diff --git a/README.Rmd b/README.Rmd index d0ee2b4..fcd1e42 100644 --- a/README.Rmd +++ b/README.Rmd @@ -37,7 +37,7 @@ The package pulls data from the [B.C. Data Catalogue EMS Results](https://catalo The package is not available on CRAN, but can be installed using the [devtools](https://github.com/hadley/devtools) package: -```{r} +```{r, message=FALSE, results=FALSE} # install.packages("devtools") # if not already installed library(devtools) diff --git a/README.md b/README.md index 34ba26a..8914086 100644 --- a/README.md +++ b/README.md @@ -37,11 +37,7 @@ The package is not available on CRAN, but can be installed using the # install.packages("devtools") # if not already installed library(devtools) -#> Loading required package: usethis install_github("bcgov/rems") -#> Using github PAT from envvar GITHUB_PAT -#> Skipping install of 'rems' from a github remote, the SHA1 (c41bbdc9) has not changed since last install. -#> Use `force = TRUE` to force installation ``` If you are asked during installation *“Would you like to install from @@ -188,12 +184,12 @@ head(all_data) #> # A tibble: 6 × 24 #> EMS_ID REQUISITION_ID MONITORING_LOCATION LATITUDE LONGITUDE LOCATION_TYPE #> -#> 1 0121580 50092680 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… -#> 2 0121580 50105403 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… -#> 3 0121580 08184843 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… -#> 4 0121580 08184771 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… -#> 5 0126400 08188795 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… -#> 6 0126400 08214498 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… +#> 1 0126400 08195503 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… +#> 2 0126400 08308654 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… +#> 3 0126400 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… +#> 4 0121580 08170541 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… +#> 5 0126400 08120854 QUINSAM RIVER AT THE … 50.0 -125. RIVER,STREAM… +#> 6 0121580 08189653 ENGLISHMAN RIVER AT P… 49.3 -124. RIVER,STREAM… #> # ℹ 18 more variables: COLLECTION_START , LOCATION_PURPOSE , #> # PERMIT , SAMPLE_CLASS , SAMPLE_STATE , #> # SAMPLE_DESCRIPTOR , PARAMETER_CODE , PARAMETER , @@ -218,12 +214,12 @@ filter(all_data, UNIT != MDL_UNIT) %>% #> # A tibble: 6 × 4 #> RESULT UNIT METHOD_DETECTION_LIMIT MDL_UNIT #> -#> 1 0.00004 mg/L 0.01 ug/L -#> 2 0.00079 mg/L 0.05 ug/L -#> 3 0.0384 mg/L 0.2 ug/L -#> 4 0.00094 mg/L 0.02 ug/L -#> 5 0.00083 mg/L 0.05 ug/L -#> 6 0.0947 mg/L 0.2 ug/L +#> 1 0.00113 mg/L 0.02 ug/L +#> 2 0.00036 mg/L 0.05 ug/L +#> 3 0.00142 mg/L 0.02 ug/L +#> 4 0.897 mg/L 0.2 ug/L +#> 5 0.19 mg/L 0.2 ug/L +#> 6 0.00068 mg/L 0.05 ug/L all_data <- standardize_mdl_units(all_data) #> Successfully converted units in 2172 rows.