diff --git a/environment.yml b/environment.yml index af417cf36c..85b0d42889 100644 --- a/environment.yml +++ b/environment.yml @@ -17,7 +17,6 @@ dependencies: - click~=7.1 - disk-objectstore~=0.5 - django~=2.2 -- ete3~=3.1 - python-graphviz~=0.13 - ipython~=7.20 - jinja2~=2.10 @@ -29,7 +28,7 @@ dependencies: - plumpy~=0.19.0 - pgsu~=0.2.0 - psutil~=5.6 -- psycopg2>=2.8.3,~=2.8 +- psycopg2-binary>=2.8.3,~=2.8 - python-dateutil~=2.8 - pytz~=2019.3 - pyyaml~=5.1.2 diff --git a/requirements/requirements-py-3.7.txt b/requirements/requirements-py-3.7.txt index 47e74c7b6a..529b3d55a9 100644 --- a/requirements/requirements-py-3.7.txt +++ b/requirements/requirements-py-3.7.txt @@ -33,7 +33,6 @@ disk-objectstore~=0.5 Django==2.2.20 docutils==0.15.2 entrypoints==0.3 -ete3==3.1.2 Flask==1.1.2 Flask-Cors==3.0.10 Flask-RESTful==0.3.8 diff --git a/requirements/requirements-py-3.8.txt b/requirements/requirements-py-3.8.txt index 13124baabb..9f7766bb9d 100644 --- a/requirements/requirements-py-3.8.txt +++ b/requirements/requirements-py-3.8.txt @@ -33,7 +33,6 @@ disk-objectstore~=0.5 Django==2.2.20 docutils==0.15.2 entrypoints==0.3 -ete3==3.1.2 Flask==1.1.2 Flask-Cors==3.0.10 Flask-RESTful==0.3.8 diff --git a/requirements/requirements-py-3.9.txt b/requirements/requirements-py-3.9.txt index 1b47473b2f..4c63beb229 100644 --- a/requirements/requirements-py-3.9.txt +++ b/requirements/requirements-py-3.9.txt @@ -33,7 +33,6 @@ disk-objectstore~=0.5 Django==2.2.20 docutils==0.15.2 entrypoints==0.3 -ete3==3.1.2 Flask==1.1.2 Flask-Cors==3.0.10 Flask-RESTful==0.3.8 diff --git a/setup.json b/setup.json index f4dab7c0b9..8d09d75531 100644 --- a/setup.json +++ b/setup.json @@ -31,7 +31,6 @@ "click~=7.1", "disk-objectstore~=0.5", "django~=2.2", - "ete3~=3.1", "graphviz~=0.13", "ipython~=7.20", "jinja2~=2.10", diff --git a/utils/dependency_management.py b/utils/dependency_management.py index cc4848966a..33e96c74b7 100755 --- a/utils/dependency_management.py +++ b/utils/dependency_management.py @@ -26,7 +26,6 @@ ROOT = Path(__file__).resolve().parent.parent # repository root SETUPTOOLS_CONDA_MAPPINGS = { - 'psycopg2-binary': 'psycopg2', 'graphviz': 'python-graphviz', }