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Coupled/devmerge 3 #219

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Dec 16, 2020
Merged

Coupled/devmerge 3 #219

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89ef16e
update for making post work without inline post
JessicaMeixner-NOAA Dec 14, 2020
eb9cb24
add in linking capabilities
JessicaMeixner-NOAA Dec 14, 2020
c1e6686
updating module file so that atm pos will work (#214)
JessicaMeixner-NOAA Dec 15, 2020
1a9bc78
Merge remote-tracking branch 'EMC/feature/coupled-crow' into coupled/…
JessicaMeixner-NOAA Dec 15, 2020
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60 changes: 26 additions & 34 deletions modulefiles/module_base.orion
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Original file line number Diff line number Diff line change
Expand Up @@ -9,54 +9,38 @@
module load contrib noaatools

##
module load cmake/3.17.3
setenv CMAKE_C_COMPILER mpiicc
setenv CMAKE_CXX_COMPILER mpiicpc
setenv CMAKE_Fortran_COMPILER mpiifort
setenv CMAKE_Platform orion.intel


module use /apps/contrib/NCEP/libs/hpc-stack/v1.0.0-beta1/modulefiles/stack

module load hpc/1.0.0-beta1
module load hpc-intel/2018.4
module load hpc-impi/2018.4

## load programming environment
## this typically includes compiler, MPI and job scheduler
##
module load intel/2018
module load impi/2018

#For ocean post:
module load ncl/6.6.2
module load nco/4.8.1

module load jasper/2.0.15
module load zlib/1.2.11
module load png/1.6.35

module load hdf5/1.10.6
module load netcdf/4.7.4
module load pio/2.5.1
module load esmf/8_1_0_beta_snapshot_27

module load bacio/2.4.1
module load crtm/2.3.0
module load g2/3.4.1
module load g2tmpl/1.9.1
module load ip/3.3.3
module load nceppost/dceca26
module load nemsio/2.5.2
module load sp/2.3.3
module load w3emc/2.7.3
module load w3nco/2.4.1

##
## NCEP libraries for atm post and other
## NCEP libraries (temporary version to match the CCPP requirements)
##
module use -a /apps/contrib/NCEPLIBS/orion/cmake/install/NCEPLIBS/modules
module load bacio/2.4.0
module load crtm_dev/2.3.0
module load g2/3.4.0
module load g2tmpl/1.9.0
module load ip/3.3.0
module load nceppost/dceca26
module load nemsio/2.5.1
module load sp/2.3.0
module load w3emc/2.7.0
module load w3nco/2.4.0

module load gfsio/1.4.0
module load sfcio/1.4.0
module load sigio/2.3.0

module use /apps/contrib/NCEPLIBS/orion/modulefiles
module load jasper/1.900.2
module load png/1.2.44
module load z/1.2.6

module load prod_util/1.2.0
Expand All @@ -74,3 +58,11 @@ module load grib_util/1.2.0

module load slurm/19.05.3-2

##
### load cmake
###
module load cmake/3.15.4
setenv CMAKE_C_COMPILER mpiicc
setenv CMAKE_CXX_COMPILER mpiicpc
setenv CMAKE_Fortran_COMPILER mpiifort
setenv CMAKE_Platform orion.intel
4 changes: 2 additions & 2 deletions sorc/link_fv3gfs.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@ if [ ! -z $FIX_DIR ]; then
fi
cd ${pwd}/../fix ||exit 8
if [ $model = "coupled" ] ; then
for dir in fix_am fix_fv3_gmted2010 fix_gldas fix_orog fix_verif fix_cice fix_mom6 fix_cpl fix_wave fix_reg2grb2 ; do
for dir in fix_am fix_fv3_gmted2010 fix_fv3_fracoro fix_gldas fix_orog fix_verif fix_cice fix_mom6 fix_cpl fix_wave fix_reg2grb2 ; do
if [ -d $dir ]; then
[[ $RUN_ENVIR = nco ]] && chmod -R 755 $dir
rm -rf $dir
Expand Down Expand Up @@ -101,7 +101,7 @@ cd ${pwd}/../parm ||exit 8
cd ${pwd}/../scripts ||exit 8
$LINK ../sorc/gfs_post.fd/scripts/exgdas_atmos_nceppost.sh .
if [ $model = "coupled" ]; then
$LINK exgfs_nceppost_cpl.sh.ecf exgfs_nceppost.sh.ecf
$LINK exgfs_nceppost_cpl.sh.ecf exgfs_atmos_nceppost.sh
else
$LINK ../sorc/gfs_post.fd/scripts/exgfs_atmos_nceppost.sh .
fi
Expand Down
1 change: 1 addition & 0 deletions workflow/cases/coupled_free_forecast.yaml
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Expand Up @@ -14,6 +14,7 @@ case:
print_esmf: .true.
nems_temp: 'cpld'
mom6ic_prepared: .false.
inline_post: .false.
KEEPDATA: YES
ic_source: coupled_ic

Expand Down
1 change: 1 addition & 0 deletions workflow/cases/coupled_free_forecast_wave.yaml
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Expand Up @@ -16,6 +16,7 @@ case:
print_esmf: .true.
nems_temp: 'cpld_wave'
mom6ic_prepared: .false.
inline_post: .false.
KEEPDATA: NO

nsst:
Expand Down
4 changes: 2 additions & 2 deletions workflow/layout/free_forecast_gfs.yaml
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Expand Up @@ -134,7 +134,7 @@ suite: !Cycle
ecflow_def: !expand "edit FHR '{FHR}'"
release_pgrb2_anl: !DataEvent {file="/dev/null"}
resources: !calc partition.resources.run_gfspost
J_JOB: JGLOBAL_NCEPPOST
J_JOB: JGLOBAL_ATMOS_NCEPPOST
ecflow_command: !expand |
export post_times=%FHR% FHRLST=%FHR% FHRGRP=%FHR%
$HOMEgfs/jobs/{J_JOB}
Expand All @@ -149,7 +149,7 @@ suite: !Cycle
resources: !calc partition.resources.run_gfspost
Name: !expand p_{dimval.fhr:03d}
FHR: !expand "{dimval.fhr:03d}"
J_JOB: JGLOBAL_NCEPPOST
J_JOB: JGLOBAL_ATMOS_NCEPPOST
Trigger: !FirstTrue
- when: !calc not doc.settings.dev_safeguards
take: !Depend jgfs_post_manager.depend("release_post{F:03d}",F=[dimval.fhr])
Expand Down