Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

how can I download /humandb/hg19_ALL.sites.2014_10.txt file througth ANNOVAR #255

Open
nanu4github opened this issue Sep 24, 2024 · 1 comment

Comments

@nanu4github
Copy link

Thanks for your useful tools! There is a error which occurred when I running table_annovar.pl. And I will be really grateful if you tell me how to download this file, cause I try but it failed. error goes like:
Error: the required database file /Data_MJY/hhl/software/annovar/humandb/hg19_ALL.sites.2014_10.txt does not exist.
my code to download:
annotate_variation.pl -buildver hg19 -downdb -webfrom annovar ALL.sites.2014_10 humandb/
download error:
NOTICE: Web-based checking to see whether ANNOVAR new version is available ... Done NOTICE: Downloading annotation database /annovar/download/hg19_ALL.sites.2014_10.txt.gz ... Failed NOTICE: Downloading annotation database /annovar/download/hg19_ALL.sites.2014_10.txt.idx.gz ... Failed WARNING: Some files cannot be downloaded, including /download/hg19_ALL.sites.2014_10.txt.idx.gz, /download/hg19_ALL.sites.2014_10.txt.gz

@kaichop
Copy link
Contributor

kaichop commented Sep 24, 2024 via email

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants