From 27386f4ade5e7d869551b360b94c6082cbe10e61 Mon Sep 17 00:00:00 2001 From: Akintunde Emiola Date: Mon, 22 Oct 2018 11:58:37 -0400 Subject: [PATCH] update grid --- recipes/grid/build.sh | 2 +- recipes/grid/meta.yaml | 9 +++++---- 2 files changed, 6 insertions(+), 5 deletions(-) diff --git a/recipes/grid/build.sh b/recipes/grid/build.sh index 22d1e0eea23c6..be86c349b3d4d 100644 --- a/recipes/grid/build.sh +++ b/recipes/grid/build.sh @@ -7,7 +7,7 @@ mkdir -p $PREFIX/bin cd $SRC_DIR -cp grid GRiD*.R README.md update_database bowtie.txt check_R_libraries.R $outdir +cp grid GRiD*.R README.md update_database check_R_libraries.R $outdir cp -R blast_database $outdir chmod +x $outdir/grid $outdir/update_database ln -s $outdir/grid $PREFIX/bin/grid diff --git a/recipes/grid/meta.yaml b/recipes/grid/meta.yaml index 8989bbc07e6d8..805c47be3cab4 100644 --- a/recipes/grid/meta.yaml +++ b/recipes/grid/meta.yaml @@ -1,23 +1,24 @@ package: name: grid - version: "1.0.6" + version: "1.1" source: - url: https://github.com/ohlab/GRiD/archive/1.0.6.tar.gz - sha256: 8a4f55124375b797189551ccebb4d28fa01d2d51316ce372ba9c3beab94736ae + url: https://github.com/ohlab/GRiD/archive/1.1.tar.gz + sha256: 069ce4453dbb59fa69dd6e887964b5fa61cdf3fe75b18b298c3c8f08eebf82a2 build: noarch: generic requirements: run: + - parallel - pathoscope - r-dplyr - r-ggplot2 - r-gplots - r-getopt - r-gsubfn - - samtools=0.1.19 + - samtools - bamtools - bowtie2 - seqtk