diff --git a/worlds/pokemon_emerald/__init__.py b/worlds/pokemon_emerald/__init__.py
index 65bcce3a3296..c7f060a72969 100644
--- a/worlds/pokemon_emerald/__init__.py
+++ b/worlds/pokemon_emerald/__init__.py
@@ -569,14 +569,6 @@ def generate_output(self, output_directory: str) -> None:
         self.modified_misc_pokemon = copy.deepcopy(emerald_data.misc_pokemon)
         self.modified_starters = copy.deepcopy(emerald_data.starters)
 
-        randomize_abilities(self)
-        randomize_learnsets(self)
-        randomize_tm_hm_compatibility(self)
-        randomize_legendary_encounters(self)
-        randomize_misc_pokemon(self)
-        randomize_opponent_parties(self)
-        randomize_starters(self)
-
         # Modify catch rate
         min_catch_rate = min(self.options.min_catch_rate.value, 255)
         for species in self.modified_species.values():
@@ -591,6 +583,14 @@ def generate_output(self, output_directory: str) -> None:
                 new_moves.add(new_move)
                 self.modified_tmhm_moves[i] = new_move
 
+        randomize_abilities(self)
+        randomize_learnsets(self)
+        randomize_tm_hm_compatibility(self)
+        randomize_legendary_encounters(self)
+        randomize_misc_pokemon(self)
+        randomize_opponent_parties(self)
+        randomize_starters(self)
+
         create_patch(self, output_directory)
 
         del self.modified_trainers
diff --git a/worlds/pokemon_emerald/opponents.py b/worlds/pokemon_emerald/opponents.py
index f485282515a1..09e947546d7c 100644
--- a/worlds/pokemon_emerald/opponents.py
+++ b/worlds/pokemon_emerald/opponents.py
@@ -80,7 +80,7 @@ def randomize_opponent_parties(world: "PokemonEmeraldWorld") -> None:
                 per_species_tmhm_moves[new_species.species_id] = sorted({
                     world.modified_tmhm_moves[i]
                     for i, is_compatible in enumerate(int_to_bool_array(new_species.tm_hm_compatibility))
-                    if is_compatible
+                    if is_compatible and world.modified_tmhm_moves[i] not in world.blacklisted_moves
                 })
 
             # TMs and HMs compatible with the species