From 275514061b2d29ccc3726958610a9585d412edbb Mon Sep 17 00:00:00 2001
From: Anthony Fullam <anthony.fullam@embl.de>
Date: Fri, 11 Oct 2024 13:02:43 +0200
Subject: [PATCH 1/4] Add meta_eukaryome_detect

---
 recipes/meta_eukaryome_detect/meta.yml | 47 ++++++++++++++++++++++++++
 1 file changed, 47 insertions(+)
 create mode 100644 recipes/meta_eukaryome_detect/meta.yml

diff --git a/recipes/meta_eukaryome_detect/meta.yml b/recipes/meta_eukaryome_detect/meta.yml
new file mode 100644
index 0000000000000..56686b5f98641
--- /dev/null
+++ b/recipes/meta_eukaryome_detect/meta.yml
@@ -0,0 +1,47 @@
+{% set name = "meta_eukaryome_detect" %}
+{% set version = "0.1.0" %}
+
+package:
+  name: "{{ name|lower }}"
+  version: "{{ version }}"
+
+source:
+  url: "https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
+  sha256: 3dfd5d8e8ef89babd00ca9800859dd496389dfedb5bdf4fa64b272526de69cca
+
+build:
+  number: 0
+  entry_points:
+    - meta-eukaryome-detect = meta_eukaryome_detect.meta_eukaryome_detect:main
+  script: "{{ PYTHON }} -m pip install . -vv --ignore-installed --no-deps"
+  noarch: python
+
+requirements:
+  host:
+    - pip
+    - python >=3.11
+  run:
+    - ngless
+    - samtools
+    - pandas >= 2.0.
+    - requests
+
+test:
+  imports:
+    - meta-eukaryome-detect
+  commands:
+    - meta-eukaryome-detect --help
+
+about:
+  home: "https://github.com/grp-bork/meta_eukaryome_detect"
+  license: "MIT License"
+  license_family: MIT
+  license_file: LICENSE
+  summary: "Pathogen, Parasite, Eukaryote and Virus detection in metagenomes."
+  doc_url: "https://grp-bork.embl-community.io/grp-microbiome-astrology/meta_eukaryome_detect/"
+  dev_url: "https://github.com/grp-bork/meta_eukaryome_detect"
+
+extra:
+  recipe-maintainers:
+    - fullama
+

From 7899ce8755720f739f7ef9d0d01bdd9ad115958e Mon Sep 17 00:00:00 2001
From: Anthony Fullam <anthony.fullam@embl.de>
Date: Fri, 11 Oct 2024 13:19:38 +0200
Subject: [PATCH 2/4] Update recipe

---
 recipes/meta_eukaryome_detect/meta.yml | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/recipes/meta_eukaryome_detect/meta.yml b/recipes/meta_eukaryome_detect/meta.yml
index 56686b5f98641..b84f3ed6a1b8a 100644
--- a/recipes/meta_eukaryome_detect/meta.yml
+++ b/recipes/meta_eukaryome_detect/meta.yml
@@ -15,7 +15,9 @@ build:
     - meta-eukaryome-detect = meta_eukaryome_detect.meta_eukaryome_detect:main
   script: "{{ PYTHON }} -m pip install . -vv --ignore-installed --no-deps"
   noarch: python
-
+  run_exports:
+    {{ pin_subpackage(name, max_pin="x") }}
+    
 requirements:
   host:
     - pip
@@ -28,9 +30,9 @@ requirements:
 
 test:
   imports:
-    - meta-eukaryome-detect
+    - meta_eukaryome_detect
   commands:
-    - meta-eukaryome-detect --help
+    - meta_eukaryome_detect --help
 
 about:
   home: "https://github.com/grp-bork/meta_eukaryome_detect"
@@ -44,4 +46,3 @@ about:
 extra:
   recipe-maintainers:
     - fullama
-

From ac54235e4c769150ae8fefa25d4061b8559349f2 Mon Sep 17 00:00:00 2001
From: Anthony Fullam <anthony.fullam@embl.de>
Date: Fri, 11 Oct 2024 13:46:00 +0200
Subject: [PATCH 3/4] Standardise tool naming

---
 recipes/meta_eukaryome_detect/meta.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/recipes/meta_eukaryome_detect/meta.yml b/recipes/meta_eukaryome_detect/meta.yml
index b84f3ed6a1b8a..07a654810abea 100644
--- a/recipes/meta_eukaryome_detect/meta.yml
+++ b/recipes/meta_eukaryome_detect/meta.yml
@@ -1,5 +1,5 @@
 {% set name = "meta_eukaryome_detect" %}
-{% set version = "0.1.0" %}
+{% set version = "0.1.1" %}
 
 package:
   name: "{{ name|lower }}"
@@ -7,12 +7,12 @@ package:
 
 source:
   url: "https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
-  sha256: 3dfd5d8e8ef89babd00ca9800859dd496389dfedb5bdf4fa64b272526de69cca
+  sha256: 0199ad179d36d3683b8122f41b1e5db6c5d7d94324c3fe5187d576fafdfa2cdc
 
 build:
   number: 0
   entry_points:
-    - meta-eukaryome-detect = meta_eukaryome_detect.meta_eukaryome_detect:main
+    - meta_eukaryome_detect = meta_eukaryome_detect.meta_eukaryome_detect:main
   script: "{{ PYTHON }} -m pip install . -vv --ignore-installed --no-deps"
   noarch: python
   run_exports:

From b6cb4a17ca747c14700dc4d0ace6ac3d501237cb Mon Sep 17 00:00:00 2001
From: Anthony Fullam <fullama@users.noreply.github.com>
Date: Fri, 11 Oct 2024 14:10:44 +0200
Subject: [PATCH 4/4] Update recipes/meta_eukaryome_detect/meta.yml

Co-authored-by: coderabbitai[bot] <136622811+coderabbitai[bot]@users.noreply.github.com>
---
 recipes/meta_eukaryome_detect/meta.yml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/recipes/meta_eukaryome_detect/meta.yml b/recipes/meta_eukaryome_detect/meta.yml
index 07a654810abea..e5a65c5575be3 100644
--- a/recipes/meta_eukaryome_detect/meta.yml
+++ b/recipes/meta_eukaryome_detect/meta.yml
@@ -25,9 +25,8 @@ requirements:
   run:
     - ngless
     - samtools
-    - pandas >= 2.0.
+    - pandas >= 2.0
     - requests
-
 test:
   imports:
     - meta_eukaryome_detect