diff --git a/pkgs/development/tools/build-managers/bazel/bazel_3/default.nix b/pkgs/development/tools/build-managers/bazel/bazel_3/default.nix
index 1f51fceff3b55..a08f7a62eae68 100644
--- a/pkgs/development/tools/build-managers/bazel/bazel_3/default.nix
+++ b/pkgs/development/tools/build-managers/bazel/bazel_3/default.nix
@@ -405,8 +405,8 @@ stdenv.mkDerivation rec {
       substituteInPlace tools/objc/j2objc_dead_code_pruner.py --replace "$!/usr/bin/python2.7" "#!${python27}/bin/python"
 
       # md5sum is part of coreutils
-      sed -i 's|/sbin/md5|md5sum|' \
-        src/BUILD
+      sed -i 's|/sbin/md5|md5sum|g' \
+        src/BUILD third_party/ijar/test/testenv.sh tools/objc/libtool.sh
 
       # replace initial value of pythonShebang variable in BazelPythonSemantics.java
       substituteInPlace src/main/java/com/google/devtools/build/lib/bazel/rules/python/BazelPythonSemantics.java \
diff --git a/pkgs/development/tools/build-managers/bazel/bazel_4/default.nix b/pkgs/development/tools/build-managers/bazel/bazel_4/default.nix
index 36f7ffb8a5d30..f2006fdc6d180 100644
--- a/pkgs/development/tools/build-managers/bazel/bazel_4/default.nix
+++ b/pkgs/development/tools/build-managers/bazel/bazel_4/default.nix
@@ -434,8 +434,8 @@ stdenv.mkDerivation rec {
       substituteInPlace tools/objc/j2objc_dead_code_pruner.py --replace "$!/usr/bin/python2.7" "#!${python27}/bin/python"
 
       # md5sum is part of coreutils
-      sed -i 's|/sbin/md5|md5sum|' \
-        src/BUILD
+      sed -i 's|/sbin/md5|md5sum|g' \
+        src/BUILD third_party/ijar/test/testenv.sh tools/objc/libtool.sh
 
       # replace initial value of pythonShebang variable in BazelPythonSemantics.java
       substituteInPlace src/main/java/com/google/devtools/build/lib/bazel/rules/python/BazelPythonSemantics.java \