From d9d2a806dd226d84f8b049640428b006771d2e1f Mon Sep 17 00:00:00 2001 From: David Seifert Date: Wed, 24 Oct 2018 08:06:21 -0700 Subject: [PATCH] PacBio: Update minimum pbcore version * We want all users of PacBio tools to be able to use our utilities with pbmm2 alignments. --- recipes/genomicconsensus/meta.yaml | 6 +++--- recipes/pbalign/meta.yaml | 4 ++-- recipes/pbcoretools/meta.yaml | 6 +++--- 3 files changed, 8 insertions(+), 8 deletions(-) diff --git a/recipes/genomicconsensus/meta.yaml b/recipes/genomicconsensus/meta.yaml index 51946456d34e2..aeaf0964be524 100644 --- a/recipes/genomicconsensus/meta.yaml +++ b/recipes/genomicconsensus/meta.yaml @@ -22,21 +22,21 @@ extra: build: skip: True # [not py27 or osx] - number: 2 + number: 3 requirements: host: - python - setuptools - numpy >=1.15 - - pbcore >=1.5.1 + - pbcore >=1.6.5 - pbcommand >=1.1.1 - python-consensuscore >=1.1.1 - python-consensuscore2 >=3.1.0 run: - python - numpy >=1.15 - - pbcore >=1.5.1 + - pbcore >=1.6.5 - pbcommand >=1.1.1 - python-consensuscore >=1.1.1 - python-consensuscore2 >=3.1.0 diff --git a/recipes/pbalign/meta.yaml b/recipes/pbalign/meta.yaml index 1a7981dd3a808..5ef9b585a54c5 100644 --- a/recipes/pbalign/meta.yaml +++ b/recipes/pbalign/meta.yaml @@ -24,7 +24,7 @@ extra: build: skip: True # [not py27] - number: 0 + number: 1 requirements: host: @@ -33,7 +33,7 @@ requirements: run: - python - pysam >=0.13 - - pbcore >=1.5.1 + - pbcore >=1.6.5 - pbcommand >=1.1.1 - blasr >=5.3.2 - pbbam >=0.18.0 diff --git a/recipes/pbcoretools/meta.yaml b/recipes/pbcoretools/meta.yaml index 45c2d9613547a..5d9741b91748d 100644 --- a/recipes/pbcoretools/meta.yaml +++ b/recipes/pbcoretools/meta.yaml @@ -22,7 +22,7 @@ extra: build: skip: True # [not py27] - number: 2 + number: 3 requirements: host: @@ -31,13 +31,13 @@ requirements: - cython - numpy >=1.15 - pysam >=0.13 - - pbcore >=1.5.1 + - pbcore >=1.6.5 - pbcommand >=1.1.1 run: - python - numpy >=1.15 - pysam >=0.13 - - pbcore >=1.5.1 + - pbcore >=1.6.5 - pbcommand >=1.1.1 test: