From c5377fa58798c723bb9f8f670431699c7239b304 Mon Sep 17 00:00:00 2001 From: M Bernt Date: Sun, 1 Dec 2019 15:46:24 +0100 Subject: [PATCH 1/4] prinseq: bump build was forgotten here https://github.com/bioconda/bioconda-recipes/pull/9784 --- recipes/prinseq/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/recipes/prinseq/meta.yaml b/recipes/prinseq/meta.yaml index 16b51b13ea5a3..b5ed7b3f3dece 100644 --- a/recipes/prinseq/meta.yaml +++ b/recipes/prinseq/meta.yaml @@ -6,7 +6,7 @@ package: name: prinseq version: '0.20.4' build: - number: 3 + number: 4 skip: False source: md5: 3be1a572073ebbbecfeba42a42853ff5 From f02b260f4e1b9bffbe64d9a0c2023b158bb31679 Mon Sep 17 00:00:00 2001 From: dpryan79 Date: Mon, 2 Dec 2019 08:13:32 +0100 Subject: [PATCH 2/4] remove from blacklist --- build-fail-blacklist | 3 --- 1 file changed, 3 deletions(-) diff --git a/build-fail-blacklist b/build-fail-blacklist index 5e826518868fe..76cf071f18c70 100644 --- a/build-fail-blacklist +++ b/build-fail-blacklist @@ -403,9 +403,6 @@ recipes/bumbershoot # perl recipes/vcftools/0.1.10 -# perl wrong interpreter -recipes/prinseq - # checking whether the C compiler works... no recipes/fastme From 40277ce4a0e98bf3d854b8ce46123add95bfc4c5 Mon Sep 17 00:00:00 2001 From: Devon Ryan Date: Mon, 2 Dec 2019 08:22:47 +0100 Subject: [PATCH 3/4] Update meta.yaml --- recipes/prinseq/meta.yaml | 22 +++++++++++++++------- 1 file changed, 15 insertions(+), 7 deletions(-) diff --git a/recipes/prinseq/meta.yaml b/recipes/prinseq/meta.yaml index b5ed7b3f3dece..5027a6b4c53e1 100644 --- a/recipes/prinseq/meta.yaml +++ b/recipes/prinseq/meta.yaml @@ -1,19 +1,27 @@ -about: - home: 'http://prinseq.sourceforge.net/' - license: "GPLv3" - summary: "PRINSEQ can be used to filter, reformat, or trim your genomic and metagenomic sequence data" +{% set version = "0.20.4" %} + package: name: prinseq - version: '0.20.4' + version: {{ version }} + build: number: 4 - skip: False + noarch: generic + source: md5: 3be1a572073ebbbecfeba42a42853ff5 - url: http://iweb.dl.sourceforge.net/project/prinseq/standalone/prinseq-lite-0.20.4.tar.gz + url: http://iweb.dl.sourceforge.net/project/prinseq/standalone/prinseq-lite-{{ version }}.tar.gz + requirements: run: - perl # [not osx] + test: commands: - prinseq-lite.pl -version + +about: + home: 'http://prinseq.sourceforge.net/' + license: "GPLv3" + license_file: COPYING + summary: "PRINSEQ can be used to filter, reformat, or trim your genomic and metagenomic sequence data" From 292a28512e83bdffd961061eef1920c5655179bd Mon Sep 17 00:00:00 2001 From: Devon Ryan Date: Mon, 2 Dec 2019 08:40:03 +0100 Subject: [PATCH 4/4] Update meta.yaml --- recipes/prinseq/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/recipes/prinseq/meta.yaml b/recipes/prinseq/meta.yaml index 5027a6b4c53e1..aefe7050fc1b2 100644 --- a/recipes/prinseq/meta.yaml +++ b/recipes/prinseq/meta.yaml @@ -14,7 +14,7 @@ source: requirements: run: - - perl # [not osx] + - perl test: commands: