From 8f30775dce1422ef2c5cb81a143befdd270fe250 Mon Sep 17 00:00:00 2001
From: Alyssa Morrow <akmorrow@berkeley.edu>
Date: Mon, 12 Nov 2018 11:59:06 -0800
Subject: [PATCH] replaceSamples and replaceSequences methods override

---
 .../org/bdgenomics/adam/rdd/feature/FeatureRDD.scala      | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala b/adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
index afbb7e395c..6dce3b15d1 100644
--- a/adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
+++ b/adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
@@ -329,7 +329,7 @@ case class DatasetBoundFeatureRDD private[rdd] (
    * @param newSequences The new sequence dictionary to attach.
    * @return Returns a new DatasetBoundFeatureRDD with the sequences replaced.
    */
-  def replaceSequences(newSequences: SequenceDictionary): FeatureRDD = {
+  override def replaceSequences(newSequences: SequenceDictionary): FeatureRDD = {
     copy(sequences = newSequences)
   }
 
@@ -339,7 +339,7 @@ case class DatasetBoundFeatureRDD private[rdd] (
    * @param newSamples The new sample metadata to attach.
    * @return A DatasetBoundFeatureRDD with new sample metadata.
    */
-  def replaceSamples(newSamples: Iterable[Sample]): FeatureRDD = {
+  override def replaceSamples(newSamples: Iterable[Sample]): FeatureRDD = {
     copy(samples = newSamples.toSeq)
   }
 
@@ -421,7 +421,7 @@ case class RDDBoundFeatureRDD private[rdd] (
    * @param newSequences The new sequence dictionary to attach.
    * @return Returns a new RDDBoundFeatureRDD with the sequences replaced.
    */
-  def replaceSequences(newSequences: SequenceDictionary): FeatureRDD = {
+  override def replaceSequences(newSequences: SequenceDictionary): FeatureRDD = {
     copy(sequences = newSequences)
   }
 
@@ -431,7 +431,7 @@ case class RDDBoundFeatureRDD private[rdd] (
    * @param newSamples The new sample metadata to attach.
    * @return A RDDBoundFeatureRDD with new sample metadata.
    */
-  def replaceSamples(newSamples: Iterable[Sample]): FeatureRDD = {
+  override def replaceSamples(newSamples: Iterable[Sample]): FeatureRDD = {
     copy(samples = newSamples.toSeq)
   }