Hanging on graph load

[rlorigro]

Hi, I downloaded your AppImage release v0.9.5 and tried loading a human assembly graph generated by verkko (the current state of the art for contiguity/completeness) and it created this malformed UI element and has been running like this for about 10min without finishing

The static executable from conventional bandage has successfully loaded this graph in a minute or so.

[asl]

Can you provide the input file? Likely GFA parser complains and this is why it is slow (currently we do not have good way to show these errors yet)

[rlorigro]

I have an update: the htop output for the app looks like this:

And the ui element has fixed itself:

It's been running with full CPU for about 25min

[rlorigro]

I'm not sure if I can share it. I'll ask the creators.

[asl]

n/m I managed to find this file elsewhere ;)

[asl]

The current workaround is to replace "utig-" with "utig_" until we will implement some tweaks in the GFA parser

[asl]

Fix included in https://github.com/asl/Bandage/releases/tag/v0.9.5.1