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nix-prefetch-git: Fix inconsistency with fetchgit regarding deepClone
The fetchgit function in nixpkgs sets the leaveDotGit argument to true if deepClone is set to true. nix-prefetch-git did behave differently. It would not assume --leave-dotGit if --deepClone is specified. With this change the inconsistency is addressed by assuming --leave-dotGit if --deepClone is specified.
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