From 65b45bdc5c9dd197c32c5ed98668c639b4c3e0b8 Mon Sep 17 00:00:00 2001 From: Manuel Holtgrewe Date: Thu, 5 Jan 2023 11:09:45 +0100 Subject: [PATCH] fix: do not expect md5 sums for make_vcf step of melt (#323) --- snappy_pipeline/workflows/common/melt.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/snappy_pipeline/workflows/common/melt.py b/snappy_pipeline/workflows/common/melt.py index 7364c4726..c5256df7e 100644 --- a/snappy_pipeline/workflows/common/melt.py +++ b/snappy_pipeline/workflows/common/melt.py @@ -207,9 +207,7 @@ def _get_output_files_make_vcf(self): yield "list_txt", f"work/{infix}/out/list.txt" yield "done", touch(f"work/{infix}/out/.done") yield "vcf", f"work/{infix}/out/{infix}.final_comp.vcf.gz" - yield "vcf_md5", f"work/{infix}/out/{infix}.final_comp.vcf.gz.md5" yield "vcf_tbi", f"work/{infix}/out/{infix}.final_comp.vcf.gz.tbi" - yield "vcf_tbi_md5", f"work/{infix}/out/{infix}.final_comp.vcf.gz.tbi.md5" @dictify def _get_input_files_merge_vcf(self, wildcards):