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Releases: bcgsc/qupath-annotation-exchange

0.1.1

11 Jun 21:22
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0.1.1 Pre-release
Pre-release

This release includes a AnnotationExchangeExtension.jar build as of commit 4e15e3a.

Note that this release of AnnotationExchangeExtension.jar is only compatible with v0.1.2 of QuPath.

The .jar build of QuPath v0.1.2 used to create this AnnotationExchangeExtension.jar has also been included, should a developer wish to make modifications to 4e15e3a and then re-build AnnotationExchangeExtension.jar, without going through the hassle of making QuPath.jar.

Instructions on how to build QuPath.jar and AnnotationExchangeExtension.jar from scratch can be found in the branch docs/building-the-extension

0.1.0-alpha

13 Dec 18:38
9c17268
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0.1.0-alpha Pre-release
Pre-release

This release is meant for the limited users who will be downloading the annotations made in the internal GSC annotation application, and loading the annotations into QuPath.

Requirements

QuPath 0.1.2

As of this writing, iterations of QuPath 0.2.0 have been released as milestone releases, but the source code for this extension has not yet been updated to be compatible with QuPath 0.2.0.

We intend to support QuPath 0.2.0 in a future release.

How to Install

Download AnnotationExchangeExtension-0.1.0.jar and drag the file into the QuPath window:

install_extension

How to Use

Exporting Annotations

Exporting Annotations requires users to select the annotations from the Annotations tab:

export_annotations

Importing Annotations

import_annotations

Known Issues

  • Colour metadata of an annotation is not exported unless explicitly changed in the Set Properties window

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