.0.13 Rename Release_Notes.gfs.v16.0.0.txt to Release_Notes.gfs.v16.0.0.md Issue #1 - update WAFS tag to gfs_wafs.v6.0.12 for removal of in-cloud turbulence per AWC Issue #1 - pull in corrected npe_eobs values in config.resources Issue #1 - update FV3 tag to GFS.v16.0.14 for Hera/Orion build support Issue #1 - adjust WAFS dependencies to wait for f036 post output Issue #1 - adding release notes for GFSv16 Issue #94 producing awips files with masks and deleting wmo headers for arctic ocean updates to add glo_30m to the created grib files for waves for awips processing Modify gfs/gdas post job to 20 minutes in wall clock. Issue #1 - update link_fv3gfs.sh to point to newly frozen fix_nco_gfsv16 FIX_DIR Modify two wafs jobs trigger as: jgfs_atmos_wafs_grib2 trigger ../../post/jgfs_atmos_post_f000 == complete jgfs_atmos_wafs_grib2_0p25 trigger ../../post/jgfs_atmos_post_f036 == complete Issue #1 - update WAFS tag to gfs_wafs.v6.0.10 and change WAFS job dependencies Issue #1 - update config.fv3 and config.resources with v16rt2 values Issue #1 - update gfs_util modulefiles Change config.resources for eobs for low resolution cases Issue #1 - update to fbwndgfs modulefiles for WCOSS-Dell and WCOSS-Cray updates to parm to reduce the number of wave variables changes to the config so that wave models are interpolated to the multi_1 masked files for the regional output grids Modify module for each job to match implementation package change Modify two wafs jobs trigger Modify wall clock and resource for running jobs in NCO Modify obsproc package location add a dependency for the wavepostpnt on wavepostbndpnt for just gfs as this job does not exist for gdas Issue #1 - update WAFS tag to gfs_wafs.v6.0.9 Issue #1 - remove POE/BACK block from config.prep and set POE=YES/BACK=off as defaults in env/WCOSS_DELL_P3.env prep section Issue #1 - remove unneeded DMPDIR and ICSDIR from config.base.nco.static for rocoto add a dependency to wavepostpnt job on wavepostbndpnt so that both jobs will not run at the same time which will slow both jobs down. This is the reason for the dependency, otherwise there is not a "true" dependency between the jobs Issue #1 - return POE=YES and BACK=off setting for prep on WCOSS_DELL_P3 Issue #1 - remove hardcoded POE and BACK values from config.prep Issue #1 - move ABIBF, AHIBF, and HDOB pointers into RUN_ENVIR=emc block Issue #1 - update config.fv3 based on real-time parallel Issue #1 - update prep job resources Issue #1 - update g2tmpl module load in modulefiles/module_base.wcoss_dell_p3 Issue #1 - config updates from real-time parallel Issue #1 - remove unneeded line in vrfy.sh and update link_fv3gfs.sh for UFS_UTILS execs Issue #1 - update GSI tag to gfsda.v16.0.0 Issue #1 - update component tags and modulefiles for nwtest lib updates, remove unneeded module load and modulefile from downstream wave job rocoto scripts Issue #1 - adjust error handling in wave rocoto job scripts issue #142 generate station i,j grid issue #142 generate station i,j grid issue #142 generate station i,j grid issue #142 add 6 bufr station data issue #142 add 6 bufr stations for Thailand TMD issue #145 change dev path to prod for parallel netcdf modules issue #145 change dev path to prod for parallel netcdf modules Issue #1 - updates for modules and small fixes reverting changes to configs that were not intented to be committed fix resource time estimates bug fix in exgfs_wave_post_pnt.sh update resources and trigger from 192->180 last of EE2 changes updates for EE2 from waves Issue #94 fix for failing silently Issue #1 - update WAFS tag to gfs_wafs.v6.0.8 Issue #94 add native grids as default grids Issue #1: update name of ncdiag executable and source code directory to be conistent cleaning up the rearranged scripts Jobs were tested with PDY 20200925, code managers from post, gempak, wave, and post process certified the test run result. Issue #1: update parm/config.vrfy to define VSDBJOBSH (used by jobs/rocoto/vrfy.sh) Code manager indicated all wafs jobs wall clock is 30 mins. Code manager indicated job card for scripts/gfs/atmos/gempak/jgfs_atmos_pgrb2_spec_gempak.ecf need to be changed The EMC realtime parallel does not use operational job settings. Ecflow job card roll back the setting from module_used_gfs-16_job google sheet document. Update GLDAS tag to gldas_gfsv16_release.v1.10.0 Update gfswafs job to run with loop over fcsthrs Issue #1: update vrfy.sh to submit vsdb processing as separate job (only on WCOSS_DELL_P3) Issue #94 add /fakedbn to run DBN_alerts Update config.awips for newly named JJOB scripts Update WAFS jobs/rocoto scripts to use new JJOB names Making J-Job naming change accourding to code manager. Remove temp files Update post.sh UPP JJOB script name to submit Modify each ecflow script with old j-job name for test. Update config.base.nco.static with config.base.emc.dyn changes Script name updates for sfc_prep and tracker Name change for tropcy scripts and update WAFS tag Fixing spelling mistake in config.gldas Updated drivers and release notes Updated scripts Update Externals.cfg with new UPP tag upp_gfsv16_release.v1.0.16. 1)Update sorc/checkout.sh with new UPP tag upp_gfsv16_release.v1.0.16. 2)Update sorc/link_fv3gfs.sh with new file name convention for jjob and ex-script of post processing part. Updated jobs name Update EMC_verif-global tag to verif_global_v1.11.0 Rename scripts to match ecf script naming convention. Add SENDDBN and DBNROOT. Update GLDAS tag. In anticipating changes from the GLDAS repo : renaming JGDAS_GLDAS to JGDAS_ATMOS_GLDAS, and exgdas_gldas.sh to exgdas_atmos_gldas.sh renamed: jobs/JGFS_POSTSND -> jobs/JGFS_ATMOS_POSTSND renamed: scripts/exgfs_postsnd.sh -> scripts/exgfs_atmos_postsnd.sh modified: docs/archive/README_bufr driver/product/run_postsnd.sh driver/product/run_postsnd.sh.cray driver/product/run_postsnd.sh.dell driver/product/run_postsnd.sh.hera driver/product/run_postsnd.sh.jet parm/config/config.postsnd renamed: scripts/exglobal_fcst_nemsfv3gfs.sh -> scripts/exglobal_forecast.sh and modified jobs/JGLOBAL_FORECAST parm/config/config.fcst updates for optimizing point jobs Issue #1 - update SEND variables and add DBNROOT to base configs and add check to build_enkf_chgres_recenter_nc.sh for GSI build Issue #1 - update to UFS_UTILS ops-gfsv16.0.0 tag Issue #1 - fix to link_fv3gfs.sh for new GLDAS tag Issue #131 Unify dbn_alert path Issue #1: update to UPP tag "upp_gfsv16_release.v1.0.15" Fix for running prep on Hera ecflow full day cycle included Update WAFS tag to gfs_wafs.v6.0.6 Small updates: - new UPP tag - new GLDAS tag - new WAFS tag - new module for WAFS - EE2 updates to awips scripts - added WAFS to archival - break downstream and WAFS archival into separate gfs_downstream tarball - update gfsarch dependencies to wait for all wavepost jobs to complete Issue #131 reduce scripts output to logfile Issue #131 added a path to DBNROOT Adding wafs wave and downstream jobs updates for by hour post Issue #1: add fhrgrp and fhrlst back to gfsawips in setup_workflow.py (bugfix) adding the line to go back a day for RTOFS for the if not NCO section because RTOFS will not be available until 06 cycle Restructured ecflow - up to post step deleted relocate_mv_nvortex.fd since storm relocation is no longer needed. modified build_tropcy_NEMS.sh to remove references to relocate_mv_nvortex Issue #1: correct DA typos in sorc/link_fv3gfs.sh Increase walltime for new wavepost jobs Issue #1: update name of DA jobs and scripts in accordance with WCOSS Implementation Standards Issue #94 add waves-prdgen, ICE->ICEC, Sleep in gempak script add gfs gempak downstream jobs into def file worked on wcoss ecflow script rename after redesign approved - not including all wave jobs Issue #1: clean up DA sections of link_fv3gfs.sh fix from Bhavani for having first wave grib file be set as a forecast instead of analysis fix from Bhavani for having first wave grib file be set as a forecast instead of analysis fix from Bhavani for having first wave grib file be set as a forecast instead of analysis ecflow gfs v16 nco review 3 updates to split boundary points plus saving config file updates Adding missing space to if-block in env files to resolve runtime failure Issue #1: remove pgrb2b.0p25 dependency from gfsawips in setup_workflow.py ecflow gfsv16 redesign 2 Issue #1 - update WAFS tag to gfs_wafs.v6.0.4 and remove HOURLY variable from WAFS configs Issue #1 - change wavegempak and waveawipsgridded dependency to match waveawipsbulls and start when wavepostsbs is complete Issue #1: set n_sponge=42 in gfs section of config.fcst adding pnt jobs as seperate jobs for env moving definitions of wavempexec and wave_mpmd from jobs to env Remove unneeded settings from config.post Added null DBNROOT to wave awips configs add extra script for by hour points for waves updates for boundary points by hour parallelization lowering the resource requirement for wave prep job Issue #1: rename enkf_chgres_recenter executables in accordance with WCOSS Implementation Standards modified: checkout.sh to use gldas_gfsv16_release.v1.6.0 update module for cdo Update to WAFS tag and added SENDDBN_NTC to both base configs modified: link_fv3gfs.sh to not link or copy 0readme fix_chem fix_fv3 fix_sfc_climo which are not used by GFS.v16 and are of large size modified: link_fv3gfs.sh to remove chgres_cube.fd and chgres_cube.fd in sorc/link_fv3gfs.sh modified: link_fv3gfs.sh to allow "fix" directories to be removed before rerunning link_fv3gfs.sh for RUN_ENVIR=nco case Added WAFS jobs to free-forecast mode, updates for extending WAFS to fh120, and two bug fixes in link_fv3gfs.sh and hpssarch_gen.sh Renamed global-workflow-owned ex-scripts to remove ecf extension and updated other scripts which call those ex-scripts Remove UFS_UTILS ecf extensions Issue #1: (1) update earc.sh directory removal to be consistent with arch.sh, (2) update config files to be consistent with EMC real-time GFS v16 parallel Remove ecf script name extensions from downstream wave scripts Add new downstream wave jobs to workflow Add new downstream WAFS jobs Issue #1 - update GLDAS and UPP workflow files for removal of ecf script extension Issue #1: remove ".ecf" suffix from DA scripts referenced in sorc/link_fv3gfs.sh Issue #1: remove ".ecf" extension from DA exscripts (as per WCOSS Implementation Standards) referenced from parm/config files updates to resources for wave jobs Issue #1: update name of DA enkf chgres script in config.echgres Issue #1: Rename DA enkf chgres job and script as per EE2 guidance Workflow changes for wave gempak and awips downstream jobs Fixing wavepostbndpnt dependency in setup_workflow_fcstonly.py ... * conflicts resolved Refs: #1
aerorahul
pushed a commit
that referenced
this issue
Jul 12, 2022
GitHub Issue NOAA-EMC/GSI#118. EFSOI additions to scripts directory for issue.
aerorahul
pushed a commit
that referenced
this issue
Jul 12, 2022
GitHub Issue NOAA-EMC/GSI#118. EFSOI additions to scripts directory for issue.
kayeekayee
pushed a commit
to kayeekayee/global-workflow
that referenced
this issue
May 30, 2024
…A-EMC#145) * atmos_model.F90: remove dependency of stochastic physics on IPD_Control * Add mpi_wrapper to stochastic_physics to substitute calls to fv_mp_mod routines * Make cellular automata code independent of fv_mp_mod * Make cellular automata code independent of atmosphere_mod * Add halo exchange routine to stochastic_physics code * Remove dependency on GFS_coupling_type from stochastic_physics.F90 * Remove dependency on GFS_grid_type in stochastic_physics and stochastic_physics_sfc * Cleanup work, avoid unnecessary data copies * Move stochastic physics code into its own wrapper/driver * Remove dependency on Statein, Coupling and Intdiag DDT from cellular_automata_sgs.F90 * Compile kinddef module, cleanup stochastic_physics_wrapper.F90 * Update cmake build system * Fix a bug in atmos_model.F90, inadvertetly removed a closing parenthesis * Update to build system for stochastic_physics_wrapper following cmake updates * Update gnumake build to include stochastic_physics wrapper * Remove commented out lines from stochastic_physics/makefile Co-authored-by: Jun Wang <jun.wang@noaa.gov>
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Per NCO ecflow requirements, all non-prod modules must be changed to prod paths.
The text was updated successfully, but these errors were encountered: