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Releases: WGLab/LongReadSum

v1.4.0

27 Sep 19:38
4a610e4
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  • Add POD5 support
  • Add support for BAM files with base modifications
  • Add TIN score support for RNASeq files
  • Add RRMS BAM file support
  • VBZ plugin is included in the conda environment
  • Fix errors with guppy and dorado FAST5 files
  • Fix read length histogram bin labels
  • Update the README documentation

v1.3.1

09 Oct 14:00
c197d94
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  • Add RRMS support by generating QC for both accepted and rejected reads given the CSV with this information.
  • Fix base quality histogram integer overflow error with large integers
  • Add option to plot specific read IDs for FAST5 signal QC
  • Add BAM files with base modifications and RNASeq data to the Sample Data for unit tests

v1.3.0

01 Jun 18:48
9512541
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  • Reduce dependencies.
  • All plots are in dynamic HTML.
  • Fix fastq file, NM tag, and log file errors

v1.2.0

08 May 21:02
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Fix memory leaks in the bam file threading implementation.
Reformat the package for bioconda submission.

v1.0.1

10 Feb 22:05
6bb5af5
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Add FAST5 VBZ compression support
Update HTML report styles

v1.0.0

22 Oct 20:07
4776f39
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Refactored the project structure.
Implemented automated build and unit testing.
Added support for FAST5 files.
Added a FAST5 signal data QC option.
Added a Docker installation option.
Fix N50 implementations for FASTQ, BAM, and seqtxt files.

v0.1.0

03 Jun 20:30
4fc0286
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Initial release with sample input data for testing