From 131f2e80d559c7612927b77970704931626c39f6 Mon Sep 17 00:00:00 2001
From: Luan Nguyen <125411678+luan-n-nguyen@users.noreply.github.com>
Date: Mon, 4 Nov 2024 16:58:34 +1100
Subject: [PATCH] Use openjdk 11 for hmftools-redux and update hmftools-sage
 jar (#51831)

---
 recipes/hmftools-esvee/meta.yaml | 2 +-
 recipes/hmftools-redux/meta.yaml | 4 ++--
 recipes/hmftools-sage/meta.yaml  | 8 ++++----
 3 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/recipes/hmftools-esvee/meta.yaml b/recipes/hmftools-esvee/meta.yaml
index 227fec34dfdcd..18f76aad8eedf 100644
--- a/recipes/hmftools-esvee/meta.yaml
+++ b/recipes/hmftools-esvee/meta.yaml
@@ -12,7 +12,7 @@ source:
 
 build:
   noarch: generic
-  number: 3
+  number: 4
   run_exports:
     - {{ pin_subpackage("hmftools-esvee", max_pin="x.x") }}
 
diff --git a/recipes/hmftools-redux/meta.yaml b/recipes/hmftools-redux/meta.yaml
index 187be4d48df27..613a037c626d9 100644
--- a/recipes/hmftools-redux/meta.yaml
+++ b/recipes/hmftools-redux/meta.yaml
@@ -12,13 +12,13 @@ source:
 
 build:
   noarch: generic
-  number: 2
+  number: 3
   run_exports:
     - {{ pin_subpackage('hmftools-redux', max_pin="x.x") }}
 
 requirements:
   run:
-    - openjdk >=8
+    - openjdk >=8,<=17
     - sambamba >=1.0.1
 
 test:
diff --git a/recipes/hmftools-sage/meta.yaml b/recipes/hmftools-sage/meta.yaml
index 2fe25f493e0a8..13d88d9de1259 100644
--- a/recipes/hmftools-sage/meta.yaml
+++ b/recipes/hmftools-sage/meta.yaml
@@ -1,6 +1,6 @@
 {% set version = "4.0_beta" %}
-{% set beta_suffix = ".2" %}
-{% set sha256 = "371908a6311f6fc1f43fc450118c1cae19e2966beb4dd5e2586f3db69e0f6d4a" %}
+{% set beta_suffix = ".3" %}
+{% set sha256 = "6675b28bd271ab12cd6881abccc3b0b309f5faa1544f31d3c3ec762f219ead7f" %}
 
 package:
   name: hmftools-sage
@@ -12,14 +12,14 @@ source:
 
 build:
   noarch: generic
-  number: 2
+  number: 3
   run_exports:
     - {{ pin_subpackage('hmftools-sage', max_pin="x") }}
 
 requirements:
   run:
     - zlib
-    - openjdk >=8
+    - openjdk >=9
     - bioconductor-variantannotation
     - bioconductor-genomicranges
     - r-dplyr