Skip to content

Commit

Permalink
DOC: Update the Docker version
Browse files Browse the repository at this point in the history
  • Loading branch information
jonperdomo committed Oct 22, 2022
1 parent 7119591 commit 4776f39
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -23,14 +23,14 @@ First, install [Docker](https://docs.docker.com/engine/install/).
Pull the latest image from Docker hub:

```
docker pull genomicslab/longreadsum:v0.0.1
docker pull genomicslab/longreadsum
```

## Running

On Unix/Linux:
```
docker run -v local/inputs/:/inputs/ -it genomicslab/longreadsum:v0.0.1 bam -i /inputs/input.bam
docker run -v local/inputs/:/inputs/ -it genomicslab/longreadsum bam -i /inputs/input.bam
```
Note that the `-v` command is required for Docker to find the input file. In the above BAM file example, the local directory `local/inputs/` containing the input file is mapped to a directory `/inputs/` in the Docker container. Thus, the input file is specified as `/inputs/input.bam`

Expand Down

0 comments on commit 4776f39

Please sign in to comment.