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dependencies for nimblas@0.2.2 Info: Dependency on nimlapack@>= 0.1.1 already satisfied Verifying dependencies for nimlapack@0.2.1 Info: Dependency on nimcuda@>= 0.1.4 already satisfied Verifying dependencies for nimcuda@0.1.8 Info: Dependency on nimcl@>= 0.1.3 already satisfied Verifying dependencies for nimcl@0.1.3 Info: Dependency on opencl@>= 1.0 already satisfied Verifying dependencies for opencl@1.0 Info: Dependency on clblast@any version already satisfied Verifying dependencies for clblast@0.0.1 Info: Dependency on opencl@any version already satisfied Verifying dependencies for opencl@1.0 Info: Dependency on stb_image@any version already satisfied Verifying dependencies for stb_image@2.5 Info: Dependency on zip@any version already satisfied Verifying dependencies for zip@0.3.1 Info: Dependency on untar@any version already satisfied Verifying dependencies for untar@0.1.0 Info: Dependency on polynumeric@>= 0.2.0 already satisfied Verifying dependencies for polynumeric@0.2.1 Info: 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already satisfied Verifying dependencies for untar@0.1.0 Info: Dependency on nimpy@>= 0.2.0 already satisfied Verifying dependencies for nimpy@0.2.0 Info: Dependency on nimpy@>= 0.2.0 already satisfied Verifying dependencies for nimpy@0.2.0 Info: Dependency on nimjl@>= 0.6.3 already satisfied Verifying dependencies for nimjl@0.7.6 Info: Dependency on arraymancer@>= 0.7.0 already satisfied Verifying dependencies for arraymancer@0.7.19 Info: Dependency on nimblas@>= 0.2.2 already satisfied Verifying dependencies for nimblas@0.2.2 Info: Dependency on nimlapack@>= 0.1.1 already satisfied Verifying dependencies for nimlapack@0.2.1 Info: Dependency on nimcuda@>= 0.1.4 already satisfied Verifying dependencies for nimcuda@0.1.8 Info: Dependency on nimcl@>= 0.1.3 already satisfied Verifying dependencies for nimcl@0.1.3 Info: Dependency on opencl@>= 1.0 already satisfied Verifying dependencies for opencl@1.0 Info: Dependency on clblast@any version already satisfied Verifying dependencies for clblast@0.0.1 Info: Dependency on opencl@any version already satisfied Verifying dependencies for opencl@1.0 Info: Dependency on stb_image@any version already satisfied Verifying dependencies for stb_image@2.5 Info: Dependency on zip@any version already satisfied Verifying dependencies for zip@0.3.1 Info: Dependency on untar@any version already satisfied Verifying dependencies for untar@0.1.0 Building scinim_getting_started/getting_started using c backend [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir = "book" homeDir = "docs" [nimibook] language = "" title = "SciNim Getting Started" description = "Tutorials for libraries in SciNim ecosystems" S O == Table Of Contents == (S: Source, O: Output) ✅❌ 1. [Introduction](index.md) ✅❌ 2. [Ecosystem overview](overview/index.md) ✅❌ 3. [Basic topics](basics/index.md) ✅❌ 3.1. [Common datatypes](basics/common_datatypes.nim) ✅❌ 3.2. [Data wrangling with dataframes](basics/data_wrangling.nim) ✅❌ 3.3. [Plotting](basics/basic_plotting.nim) ✅❌ 3.4. [Units](basics/units_basics.nim) ✅❌ 4. [Numerical methods](numerical_methods/index.md) ✅❌ 4.1. [Curve fitting](numerical_methods/curve_fitting.nim) ✅❌ 4.2. [Integration (1D)](numerical_methods/integration1d.nim) ✅❌ 4.3. [ODEs](numerical_methods/ode.nim) ✅❌ 4.4. [Optimization](numerical_methods/optimization.nim) ✅❌ 4.5. [Interpolation](numerical_methods/interpolation.nim) ✅❌ 5. [Data visualization](data_viz/index.md) ✅❌ 5.1. [Plotting data](data_viz/plotting_data.nim) ✅❌ 6. [Interfacing with other language](external_language_integration/index.md) ✅❌ 6.1. [Nimpy - The Nim Python bridge](external_language_integration/nim_with_py.nim) ✅❌ 6.2. [Nimjl - The Nim Julia bridge](external_language_integration/julia/basics.nim) ✅❌ 6.2.1. [Advanced types](external_language_integration/julia/nimjl_conversions.nim) ✅❌ 6.2.2. [Julia Arrays from Nim](external_language_integration/julia/nimjl_arrays.nim) ✅❌ 6.3. [Interfacing with R](external_language_integration/nim_with_R.nim) == 21 entries == [nimibook] setting current directory to cfgDir: /home/ol/getting-started [nimibook] creating assets directory: docs/assets [nimibook] entry already exists: book/index.md [nimibook] entry already exists: book/overview/index.md [nimibook] entry already exists: book/basics/index.md [nimibook] entry already exists: book/basics/common_datatypes.nim [nimibook] entry already exists: book/basics/data_wrangling.nim [nimibook] entry already exists: book/basics/basic_plotting.nim [nimibook] entry already exists: book/basics/units_basics.nim [nimibook] entry already exists: book/numerical_methods/index.md [nimibook] entry already exists: book/numerical_methods/curve_fitting.nim [nimibook] entry already exists: book/numerical_methods/integration1d.nim [nimibook] entry already exists: book/numerical_methods/ode.nim [nimibook] entry already exists: book/numerical_methods/optimization.nim [nimibook] entry already exists: book/numerical_methods/interpolation.nim [nimibook] entry already exists: book/data_viz/index.md [nimibook] entry already exists: book/data_viz/plotting_data.nim [nimibook] entry already exists: book/external_language_integration/index.md [nimibook] entry already exists: book/external_language_integration/nim_with_py.nim [nimibook] entry already exists: book/external_language_integration/julia/basics.nim [nimibook] entry already exists: book/external_language_integration/julia/nimjl_conversions.nim [nimibook] entry already exists: book/external_language_integration/julia/nimjl_arrays.nim [nimibook] entry already exists: book/external_language_integration/nim_with_R.nim [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir = "book" homeDir = "docs" [nimibook] language = "" title = "SciNim Getting Started" description = "Tutorials for libraries in SciNim ecosystems" S O == Table Of Contents == (S: Source, O: Output) ✅❌ 1. [Introduction](index.md) ✅❌ 2. [Ecosystem overview](overview/index.md) ✅❌ 3. [Basic topics](basics/index.md) ✅❌ 3.1. [Common datatypes](basics/common_datatypes.nim) ✅❌ 3.2. [Data wrangling with dataframes](basics/data_wrangling.nim) ✅❌ 3.3. [Plotting](basics/basic_plotting.nim) ✅❌ 3.4. [Units](basics/units_basics.nim) ✅❌ 4. [Numerical methods](numerical_methods/index.md) ✅❌ 4.1. [Curve fitting](numerical_methods/curve_fitting.nim) ✅❌ 4.2. [Integration (1D)](numerical_methods/integration1d.nim) ✅❌ 4.3. [ODEs](numerical_methods/ode.nim) ✅❌ 4.4. [Optimization](numerical_methods/optimization.nim) ✅❌ 4.5. [Interpolation](numerical_methods/interpolation.nim) ✅❌ 5. [Data visualization](data_viz/index.md) ✅❌ 5.1. [Plotting data](data_viz/plotting_data.nim) ✅❌ 6. [Interfacing with other language](external_language_integration/index.md) ✅❌ 6.1. [Nimpy - The Nim Python bridge](external_language_integration/nim_with_py.nim) ✅❌ 6.2. [Nimjl - The Nim Julia bridge](external_language_integration/julia/basics.nim) ✅❌ 6.2.1. [Advanced types](external_language_integration/julia/nimjl_conversions.nim) ✅❌ 6.2.2. [Julia Arrays from Nim](external_language_integration/julia/nimjl_arrays.nim) ✅❌ 6.3. [Interfacing with R](external_language_integration/nim_with_R.nim) == 21 entries == [nimibook] setting current directory to cfgDir: /home/ol/getting-started [nimibook] dumping docs/book.json [nimibook] build entry: index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: ./index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # SciNim Get... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: ./index.html [nimibook] build entry: overview/index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/overview/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: overview/index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Overview o... [nimib] current directory: /home/ol/getting-started/docs [nimib] creating directory: overview [nimib] saving file: overview/index.html [nimibook] build entry: basics/index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/basics/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: basics/index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Basics... [nimib] current directory: /home/ol/getting-started/docs [nimib] creating directory: basics [nimib] saving file: basics/index.html [nimibook] build entry: basics/common_datatypes.nim [Executing] nim r book/basics/common_datatypes.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.016s; 10.75MiB peakmem; proj: /home/ol/getting-started/book/basics/common_datatypes.nim; out: /home/ol/.cache/nim/common_datatypes_d/common_datatypes_365DDAC03BA516B85C627A6A22BAEA8944471ADF [SuccessX] Hint: /home/ol/.cache/nim/common_datatypes_d/common_datatypes_365DDAC03BA516B85C627A6A22BAEA8944471ADF [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: basics/common_datatypes.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Basic data... [nimib] 1 nbCode: let x = @[0.... -> @[0.0, 1.0, ... [nimib] 2 nbText: -> The first co... [nimib] 3 nbCode: var x = newS... -> Length: 0... [nimib] 4 nbText: -> The second w... [nimib] 5 nbCode: var x = newS... -> @[0.0, 0.0, ... [nimib] 6 nbText: -> `x` then use... [nimib] 7 nbCode: let x = @[0.... -> 2.0... [nimib] 8 nbText: -> ### Mutation... [nimib] 9 nbCode: var x = newS... -> @[5.0, 0.0, ... [nimib] 10 nbText: -> ... [nimib] 11 nbCode: var x = newS... -> @[10.0]... [nimib] 12 nbText: -> So `y1` now ... [nimib] 13 nbCode: let x1 = @[0... -> Starting fro... [nimib] 14 nbText: -> See how the ... [nimib] 15 nbCode: var x = newS... [nimib] 16 nbText: -> A naive impl... [nimib] 17 nbCode: var x = newS... -> Length: 0... [nimib] 18 nbText: -> As we can se... [nimib] 19 nbCode: var x = newS... [nimib] 20 nbText: -> So this oper... [nimib] 21 nbCode: import sequt... -> @[5.5, 5.5, ... [nimib] 22 nbText: -> which takes ... [nimib] 23 nbCode: echo newSeqW... -> @[@[5, 5, 5]... [nimib] 24 nbText: -> which gives ... [nimib] 25 nbCode: echo toSeq(1... -> @[10, 11, 12... [nimib] 26 nbText: -> This essenti... [nimib] 27 nbCode: echo toSeq(1... -> @[10.0, 11.0... [nimib] 28 nbText: -> Returns a se... [nimib] 29 nbCode: import numer... -> @[1.0, 1.25,... [nimib] 30 nbText: -> Finally, one... [nimib] 31 nbCode: import rando... -> @[2.75669127... [nimib] 32 nbText: -> samples 5 fl... [nimib] 33 nbCode: let x = @[ @... -> 4... [nimib] 34 nbText: -> The access `... [nimib] 35 nbCode: import array... [nimib] 36 nbText: -> First we can... [nimib] 37 nbCode: let t = newT... [nimib] 38 nbText: -> This is the ... [nimib] 39 nbCode: let t = newT... [nimib] 40 nbText: -> creates a te... [nimib] 41 nbCode: let t = newT... [nimib] 42 nbText: -> This essenti... [nimib] 43 nbCode: let t1 = zer... [nimib] 44 nbText: -> These are on... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: basics/common_datatypes.html [nimibook] build entry: basics/data_wrangling.nim [Executing] nim r book/basics/data_wrangling.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.016s; 10.746MiB peakmem; proj: /home/ol/getting-started/book/basics/data_wrangling.nim; out: /home/ol/.cache/nim/data_wrangling_d/data_wrangling_A759FA5F445C9E1E033504AC15DD7DF8FE9EEDBF [SuccessX] Hint: /home/ol/.cache/nim/data_wrangling_d/data_wrangling_A759FA5F445C9E1E033504AC15DD7DF8FE9EEDBF [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: basics/data_wrangling.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Data wrang... [nimib] 1 nbCode: import datam... [nimib] 2 nbText: -> ... [nimib] 3 nbCode: let s1 = [1,... -> DataFrame wi... [nimib] 4 nbText: -> which create... [nimib] 5 nbCode: let df3 = to... -> DataFrame wi... [nimib] 6 nbText: -> ... [nimib] 7 nbCode: var df = new... [nimib] 8 nbText: -> ... [nimib] 9 nbCode: let df = toD... [nimib] 10 nbText: -> where we ind... [nimib] 11 nbCode: let df = toD... -> 6... [nimib] 12 nbText: -> and in that ... [nimib] 13 nbCode: var df = new... -> DataFrame wi... [nimib] 14 nbText: -> which drops ... [nimib] 15 nbCode: let df = toD... -> DataFrame wi... [nimib] 16 nbText: -> ... [nimib] 17 nbCode: let df = toD... -> DataFrame wi... [nimib] 18 nbText: -> So we can se... [nimib] 19 nbCode: let df = toD... -> DataFrame wi... [nimib] 20 nbText: -> ... [nimib] 21 nbCode: let df = toD... -> DataFrame wi... [nimib] 22 nbText: -> ... [nimib] 23 nbCode: let df = toD... -> DataFrame wi... [nimib] 24 nbText: -> Of course we... [nimib] 25 nbCode: let df = toD... -> DataFrame wi... [nimib] 26 nbText: -> Note: There ... [nimib] 27 nbCode: let df = toD... -> DataFrame wi... [nimib] 28 nbText: -> ... [nimib] 29 nbCode: let df = toD... -> DataFrame wi... [nimib] 30 nbText: -> ... [nimib] 31 nbCode: let df = toD... -> DataFrame wi... [nimib] 32 nbText: -> Keen eyes wi... [nimib] 33 nbCode: let df = toD... -> Sub data fra... [nimib] 34 nbText: -> We can see w... [nimib] 35 nbCode: let df = toD... -> DataFrame wi... [nimib] 36 nbText: -> We can see... [nimib] 37 nbCode: let df = toD... -> DataFrame wi... [nimib] 38 nbText: -> and again,... [nimib] 39 nbCode: let df = toD... -> DataFrame wi... [nimib] 40 nbText: -> where we s... [nimib] 41 nbCode: let dfLong =... -> Long format:... [nimib] 42 nbText: -> As we can se... [nimib] 43 nbCode: let df = toD... -> DataFrame wi... [nimib] 44 nbText: -> which is exa... [nimib] 45 nbCode: let df1 = to... -> DataFrame wi... [nimib] 46 nbText: -> where we joi... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: basics/data_wrangling.html [nimibook] build entry: basics/basic_plotting.nim [Executing] nim r book/basics/basic_plotting.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.018s; 10.746MiB peakmem; proj: /home/ol/getting-started/book/basics/basic_plotting.nim; out: /home/ol/.cache/nim/basic_plotting_d/basic_plotting_8670F671E318DEBA420308E2C8E6FB03AFD05FDB [SuccessX] Hint: /home/ol/.cache/nim/basic_plotting_d/basic_plotting_8670F671E318DEBA420308E2C8E6FB03AFD05FDB [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: basics/basic_plotting.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Simple plo... [nimib] 1 nbCode: import ggplo... [nimib] 2 nbImage: [nimib] 3 nbText: -> Every plot i... [nimib] 4 nbText: -> ## Scatter p... [nimib] 5 nbCode: import ggplo... [nimib] 6 nbImage: [nimib] 7 nbText: -> Notice how s... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: basics/basic_plotting.html [nimibook] build entry: basics/units_basics.nim [Executing] nim r book/basics/units_basics.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.013s; 10.75MiB peakmem; proj: /home/ol/getting-started/book/basics/units_basics.nim; out: /home/ol/.cache/nim/units_basics_d/units_basics_64B7708DEA6458E7649E8D0A5CD1885638B0AB6B [SuccessX] Hint: /home/ol/.cache/nim/units_basics_d/units_basics_64B7708DEA6458E7649E8D0A5CD1885638B0AB6B [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: basics/units_basics.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Using and ... [nimib] 1 nbCode: import uncha... -> 1 lbf•s ... [nimib] 2 nbText: -> As you can s... [nimib] 3 nbText: -> ## Defining ... [nimib] 4 nbCode: ## Short ver... [nimib] 5 nbText: -> That was eas... [nimib] 6 nbCode: ## Correct w... [nimib] 7 nbText: -> ```nim... [nimib] 8 nbText: -> There is als... [nimib] 9 nbCode: proc f(x: fl... -> 10101.0... [nimib] 10 nbText: -> To get the u... [nimib] 11 nbCode: let mass = 1... -> true... [nimib] 12 nbText: -> ### Differen... [nimib] 13 nbCode: let unicodeU... -> true... [nimib] 14 nbCode: let unicodeU... -> true... [nimib] 15 nbText: -> ### Arithmet... [nimib] 16 nbCode: import math [nimib] 17 nbCode: proc y(t: Se... -> -10 cm... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: basics/units_basics.html [nimibook] build entry: numerical_methods/index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/numerical_methods/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: numerical_methods/index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Numerical ... [nimib] current directory: /home/ol/getting-started/docs [nimib] creating directory: numerical_methods [nimib] saving file: numerical_methods/index.html [nimibook] build entry: numerical_methods/curve_fitting.nim [Executing] nim r book/numerical_methods/curve_fitting.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.019s; 10.742MiB peakmem; proj: /home/ol/getting-started/book/numerical_methods/curve_fitting.nim; out: /home/ol/.cache/nim/curve_fitting_d/curve_fitting_F319694F000D802934080D429458C84592FE5C27 [SuccessX] Hint: /home/ol/.cache/nim/curve_fitting_d/curve_fitting_F319694F000D802934080D429458C84592FE5C27 [Exec] could not import: cblas_ddot Error: execution of an external program failed: '/home/ol/.cache/nim/curve_fitting_d/curve_fitting_F319694F000D802934080D429458C84592FE5C27 ' [nimibook.error] error while processing numerical_methods/curve_fitting.nim [nimibook] build entry: numerical_methods/integration1d.nim [Executing] nim r book/numerical_methods/integration1d.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.019s; 10.738MiB peakmem; proj: /home/ol/getting-started/book/numerical_methods/integration1d.nim; out: /home/ol/.cache/nim/integration1d_d/integration1d_49B3111953A6C73B7BAE9A17304E82F62EBDE3EF [SuccessX] Hint: /home/ol/.cache/nim/integration1d_d/integration1d_49B3111953A6C73B7BAE9A17304E82F62EBDE3EF [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: numerical_methods/integration1d.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # 1D Numeric... [nimib] 1 nbCode: import math,... [nimib] 2 nbText: -> As you can s... [nimib] 3 nbCode: let ctxPlot ... [nimib] 4 nbImage: [nimib] 5 nbText: -> ### Let the ... [nimib] 6 nbCode: let a = 0.0... -> Trapz Error:... [nimib] 7 nbText: -> It seems lik... [nimib] 8 nbCode: timeIt "Trap... -> min time ... [nimib] 9 nbText: -> As we can se... [nimib] 10 nbCode: let a = 0.0... -> Trapz Error:... [nimib] 11 nbImage: [nimib] 12 nbText: -> As we can se... [nimib] 13 nbCode: let a = 0.0... -> One point: 0... [nimib] 14 nbText: -> I think th... [nimib] 15 nbCode: var xSample ... [nimib] 16 nbImage: [nimib] 17 nbText: -> As you can s... [nimib] 18 nbCode: let exact = ... -> Exact: 29.... [nimib] 19 nbText: -> As expected ... [nimib] 20 nbCode: xSample = nu... -> Exact: 29.... [nimib] 21 nbImage: [nimib] 22 nbText: -> As expected ... [nimib] 23 nbCode: let a = 0.0... -> Trapz Error:... [nimib] 24 nbImage: [nimib] 25 nbText: -> ## Further r... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: numerical_methods/integration1d.html [nimibook] build entry: numerical_methods/ode.nim [Executing] nim r book/numerical_methods/ode.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.019s; 10.734MiB peakmem; proj: /home/ol/getting-started/book/numerical_methods/ode.nim; out: /home/ol/.cache/nim/ode_d/ode_8963572AC2EE96579150AC1186E813BB8BF141A6 [SuccessX] Hint: /home/ol/.cache/nim/ode_d/ode_8963572AC2EE96579150AC1186E813BB8BF141A6 [Exec] could not import: cblas_dgemm Error: execution of an external program failed: '/home/ol/.cache/nim/ode_d/ode_8963572AC2EE96579150AC1186E813BB8BF141A6 ' [nimibook.error] error while processing numerical_methods/ode.nim [nimibook] build entry: numerical_methods/optimization.nim [Executing] nim r book/numerical_methods/optimization.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.019s; 10.746MiB peakmem; proj: /home/ol/getting-started/book/numerical_methods/optimization.nim; out: /home/ol/.cache/nim/optimization_d/optimization_5EBA611D471E21D6558165398D044B480E252BC4 [SuccessX] Hint: /home/ol/.cache/nim/optimization_d/optimization_5EBA611D471E21D6558165398D044B480E252BC4 [Exec] could not import: cblas_ddot Error: execution of an external program failed: '/home/ol/.cache/nim/optimization_d/optimization_5EBA611D471E21D6558165398D044B480E252BC4 ' [nimibook.error] error while processing numerical_methods/optimization.nim [nimibook] build entry: numerical_methods/interpolation.nim [Executing] nim r book/numerical_methods/interpolation.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] ........................................................................................................................................................................................................... /home/ol/.nimble/pkgs/nimblas-0.2.2/nimblas/private/common.nim(50, 7) Hint: Using BLAS library with name: libblas.so(||.3|.2|.1|.0) [User] ............................................................................................................................. /home/ol/.nimble/pkgs/nimlapack-0.2.1/nimlapack.nim(18, 7) Hint: Using LAPACK library with name: liblapack.so(||.3|.2|.1|.0) [User] ........................................................................................................................................................................................... /home/ol/getting-started/book/numerical_methods/interpolation.nim(107, 3) template/generic instantiation of `nbCode` from here /home/ol/.nimble/pkgs/nimib-#head/nimib.nim(74, 18) template/generic instantiation of `captureStdout` from here /home/ol/getting-started/book/numerical_methods/interpolation.nim(108, 38) Error: undeclared identifier: 'Edge' candidates (edit distance, scope distance); see '--spellSuggest': (2, 4): 'kde' [module declared in /home/ol/.nimble/pkgs/arraymancer-0.7.19/arraymancer.nim(23, 28)] (2, 4): 'kde' [proc declared in /home/ol/.nimble/pkgs/arraymancer-0.7.19/arraymancer/stats/kde.nim(175, 6)] (2, 4): 'kde' [proc declared in /home/ol/.nimble/pkgs/arraymancer-0.7.19/arraymancer/stats/kde.nim(81, 6)] (2, 4): 'ode' [module declared in /home/ol/.nimble/pkgs/numericalnim-0.8.7/numericalnim.nim(5, 20)] [nimibook.error] error while processing numerical_methods/interpolation.nim [nimibook] build entry: data_viz/index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/data_viz/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: data_viz/index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Data visua... [nimib] current directory: /home/ol/getting-started/docs [nimib] creating directory: data_viz [nimib] saving file: data_viz/index.html [nimibook] build entry: data_viz/plotting_data.nim [Executing] nim r book/data_viz/plotting_data.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.018s; 10.75MiB peakmem; proj: /home/ol/getting-started/book/data_viz/plotting_data.nim; out: /home/ol/.cache/nim/plotting_data_d/plotting_data_D505D0836A2D719C6B0A013509DA02021F6A9C14 [SuccessX] Hint: /home/ol/.cache/nim/plotting_data_d/plotting_data_D505D0836A2D719C6B0A013509DA02021F6A9C14 [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: data_viz/plotting_data.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Plotting d... [nimib] 1 nbCode: ## ignore th... [nimib] 2 nbText: -> It may seem ... [nimib] 3 nbCode: import ggplo... -> Input data f... [nimib] 4 nbText: -> What we want... [nimib] 5 nbCode: ggplot(df, a... [nimib] 6 nbImage: [nimib] 7 nbText: -> So, uhm. Thi... [nimib] 8 nbCode: ggplot(df, a... [nimib] 9 nbImage: [nimib] 10 nbText: -> This looks a... [nimib] 11 nbCode: echo df[24 .... -> DataFrame wi... [nimib] 12 nbText: -> As we can se... [nimib] 13 nbCode: ggplot(df, a... [nimib] 14 nbImage: [nimib] 15 nbText: -> Ohh, interes... [nimib] 16 nbCode: ggplot(df, a... [nimib] 17 nbImage: [nimib] 18 nbText: -> Aha! Apparen... [nimib] 19 nbCode: ggplot(df, a... [nimib] 20 nbImage: [nimib] 21 nbText: -> This is alre... [nimib] 22 nbCode: ggplot(df, a... [nimib] 23 nbImage: [nimib] 24 nbText: -> ... [nimib] 25 nbCode: ggplot(df, a... [nimib] 26 nbImage: [nimib] 27 nbText: -> Nice, first ... [nimib] 28 nbCode: ggplot(df, a... [nimib] 29 nbImage: [nimib] 30 nbText: -> But wait. Wh... [nimib] 31 nbCode: ggplot(df, a... [nimib] 32 nbImage: [nimib] 33 nbText: -> Perfect, now... [nimib] 34 nbCode: ggplot(df, a... [nimib] 35 nbImage: [nimib] 36 nbText: -> ... [nimib] 37 nbCode: ggplot(df, a... [nimib] 38 nbImage: [nimib] 39 nbText: -> Much better.... [nimib] 40 nbCode: ggplot(df, a... [nimib] 41 nbImage: [nimib] 42 nbText: -> Sweet! But w... [nimib] 43 nbCode: ggplot(df, a... [nimib] 44 nbImage: [nimib] 45 nbText: -> Perfect! Let... [nimib] 46 nbCode: ggplot(df, a... [nimib] 47 nbImage: [nimib] 48 nbText: -> ... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: data_viz/plotting_data.html [nimibook] build entry: external_language_integration/index.md [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] thisFile: /home/ol/getting-started/book/external_language_integration/index.md [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: external_language_integration/index.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> This section... [nimib] current directory: /home/ol/getting-started/docs [nimib] creating directory: external_language_integration [nimib] saving file: external_language_integration/index.html [nimibook] build entry: external_language_integration/nim_with_py.nim [Executing] nim r book/external_language_integration/nim_with_py.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.016s; 10.758MiB peakmem; proj: /home/ol/getting-started/book/external_language_integration/nim_with_py.nim; out: /home/ol/.cache/nim/nim_with_py_d/nim_with_py_E13539246694A2360011E67EC38A9E707B6C43CB [SuccessX] Hint: /home/ol/.cache/nim/nim_with_py_d/nim_with_py_E13539246694A2360011E67EC38A9E707B6C43CB [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: external_language_integration/nim_with_py.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> # Using Pyth... [nimib] 1 nbCode: import nimpy... [nimib] 2 nbText: -> That's bas... [nimib] 3 nbCode: discard call... [nimib] 4 nbText: -> Most type ... [nimib] 5 nbFile: [nimib] 6 nbText: -> Now, onto ... [nimib] 7 nbCode: type... -> PyObject... [nimib] 8 nbText: -> As you can... [nimib] 9 nbCode: let nimValue... -> MyObj... [nimib] 10 nbText: -> Note that ... [nimib] 11 nbCode: import array... -> Now let's ... [nimib] 13 nbCode: let interp =... [nimib] 14 nbText: -> The result... [nimib] 15 nbCode: # The result... -> 15.0... [nimib] 16 nbText: -> As expecte... [nimib] 17 nbCode: var new_poin... -> Tensor[syste... [nimib] 18 nbText: -> The result... [nimib] 19 nbText: -> And that's... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: external_language_integration/nim_with_py.html [nimibook] build entry: external_language_integration/julia/basics.nim [Executing] nim r book/external_language_integration/julia/basics.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] ......................................................................................................................................................................................................... Nimjl> /home/ol/julia/usr stack trace: (most recent call last) /home/ol/.nimble/pkgs/nimjl-0.7.6/nimjl/config.nim(30, 48) /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) parseInt /home/ol/getting-started/book/external_language_integration/julia/basics.nim(31, 1) template/generic instantiation of `nbCode` from here /home/ol/.nimble/pkgs/nimib-#head/nimib.nim(74, 18) template/generic instantiation of `captureStdout` from here /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) Error: unhandled exception: invalid integer: 0-DEV [ValueError] [nimibook.error] error while processing external_language_integration/julia/basics.nim [nimibook] build entry: external_language_integration/julia/nimjl_conversions.nim [Executing] nim r book/external_language_integration/julia/nimjl_conversions.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] ......................................................................................................................................................................................................... Nimjl> /home/ol/julia/usr stack trace: (most recent call last) /home/ol/.nimble/pkgs/nimjl-0.7.6/nimjl/config.nim(30, 48) /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) parseInt /home/ol/getting-started/book/external_language_integration/julia/nimjl_conversions.nim(14, 1) template/generic instantiation of `nbCode` from here /home/ol/.nimble/pkgs/nimib-#head/nimib.nim(74, 18) template/generic instantiation of `captureStdout` from here /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) Error: unhandled exception: invalid integer: 0-DEV [ValueError] [nimibook.error] error while processing external_language_integration/julia/nimjl_conversions.nim [nimibook] build entry: external_language_integration/julia/nimjl_arrays.nim [Executing] nim r book/external_language_integration/julia/nimjl_arrays.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] ......................................................................................................................................................................................................... Nimjl> /home/ol/julia/usr stack trace: (most recent call last) /home/ol/.nimble/pkgs/nimjl-0.7.6/nimjl/config.nim(30, 48) /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) parseInt /home/ol/getting-started/book/external_language_integration/julia/nimjl_arrays.nim(28, 1) template/generic instantiation of `nbCode` from here /home/ol/.nimble/pkgs/nimib-#head/nimib.nim(74, 18) template/generic instantiation of `captureStdout` from here /home/ol/.choosenim/toolchains/nim-1.6.14/lib/pure/strutils.nim(1073, 5) Error: unhandled exception: invalid integer: 0-DEV [ValueError] [nimibook.error] error while processing external_language_integration/julia/nimjl_arrays.nim [nimibook] build entry: external_language_integration/nim_with_R.nim [Executing] nim r book/external_language_integration/nim_with_R.nim Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/nim.cfg' [Conf] Hint: used config file '/home/ol/.choosenim/toolchains/nim-1.6.14/config/config.nims' [Conf] Hint: gc: refc; opt: none (DEBUG BUILD, `-d:release` generates faster code) 9938 lines; 0.012s; 10.754MiB peakmem; proj: /home/ol/getting-started/book/external_language_integration/nim_with_R.nim; out: /home/ol/.cache/nim/nim_with_R_d/nim_with_R_2114360E245697691F1E16248AF87F20A38C881D [SuccessX] Hint: /home/ol/.cache/nim/nim_with_R_d/nim_with_R_2114360E245697691F1E16248AF87F20A38C881D [Exec] [nimib] config file found: /home/ol/getting-started/nimib.toml [nimib] srcDir: /home/ol/getting-started/book [nimib] filename: external_language_integration/nim_with_R.html [nimib] setting current directory to nb.homeDir: /home/ol/getting-started/docs [nimib] 0 nbText: -> This section... [nimib] current directory: /home/ol/getting-started/docs [nimib] saving file: external_language_integration/nim_with_R.html [nimibook.error] 7 build errors: ❌ numerical_methods/curve_fitting.nim ❌ numerical_methods/ode.nim ❌ numerical_methods/optimization.nim ❌ numerical_methods/interpolation.nim ❌ external_language_integration/julia/basics.nim ❌ external_language_integration/julia/nimjl_conversions.nim ❌ external_language_integration/julia/nimjl_arrays.nim stack trace: (most recent call last) /tmp/nimblecache-646829/nimscriptapi_2609712831.nim(187, 16) /home/ol/getting-started/scinim_getting_started.nimble(28, 7) genbookTask /home/ol/.choosenim/toolchains/nim-1.6.14/lib/system/nimscript.nim(273, 7) exec /home/ol/.choosenim/toolchains/nim-1.6.14/lib/system/nimscript.nim(273, 7) Error: unhandled exception: FAILED: ./bin/getting_started build [OSError] Tip: 1 messages have been suppressed, use --verbose to show them. Error: Exception raised during nimble script execution