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The criteria for masking a residue is described in the ProteinNet paper. If it's missing something let me know but I think it's complete. The code itself is in Mathematica, so I'm not sure how helpful it would be, but happy to share if it is.
Hi Mohammed,
Thanks for this great resource and congratulations on its recent publication. I'm curious - can you share your method for generating mask records?
Best,
Jonathan
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