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bigbio · Sep 4, 2023 · 6264521 · 6264521
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commit 6264521
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Showing 2 changed files with 2 additions and 4 deletions.
diff --git a/sdrf_pipelines/openms/unimod.py b/sdrf_pipelines/openms/unimod.py
@@ -123,7 +123,6 @@ def _get_modifications(self, node):
             mod = PostTranslationalModification(ontology_term, ma["delta_composition"], sites, ma["delta_mono_mass"])
             self.modifications.append(mod)
 
-
     def get_by_accession(self, accession):
         for mod in self.modifications:
             if mod.get_accession() == accession:

diff --git a/sdrf_pipelines/tests/test_unimod.py b/sdrf_pipelines/tests/test_unimod.py
@@ -6,14 +6,13 @@ def test_search_mods_by_keyword():
     ptm = unimod.get_by_accession("UNIMOD:21")
     print(ptm.get_name())
 
+
 def test_search_mods_by_keyword():
     unimod = UnimodDatabase()
     ptms = unimod.search_mods_by_keyword("Phospho")
     for ptm in ptms:
         print(ptm.to_str())
 
+
 if __name__ == "__main__":
     test_search_mods_by_keyword()
-
-
-