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DESCRIPTION
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DESCRIPTION
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Package: afterQIIME
Type: Package
Title: Convenience Functions for Standard Figures Expected in 16S Publications
Version: 0.0.1
Authors@R: c(person("Aubrey", "Bailey", email = "AubreyBailey@gmail.com",
role = c("aut", "cre")),
person("Kyle", "Bittinger", email = "kylebittinger@gmail.com",
role = c("aut")))
Description: Shortens common tasks associated with a 16S investigation to one-liners.
Included are alpha-diversity (observed-species, single-rarefaction) boxplots,
beta-diversity (PCoA) ordination and Adonis (PERMANOVA) testing,
taxon grouping and Kruskal-Wallis testing.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
URL: https://github.com/aubreybailey/afterQIIME
BugReports: https://github.com/aubreybailey/afterQIIME/issues
RdMacros: Rdpack
RoxygenNote: 6.1.0
Imports:
stats,
vegan,
ggplot2,
ape,
qiimer,
reshape2,
dplyr,
fossil,
Rdpack
Suggests:
devtools,
roxygen2,
testthat,
knitr,
rmarkdown
VignetteBuilder: knitr