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Update develop branch: new versions, packages, package locations, fixes #460

Update develop branch: new versions, packages, package locations, fixes

Update develop branch: new versions, packages, package locations, fixes #460

Workflow file for this run

name: Build Intel
on:
pull_request:
workflow_dispatch:
# Use custom shell with -l so .bash_profile is sourced which loads intel/oneapi/setvars.sh
# without having to do it in manually every step
defaults:
run:
shell: bash -le {0}
jobs:
build:
env:
VERBOSE: 1
runs-on: ubuntu-20.04
steps:
# See https://software.intel.com/content/www/us/en/develop/articles/oneapi-repo-instructions.html
- name: Install intel
run: |
cd /tmp
wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
rm GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo apt-get update
sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-mpi-devel intel-oneapi-openmp intel-oneapi-compiler-fortran intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic
echo "source /opt/intel/oneapi/setvars.sh" >> ~/.bash_profile
- name: Install LMod
run: |
sudo apt-get install lua5.3 lua-posix-dev liblua5.3-dev tcl tcl-dev
wget https://github.com/TACC/Lmod/archive/refs/tags/8.5.7.tar.gz
tar -xf 8.5.7.tar.gz
cd Lmod-8.5.7
./configure
make
sudo make install
echo "source /usr/local/lmod/lmod/init/bash" >> ~/.bash_profile
- name: Install dependencies
run: |
sudo python3 -m pip install -U pip setuptools
sudo python3 -m pip install -U numpy
sudo python3 -m pip install -U netCDF4
- name: Get sources
uses: actions/checkout@v3
with:
path: hpc-stack
- name: Build
run: |
cd hpc-stack
prefix=$GITHUB_WORKSPACE/install
intel_ver=$( icc -dumpversion )
python_ver=$( python3 --version | cut -d " " -f2 | cut -d. -f1-2 )
export HPC_COMPILER="intel/${intel_ver}"
export HPC_MPI="impi/${intel_ver}"
export HPC_PYTHON="python/${python_ver}"
yes | ./setup_modules.sh -c config/config_custom.sh -p $prefix
./build_stack.sh -p $prefix -c config/config_custom.sh -y stack/stack_custom.yaml -m
- name: Upload logs
if: ${{ always() }}
uses: actions/upload-artifact@v2
with:
name: intel-log
path: intel/log
- name: Clean disk space of downloaded packages
if: ${{ success() }}
run: |
cd hpc-stack
rm -rf pkg