From df23d64f228c72bafd0396bdb0420ab1c1546de1 Mon Sep 17 00:00:00 2001
From: JW <34543031+jwcodee@users.noreply.github.com>
Date: Thu, 3 Oct 2024 08:50:38 -0700
Subject: [PATCH 1/5] Update meta.yaml with new dependencies

---
 recipes/goldrush/meta.yaml | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/recipes/goldrush/meta.yaml b/recipes/goldrush/meta.yaml
index d922f93a62226..daaa2b92b9286 100644
--- a/recipes/goldrush/meta.yaml
+++ b/recipes/goldrush/meta.yaml
@@ -1,5 +1,5 @@
 {% set name = "goldrush" %}
-{% set version = "1.1.2" %}
+{% set version = "1.2.o" %}
 
 package:
   name: {{ name|lower }}
@@ -30,6 +30,7 @@ requirements:
     - libdivsufsort
     - sparsehash
     - btllib >=1.6.2
+    - intervaltree
   run:
     - make
     - python
@@ -39,6 +40,7 @@ requirements:
     - minimap2
     - gperftools
     - bc
+    - snakemake
 
 test:
   commands:

From 4a3162a4bcf090a7df0b2bcaa5013a348ae89563 Mon Sep 17 00:00:00 2001
From: JW <34543031+jwcodee@users.noreply.github.com>
Date: Thu, 3 Oct 2024 08:53:06 -0700
Subject: [PATCH 2/5] Update meta.yaml

---
 recipes/goldrush/meta.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/recipes/goldrush/meta.yaml b/recipes/goldrush/meta.yaml
index daaa2b92b9286..ba58712deca72 100644
--- a/recipes/goldrush/meta.yaml
+++ b/recipes/goldrush/meta.yaml
@@ -1,5 +1,5 @@
 {% set name = "goldrush" %}
-{% set version = "1.2.o" %}
+{% set version = "1.2.0" %}
 
 package:
   name: {{ name|lower }}

From a56dcaf46d851bec1bf4fc10e9fd66fcbd926d34 Mon Sep 17 00:00:00 2001
From: JW <34543031+jwcodee@users.noreply.github.com>
Date: Thu, 3 Oct 2024 09:15:41 -0700
Subject: [PATCH 3/5] meta.yaml: fix suffix of tarball

---
 recipes/goldrush/meta.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/recipes/goldrush/meta.yaml b/recipes/goldrush/meta.yaml
index ba58712deca72..12af6fcc93363 100644
--- a/recipes/goldrush/meta.yaml
+++ b/recipes/goldrush/meta.yaml
@@ -6,7 +6,7 @@ package:
   version: {{ version }}
 
 source:
-  url: https://github.com/bcgsc/goldrush/releases/download/{{ version }}/{{ name|lower }}-{{ version }}.tar.xz
+  url: https://github.com/bcgsc/goldrush/releases/download/{{ version }}/{{ name|lower }}-{{ version }}.tar.gz
   sha256: a502a90f1d3a0039fb6c00485f9de64f6f25b4f92ecdf8f977e7f3cf106e948f
 
 build:

From b7cb1151e0f2987c606321f606b6de0d5e69239d Mon Sep 17 00:00:00 2001
From: Martin Grigorov <martin-g@users.noreply.github.com>
Date: Fri, 4 Oct 2024 14:22:28 +0300
Subject: [PATCH 4/5] Update SHA

---
 recipes/goldrush/meta.yaml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/recipes/goldrush/meta.yaml b/recipes/goldrush/meta.yaml
index 12af6fcc93363..700d13ada9445 100644
--- a/recipes/goldrush/meta.yaml
+++ b/recipes/goldrush/meta.yaml
@@ -7,7 +7,7 @@ package:
 
 source:
   url: https://github.com/bcgsc/goldrush/releases/download/{{ version }}/{{ name|lower }}-{{ version }}.tar.gz
-  sha256: a502a90f1d3a0039fb6c00485f9de64f6f25b4f92ecdf8f977e7f3cf106e948f
+  sha256: 3f70860ed92b9313dbab16efed65ea7bc6080d78b4e18afc8cb910e086a7f0f7
 
 build:
   skip: true  # [py < 38 or win or py > 39]

From 13cee00ad28975bcac4ea29c4e4474dbf4e3a6a7 Mon Sep 17 00:00:00 2001
From: Martin Grigorov <martin-g@users.noreply.github.com>
Date: Fri, 4 Oct 2024 14:23:26 +0300
Subject: [PATCH 5/5] Move build tools to `build` requirements

---
 recipes/goldrush/meta.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/recipes/goldrush/meta.yaml b/recipes/goldrush/meta.yaml
index 700d13ada9445..f9a23e06eccd6 100644
--- a/recipes/goldrush/meta.yaml
+++ b/recipes/goldrush/meta.yaml
@@ -17,11 +17,11 @@ build:
 requirements:
   build:
     - {{ compiler('cxx') }}
-  host:
-    - python
     - meson
     - ninja
     - cmake
+  host:
+    - python
     - llvm-openmp  # [osx]
     - libgomp      # [linux]
     - gperftools