Add --local option to Bismark Bowtie2 Wrapper (continuation from PR #1537, part 2)#1545

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jonasbucherETH wants to merge 9 commits intobgruening:masterfrom jonasbucherETH:add-local

+3,904-475

Commits on Oct 31, 2024

update requirement versions; handle lint warnings
jooner14
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Commits on Nov 15, 2024

Commits on Nov 16, 2024