add riverine C-isotope input #479
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| name: Continuous Integration testing | |
| on: [push, pull_request] | |
| env: | |
| # This version of Meson should be available as an EasyBuild on Fram and Betzy | |
| MESON_VERSION: '0.55.1' | |
| jobs: | |
| build: | |
| name: Build BLOM on Github provided OS | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| mpi: [true, false] | |
| openmp: ['enabled', 'disabled'] | |
| exclude: | |
| # Do not build on macOS with MPI as that is having some dependency issues | |
| - os: macos-latest | |
| mpi: true | |
| steps: | |
| - name: Install dependencies - Ubuntu | |
| run: | | |
| sudo apt update | |
| sudo apt install -y libnetcdff-dev mpi-default-dev ninja-build | |
| if: runner.os == 'Linux' | |
| - name: Install dependencies - macOS | |
| run: brew install netcdf-fortran open-mpi ninja | |
| env: | |
| HOMEBREW_NO_INSTALL_CLEANUP: 1 | |
| if: runner.os == 'macOS' | |
| - name: Setup Python for newer version of Meson | |
| uses: actions/setup-python@v2 | |
| - name: Install Meson | |
| run: python -m pip install meson==${{ env.MESON_VERSION }} | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| submodules: 'recursive' | |
| - name: Build | |
| env: | |
| CC: gcc-12 | |
| FC: gfortran-12 | |
| run: | | |
| meson setup builddir -Dmpi=${{ matrix.mpi }} -Dopenmp=${{ matrix.openmp }} --buildtype=debugoptimized | |
| meson compile -C builddir | |
| - name: Test code | |
| if: ${{ matrix.mpi == false }} | |
| run: | | |
| ulimit -s 65532 | |
| meson test -C builddir | |
| - name: Upload test log | |
| if: ${{ matrix.mpi == false }} | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: testlog-${{ runner.os }}-gcc | |
| path: builddir/meson-logs/testlog.txt | |
| intel: | |
| name: Build BLOM using Intel compilers | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| mpi: [true, false] | |
| openmp: ['enabled', 'disabled'] | |
| # Tell Meson to use Intel compilers | |
| env: | |
| CC: icc | |
| FC: ifort | |
| NFDIR: '/opt/netcdf' | |
| steps: | |
| - name: Install dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y ninja-build libnetcdf-dev | |
| - name: Cache Intel setup | |
| id: cache-intel | |
| uses: actions/cache@v2 | |
| with: | |
| path: /opt/intel/ | |
| key: intel-${{ runner.os }}-compiler | |
| - name: Setup Intel compiler | |
| if: steps.cache-intel.outputs.cache-hit != 'true' | |
| run: | | |
| wget -q https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB | |
| sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS-2023.PUB | |
| sudo add-apt-repository "deb https://apt.repos.intel.com/oneapi all main" | |
| sudo apt update | |
| sudo apt install -y\ | |
| intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic\ | |
| intel-oneapi-compiler-fortran intel-oneapi-mpi-devel | |
| - name: Cache netCDF install | |
| id: cache-netcdf | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.NFDIR }} | |
| key: netcdf-4.5.2-${{ runner.os }}-intel | |
| - name: Checkout netCDF for compiling with Intel | |
| if: steps.cache-netcdf.outputs.cache-hit != 'true' | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: 'Unidata/netcdf-fortran' | |
| ref: 'v4.5.2' | |
| - name: Compile and install custom netCDF | |
| if: steps.cache-netcdf.outputs.cache-hit != 'true' | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| ./configure --prefix="$NFDIR" | |
| make | |
| sudo make install | |
| - name: Setup netCDF environment | |
| run: | | |
| echo "${NFDIR}/bin" >> $GITHUB_PATH | |
| echo "PKG_CONFIG_PATH=${NFDIR}/lib/pkgconfig" >> $GITHUB_ENV | |
| - name: Setup Python for newer version of Meson | |
| uses: actions/setup-python@v2 | |
| - name: Install Meson | |
| run: python -m pip install meson==${{ env.MESON_VERSION }} | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| with: | |
| submodules: 'recursive' | |
| - name: Build with Intel compilers | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| meson setup builddir -Dmpi=${{ matrix.mpi }} -Dopenmp=${{ matrix.openmp }} --buildtype=debugoptimized | |
| meson compile -C builddir | |
| - name: Test code | |
| if: ${{ matrix.mpi == false }} | |
| run: | | |
| source /opt/intel/oneapi/setvars.sh | |
| meson test -C builddir | |
| - name: Upload test log | |
| uses: actions/upload-artifact@v2 | |
| if: ${{ matrix.mpi == false }} | |
| with: | |
| name: testlog-${{ runner.os }}-intel | |
| path: builddir/meson-logs/testlog.txt |