From ec84f2ad9146692fbcfe4f229c7171772821ee70 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Andr=C3=A9=20Pedersen?= Date: Wed, 8 Mar 2023 08:12:22 +0100 Subject: [PATCH] refactored README --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 9eb39f8..4df170e 100644 --- a/README.md +++ b/README.md @@ -48,14 +48,14 @@ cd dsa/ docker build -t fastpathology . ``` -To add the plugin to DSA, choose `Upload new Task` under Slicer CLI Web Tasks in the DSA web UI. The plugin can then be used from the Analysis Page. +To add the plugin to DSA, choose `Upload new Task` under `Slicer CLI Web Tasks` in the DSA web UI. The plugin can then be used from the Analysis Page. ## 👏 Acknowledgements The core was built based on [pyFAST](https://github.com/smistad/FAST), and the plugin was inspired by the plugins made for [MONAILabel](https://github.com/Project-MONAI/MONAILabel/tree/main/plugins/dsa) and [HistomicsTK](https://github.com/DigitalSlideArchive/HistomicsTK/tree/master/histomicstk/cli). Conversion of pyFAST's pyramidal TIFF annotations to HistomicsTK's JSON annotations was enabled using [OpenCV](https://github.com/opencv/opencv). -The plugin was made for the [Digital Slide Archive](https://github.com/DigitalSlideArchive/digital_slide_archive) which have developed an open and extremely robust and user-friendly archive web solution for large microscopy images. Building our methods on top of DSA was done with ease and credit to the developers such as [manthey](https://github.com/manthey) and [dgutman](https://github.com/dgutman) for addressing any issue and concerns we had at impressive speed! +The plugin was made for the [Digital Slide Archive](https://github.com/DigitalSlideArchive/digital_slide_archive) which has developed an open and extremely robust and user-friendly web solution for archiving, visualizing, processing, and annotating large microscopy images. Building our methods on top of DSA was done with ease and credit to the developers such as [manthey](https://github.com/manthey) and [dgutman](https://github.com/dgutman) for addressing any issue and concerns we had at impressive speed! ## ✨ License