577@dataclass 578class RecordBase(RemoteBase, ABC): -579 """Base class for a `RemoteDraft` and `RemoteVersion`""" +579 """Base class for a `RecordDraft` and `Record`""" 580 581 concept_id: str 582 concept: RecordConcept = field(init=False) @@ -2956,10 +2956,17 @@Inherited Members
656 return [ 657 f"{self.folder}files/{p}" for p in self.client.ls(f"{self.folder}files/") 658 ] +659 +660 def get_compatibility_report_path(self, tool: str): +661 return f"{self.folder}compatibility/{tool}.json" +662 +663 def set_compatibility_report(self, report: CompatiblityReport) -> None: +664 path = self.get_compatibility_report_path(report.tool) +665 self.client.put_and_cache(path, report.model_dump_json().encode())
Base class for a RemoteDraft and RemoteVersion
Base class for a RecordDraft and Record
661@dataclass -662class RecordDraft(RecordBase): -663 """A staged resource version""" -664 -665 version: ClassVar[str] = "draft" -666 doi: ClassVar[None] = None -667 -668 @property -669 def folder(self) -> str: -670 """The S3 (sub)prefix of this version -671 (**sub**)prefix, because the client may prefix this prefix""" -672 return f"{self.id}/" -673 -674 @property -675 def id(self) -> str: -676 return f"{self.concept_id}/draft" -677 -678 @property -679 def info(self) -> DraftInfo: -680 return self._get_json(DraftInfo) -681 -682 def update_info(self, update: DraftInfo): -683 self._update_json(update) +@@ -3628,11 +3674,11 @@668@dataclass +669class RecordDraft(RecordBase): +670 """A staged resource version""" +671 +672 version: ClassVar[str] = "draft" +673 doi: ClassVar[None] = None +674 +675 @property +676 def folder(self) -> str: +677 """The S3 (sub)prefix of this version +678 (**sub**)prefix, because the client may prefix this prefix""" +679 return f"{self.id}/" +680 +681 @property +682 def id(self) -> str: +683 return f"{self.concept_id}/draft" 684 685 @property -686 def bioimageio_url(self): -687 return f"https://bioimage.io/#/?repo={self.collection.client.get_file_url('collection_draft.json')}&id={self.concept_id}" +686 def info(self) -> DraftInfo: +687 return self._get_json(DraftInfo) 688 -689 @property -690 def concept_doi(self): -691 """concept DOI of Zenodo record""" -692 return self.concept.doi -693 -694 @log -695 @lock_concept -696 def unpack(self, package_url: str): -697 previous_versions = self.concept.get_published_versions() -698 if not previous_versions: -699 previous_rdf = None -700 else: -701 previous_rdf = previous_versions[0].get_rdf() -702 -703 # ensure we have a chat.json -704 self.extend_chat(Chat()) -705 -706 self.add_log_entry( -707 LogEntry( -708 message="new status: unpacking", -709 details={"package_url": package_url}, -710 ) -711 ) +689 def update_info(self, update: DraftInfo): +690 self._update_json(update) +691 +692 @property +693 def bioimageio_url(self): +694 return f"https://bioimage.io/#/?repo={self.collection.client.get_file_url('collection_draft.json')}&id={self.concept_id}" +695 +696 @property +697 def concept_doi(self): +698 """concept DOI of Zenodo record""" +699 return self.concept.doi +700 +701 @log +702 @lock_concept +703 def unpack(self, package_url: str): +704 previous_versions = self.concept.get_published_versions() +705 if not previous_versions: +706 previous_rdf = None +707 else: +708 previous_rdf = previous_versions[0].get_rdf() +709 +710 # ensure we have a chat.json +711 self.extend_chat(Chat()) 712 -713 # Download the model zip file -714 try: -715 remotezip = urllib.request.urlopen(package_url) -716 except Exception as e: -717 raise RuntimeError(f"failed to open {package_url}: {e}") -718 -719 zipinmemory = io.BytesIO(remotezip.read()) -720 -721 # Unzip the zip file -722 zipobj = zipfile.ZipFile(zipinmemory) -723 -724 file_names = set(zipobj.namelist()) -725 bioimageio_yaml_file_name = identify_bioimageio_yaml_file_name(file_names) -726 -727 rdf: Union[Any, Dict[Any, Any]] = yaml.load( -728 zipobj.open(bioimageio_yaml_file_name).read().decode() -729 ) -730 if not isinstance(rdf, dict): -731 raise ValueError( -732 f"Expected {bioimageio_yaml_file_name} to hold a dictionary" -733 ) -734 -735 if (rdf_id := rdf.get("id")) is None: -736 rdf["id"] = self.concept_id -737 elif rdf_id != self.concept_id: +713 self.add_log_entry( +714 LogEntry( +715 message="new status: unpacking", +716 details={"package_url": package_url}, +717 ) +718 ) +719 +720 # Download the model zip file +721 try: +722 remotezip = urllib.request.urlopen(package_url) +723 except Exception as e: +724 raise RuntimeError(f"failed to open {package_url}: {e}") +725 +726 zipinmemory = io.BytesIO(remotezip.read()) +727 +728 # Unzip the zip file +729 zipobj = zipfile.ZipFile(zipinmemory) +730 +731 file_names = set(zipobj.namelist()) +732 bioimageio_yaml_file_name = identify_bioimageio_yaml_file_name(file_names) +733 +734 rdf: Union[Any, Dict[Any, Any]] = yaml.load( +735 zipobj.open(bioimageio_yaml_file_name).read().decode() +736 ) +737 if not isinstance(rdf, dict): 738 raise ValueError( -739 f"Expected package for {self.concept_id}, " -740 + f"but found id {rdf_id} in {package_url}" -741 ) -742 -743 if "name" not in rdf: -744 raise ValueError(f"Missing 'name' in {package_url}") -745 -746 self._set_status( -747 UnpackingStatus(description=f"unzipping {package_url} to {self.folder}") -748 ) +739 f"Expected {bioimageio_yaml_file_name} to hold a dictionary" +740 ) +741 +742 if (rdf_id := rdf.get("id")) is None: +743 rdf["id"] = self.concept_id +744 elif rdf_id != self.concept_id: +745 raise ValueError( +746 f"Expected package for {self.concept_id}, " +747 + f"but found id {rdf_id} in {package_url}" +748 ) 749 -750 collection_data = self.client.load_file("collection.json") -751 assert collection_data is not None -752 collection = json.loads(collection_data) -753 for e in collection["collection"]: -754 if e["name"] == rdf["name"]: -755 if e["id"] != rdf["id"]: -756 self.add_log_entry( -757 LogEntry( -758 message=f"error: Another resource with name='{rdf['name']}' already exists ({e['id']})" -759 ) -760 ) -761 break -762 -763 # set matching id_emoji -764 rdf["id_emoji"] = self.collection.config.id_parts.get_icon(self.id) -765 if rdf["id_emoji"] is None: -766 self.add_log_entry( -767 LogEntry(message=f"error: Failed to get icon for {self.id}") -768 ) +750 if "name" not in rdf: +751 raise ValueError(f"Missing 'name' in {package_url}") +752 +753 self._set_status( +754 UnpackingStatus(description=f"unzipping {package_url} to {self.folder}") +755 ) +756 +757 collection_data = self.client.load_file("collection.json") +758 assert collection_data is not None +759 collection = json.loads(collection_data) +760 for e in collection["collection"]: +761 if e["name"] == rdf["name"]: +762 if e["id"] != rdf["id"]: +763 self.add_log_entry( +764 LogEntry( +765 message=f"error: Another resource with name='{rdf['name']}' already exists ({e['id']})" +766 ) +767 ) +768 break 769 -770 if "id" not in rdf: -771 raise ValueError("Missing `id` field") -772 -773 if not str(rdf["id"]): -774 raise ValueError(f"Invalid `id`: {rdf['id']}") -775 -776 if "uploader" not in rdf: -777 for r in self.collection.config.reviewers: -778 if settings.bioimageio_user_id == r.id: -779 rdf["uploader"] = dict(name=r.name, email=r.email) -780 break -781 else: -782 raise ValueError("RDF is missing `uploader.email` field.") -783 -784 elif not isinstance(rdf["uploader"], dict) or "email" not in rdf["uploader"]: -785 raise ValueError("RDF is missing `uploader.email` field.") -786 elif not isinstance(rdf["uploader"]["email"], str): -787 raise ValueError("RDF has invalid `uploader.email` field.") -788 -789 uploader: Any = rdf["uploader"]["email"] -790 if previous_rdf is not None: -791 prev_authors: List[Dict[str, str]] = previous_rdf["authors"] -792 assert isinstance(prev_authors, list) -793 prev_maintainers: List[Dict[str, str]] = ( -794 previous_rdf.get("maintainers", []) + prev_authors -795 ) -796 maintainer_emails = [a["email"] for a in prev_maintainers if "email" in a] -797 if ( -798 uploader != previous_rdf.get("uploader", {}).get("email", BOT_EMAIL) -799 and uploader not in maintainer_emails -800 and uploader not in [r.email for r in self.collection.config.reviewers] -801 ): -802 raise ValueError( -803 f"uploader '{uploader}' is not a maintainer of '{self.id}' nor a registered bioimageio reviewer." -804 ) -805 -806 # clean up any previous draft files -807 self.client.rm_dir(self.folder + "files/") -808 -809 # upload new draft files -810 def upload(file_name: str, file_data: bytes): -811 path = f"{self.folder}files/{file_name}" -812 self.client.put(path, io.BytesIO(file_data), length=len(file_data)) -813 -814 thumbnails = create_thumbnails(rdf, zipobj) -815 config = rdf.setdefault("config", {}) -816 if isinstance(config, dict): -817 bioimageio_config: Any = config.setdefault("bioimageio", {}) -818 if isinstance(bioimageio_config, dict): -819 thumbnail_config: Any = bioimageio_config.setdefault("thumbnails", {}) -820 if isinstance(thumbnail_config, dict): -821 for oname, (tname, tdata) in thumbnails.items(): -822 upload(tname, tdata) -823 thumbnail_config[oname] = tname -824 -825 rdf_io = io.BytesIO() -826 yaml.dump(rdf, rdf_io) -827 rdf_data = rdf_io.getvalue() -828 upload("rdf.yaml", rdf_data) -829 -830 file_names.remove(bioimageio_yaml_file_name) -831 for other in {fn for fn in file_names if is_valid_bioimageio_yaml_name(fn)}: -832 logger.warning("ignoring alternative rdf.yaml source '{other}'") -833 file_names.remove(other) -834 -835 for file_name in file_names: -836 file_data = zipobj.open(file_name).read() -837 upload(file_name, file_data) -838 -839 self._set_status(UnpackedStatus()) -840 -841 def set_testing_status(self, description: str): -842 self._set_status(TestingStatus(description=description)) -843 -844 def await_review(self): -845 """set status to 'awaiting review'""" -846 self._set_status(AwaitingReviewStatus()) +770 # set matching id_emoji +771 rdf["id_emoji"] = self.collection.config.id_parts.get_icon(self.id) +772 if rdf["id_emoji"] is None: +773 self.add_log_entry( +774 LogEntry(message=f"error: Failed to get icon for {self.id}") +775 ) +776 +777 if "id" not in rdf: +778 raise ValueError("Missing `id` field") +779 +780 if not str(rdf["id"]): +781 raise ValueError(f"Invalid `id`: {rdf['id']}") +782 +783 if "uploader" not in rdf: +784 for r in self.collection.config.reviewers: +785 if settings.bioimageio_user_id == r.id: +786 rdf["uploader"] = dict(name=r.name, email=r.email) +787 break +788 else: +789 raise ValueError("RDF is missing `uploader.email` field.") +790 +791 elif not isinstance(rdf["uploader"], dict) or "email" not in rdf["uploader"]: +792 raise ValueError("RDF is missing `uploader.email` field.") +793 elif not isinstance(rdf["uploader"]["email"], str): +794 raise ValueError("RDF has invalid `uploader.email` field.") +795 +796 uploader: Any = rdf["uploader"]["email"] +797 if previous_rdf is not None: +798 prev_authors: List[Dict[str, str]] = previous_rdf["authors"] +799 assert isinstance(prev_authors, list) +800 prev_maintainers: List[Dict[str, str]] = ( +801 previous_rdf.get("maintainers", []) + prev_authors +802 ) +803 maintainer_emails = [a["email"] for a in prev_maintainers if "email" in a] +804 if ( +805 uploader != previous_rdf.get("uploader", {}).get("email", BOT_EMAIL) +806 and uploader not in maintainer_emails +807 and uploader not in [r.email for r in self.collection.config.reviewers] +808 ): +809 raise ValueError( +810 f"uploader '{uploader}' is not a maintainer of '{self.id}' nor a registered bioimageio reviewer." +811 ) +812 +813 # clean up any previous draft files +814 self.client.rm_dir(self.folder + "files/") +815 +816 # upload new draft files +817 def upload(file_name: str, file_data: bytes): +818 path = f"{self.folder}files/{file_name}" +819 self.client.put(path, io.BytesIO(file_data), length=len(file_data)) +820 +821 thumbnails = create_thumbnails(rdf, zipobj) +822 config = rdf.setdefault("config", {}) +823 if isinstance(config, dict): +824 bioimageio_config: Any = config.setdefault("bioimageio", {}) +825 if isinstance(bioimageio_config, dict): +826 thumbnail_config: Any = bioimageio_config.setdefault("thumbnails", {}) +827 if isinstance(thumbnail_config, dict): +828 for oname, (tname, tdata) in thumbnails.items(): +829 upload(tname, tdata) +830 thumbnail_config[oname] = tname +831 +832 rdf_io = io.BytesIO() +833 yaml.dump(rdf, rdf_io) +834 rdf_data = rdf_io.getvalue() +835 upload("rdf.yaml", rdf_data) +836 +837 file_names.remove(bioimageio_yaml_file_name) +838 for other in {fn for fn in file_names if is_valid_bioimageio_yaml_name(fn)}: +839 logger.warning("ignoring alternative rdf.yaml source '{other}'") +840 file_names.remove(other) +841 +842 for file_name in file_names: +843 file_data = zipobj.open(file_name).read() +844 upload(file_name, file_data) +845 +846 self._set_status(UnpackedStatus()) 847 -848 @reviewer_role -849 def request_changes(self, reviewer: str, reason: str): -850 # map reviewer id to name -851 for r in self.collection.config.reviewers: -852 if reviewer == r.id: -853 reviewer = r.name -854 break -855 -856 self._set_status(ChangesRequestedStatus(description=reason)) -857 self.extend_chat( -858 Chat( -859 messages=[ -860 Message( -861 author="system", text=f"{reviewer} requested changes: {reason}" -862 ) -863 ] -864 ) -865 ) -866 -867 @log -868 @reviewer_role -869 @lock_concept -870 def publish(self, reviewer: str) -> Record: -871 """mark this staged version candidate as accepted and try to publish it""" -872 # map reviewer id to name -873 for r in self.collection.config.reviewers: -874 if reviewer == r.id: -875 reviewer = r.name -876 break -877 -878 self._set_status(AcceptedStatus()) -879 self.extend_chat( -880 Chat( -881 messages=[ -882 Message( -883 author="system", -884 text=f"{reviewer} accepted {self.id} {self.version}", -885 ) -886 ] -887 ) -888 ) -889 -890 logger.debug("Publishing {}", self.folder) -891 -892 rdf_data = self.client.load_file(self.rdf_path) -893 if rdf_data is None: -894 raise RuntimeError(f"Failed to load staged RDF from {self.rdf_path}") -895 -896 rdf: Union[Any, Dict[Any, Any]] = yaml.load(io.BytesIO(rdf_data)) -897 assert isinstance(rdf, dict) -898 version = rdf.get("version", "1") -899 if not isinstance(version, (int, float, str)): -900 raise ValueError(f"Invalid `version`: '{version}'") -901 else: -902 version = str(version) -903 if version in {v.version for v in self.concept.get_published_versions()}: -904 raise ValueError(f"Trying to publish version '{version}' again!") -905 -906 published = Record( -907 client=self.client, concept_id=self.concept_id, version=version -908 ) -909 -910 # move all files -911 self.client.cp_dir(self.folder, published.folder) +848 def set_testing_status(self, description: str): +849 self._set_status(TestingStatus(description=description)) +850 +851 def await_review(self): +852 """set status to 'awaiting review'""" +853 self._set_status(AwaitingReviewStatus()) +854 +855 @reviewer_role +856 def request_changes(self, reviewer: str, reason: str): +857 # map reviewer id to name +858 for r in self.collection.config.reviewers: +859 if reviewer == r.id: +860 reviewer = r.name +861 break +862 +863 self._set_status(ChangesRequestedStatus(description=reason)) +864 self.extend_chat( +865 Chat( +866 messages=[ +867 Message( +868 author="system", text=f"{reviewer} requested changes: {reason}" +869 ) +870 ] +871 ) +872 ) +873 +874 @log +875 @reviewer_role +876 @lock_concept +877 def publish(self, reviewer: str) -> Record: +878 """mark this staged version candidate as accepted and try to publish it""" +879 # map reviewer id to name +880 for r in self.collection.config.reviewers: +881 if reviewer == r.id: +882 reviewer = r.name +883 break +884 +885 self._set_status(AcceptedStatus()) +886 self.extend_chat( +887 Chat( +888 messages=[ +889 Message( +890 author="system", +891 text=f"{reviewer} accepted {self.id} {self.version}", +892 ) +893 ] +894 ) +895 ) +896 +897 logger.debug("Publishing {}", self.folder) +898 +899 rdf_data = self.client.load_file(self.rdf_path) +900 if rdf_data is None: +901 raise RuntimeError(f"Failed to load staged RDF from {self.rdf_path}") +902 +903 rdf: Union[Any, Dict[Any, Any]] = yaml.load(io.BytesIO(rdf_data)) +904 assert isinstance(rdf, dict) +905 version = rdf.get("version", "1") +906 if not isinstance(version, (int, float, str)): +907 raise ValueError(f"Invalid `version`: '{version}'") +908 else: +909 version = str(version) +910 if version in {v.version for v in self.concept.get_published_versions()}: +911 raise ValueError(f"Trying to publish version '{version}' again!") 912 -913 # overwrite rdf.yaml with updated version_number -914 stream = io.StringIO() -915 yaml.dump(rdf, stream) -916 rdf_data = stream.getvalue().encode() -917 self.client.put(self.rdf_path, io.BytesIO(rdf_data), length=len(rdf_data)) -918 self.client.rm_dir(self.folder) +913 published = Record( +914 client=self.client, concept_id=self.concept_id, version=version +915 ) +916 +917 # move all files +918 self.client.cp_dir(self.folder, published.folder) 919 -920 published.update_info(RecordInfo()) -921 return published -922 -923 def _set_status(self, value: DraftStatus): -924 current_status = self.info.status -925 self.add_log_entry( -926 LogEntry(message=f"new status: {value.description}", details=value) -927 ) -928 if value.name == "testing" or current_status is None: -929 pass -930 elif value.step < current_status.step: -931 logger.warning("Proceeding from {} to {}", current_status, value) -932 -933 self._update_json(DraftInfo(status=value)) +920 # overwrite rdf.yaml with updated version_number +921 stream = io.StringIO() +922 yaml.dump(rdf, stream) +923 rdf_data = stream.getvalue().encode() +924 self.client.put(self.rdf_path, io.BytesIO(rdf_data), length=len(rdf_data)) +925 self.client.rm_dir(self.folder) +926 +927 published.update_info(RecordInfo()) +928 return published +929 +930 def _set_status(self, value: DraftStatus): +931 current_status = self.info.status +932 self.add_log_entry( +933 LogEntry(message=f"new status: {value.description}", details=value) +934 ) +935 if value.name == "testing" or current_status is None: +936 pass +937 elif value.step < current_status.step: +938 logger.warning("Proceeding from {} to {}", current_status, value) +939 +940 self._update_json(DraftInfo(status=value))Inherited Members
668 @property -669 def folder(self) -> str: -670 """The S3 (sub)prefix of this version -671 (**sub**)prefix, because the client may prefix this prefix""" -672 return f"{self.id}/" +@@ -3651,9 +3697,9 @@675 @property +676 def folder(self) -> str: +677 """The S3 (sub)prefix of this version +678 (**sub**)prefix, because the client may prefix this prefix""" +679 return f"{self.id}/"Inherited Members
674 @property -675 def id(self) -> str: -676 return f"{self.concept_id}/draft" + @@ -3669,9 +3715,9 @@Inherited Members
678 @property -679 def info(self) -> DraftInfo: -680 return self._get_json(DraftInfo) + @@ -3689,8 +3735,8 @@Inherited Members
682 def update_info(self, update: DraftInfo): -683 self._update_json(update) + @@ -3706,9 +3752,9 @@Inherited Members
685 @property -686 def bioimageio_url(self): -687 return f"https://bioimage.io/#/?repo={self.collection.client.get_file_url('collection_draft.json')}&id={self.concept_id}" +@@ -3724,10 +3770,10 @@692 @property +693 def bioimageio_url(self): +694 return f"https://bioimage.io/#/?repo={self.collection.client.get_file_url('collection_draft.json')}&id={self.concept_id}"Inherited Members
689 @property -690 def concept_doi(self): -691 """concept DOI of Zenodo record""" -692 return self.concept.doi +@@ -3749,152 +3795,152 @@696 @property +697 def concept_doi(self): +698 """concept DOI of Zenodo record""" +699 return self.concept.doiInherited Members
694 @log -695 @lock_concept -696 def unpack(self, package_url: str): -697 previous_versions = self.concept.get_published_versions() -698 if not previous_versions: -699 previous_rdf = None -700 else: -701 previous_rdf = previous_versions[0].get_rdf() -702 -703 # ensure we have a chat.json -704 self.extend_chat(Chat()) -705 -706 self.add_log_entry( -707 LogEntry( -708 message="new status: unpacking", -709 details={"package_url": package_url}, -710 ) -711 ) +@@ -3912,8 +3958,8 @@701 @log +702 @lock_concept +703 def unpack(self, package_url: str): +704 previous_versions = self.concept.get_published_versions() +705 if not previous_versions: +706 previous_rdf = None +707 else: +708 previous_rdf = previous_versions[0].get_rdf() +709 +710 # ensure we have a chat.json +711 self.extend_chat(Chat()) 712 -713 # Download the model zip file -714 try: -715 remotezip = urllib.request.urlopen(package_url) -716 except Exception as e: -717 raise RuntimeError(f"failed to open {package_url}: {e}") -718 -719 zipinmemory = io.BytesIO(remotezip.read()) -720 -721 # Unzip the zip file -722 zipobj = zipfile.ZipFile(zipinmemory) -723 -724 file_names = set(zipobj.namelist()) -725 bioimageio_yaml_file_name = identify_bioimageio_yaml_file_name(file_names) -726 -727 rdf: Union[Any, Dict[Any, Any]] = yaml.load( -728 zipobj.open(bioimageio_yaml_file_name).read().decode() -729 ) -730 if not isinstance(rdf, dict): -731 raise ValueError( -732 f"Expected {bioimageio_yaml_file_name} to hold a dictionary" -733 ) -734 -735 if (rdf_id := rdf.get("id")) is None: -736 rdf["id"] = self.concept_id -737 elif rdf_id != self.concept_id: +713 self.add_log_entry( +714 LogEntry( +715 message="new status: unpacking", +716 details={"package_url": package_url}, +717 ) +718 ) +719 +720 # Download the model zip file +721 try: +722 remotezip = urllib.request.urlopen(package_url) +723 except Exception as e: +724 raise RuntimeError(f"failed to open {package_url}: {e}") +725 +726 zipinmemory = io.BytesIO(remotezip.read()) +727 +728 # Unzip the zip file +729 zipobj = zipfile.ZipFile(zipinmemory) +730 +731 file_names = set(zipobj.namelist()) +732 bioimageio_yaml_file_name = identify_bioimageio_yaml_file_name(file_names) +733 +734 rdf: Union[Any, Dict[Any, Any]] = yaml.load( +735 zipobj.open(bioimageio_yaml_file_name).read().decode() +736 ) +737 if not isinstance(rdf, dict): 738 raise ValueError( -739 f"Expected package for {self.concept_id}, " -740 + f"but found id {rdf_id} in {package_url}" -741 ) -742 -743 if "name" not in rdf: -744 raise ValueError(f"Missing 'name' in {package_url}") -745 -746 self._set_status( -747 UnpackingStatus(description=f"unzipping {package_url} to {self.folder}") -748 ) +739 f"Expected {bioimageio_yaml_file_name} to hold a dictionary" +740 ) +741 +742 if (rdf_id := rdf.get("id")) is None: +743 rdf["id"] = self.concept_id +744 elif rdf_id != self.concept_id: +745 raise ValueError( +746 f"Expected package for {self.concept_id}, " +747 + f"but found id {rdf_id} in {package_url}" +748 ) 749 -750 collection_data = self.client.load_file("collection.json") -751 assert collection_data is not None -752 collection = json.loads(collection_data) -753 for e in collection["collection"]: -754 if e["name"] == rdf["name"]: -755 if e["id"] != rdf["id"]: -756 self.add_log_entry( -757 LogEntry( -758 message=f"error: Another resource with name='{rdf['name']}' already exists ({e['id']})" -759 ) -760 ) -761 break -762 -763 # set matching id_emoji -764 rdf["id_emoji"] = self.collection.config.id_parts.get_icon(self.id) -765 if rdf["id_emoji"] is None: -766 self.add_log_entry( -767 LogEntry(message=f"error: Failed to get icon for {self.id}") -768 ) +750 if "name" not in rdf: +751 raise ValueError(f"Missing 'name' in {package_url}") +752 +753 self._set_status( +754 UnpackingStatus(description=f"unzipping {package_url} to {self.folder}") +755 ) +756 +757 collection_data = self.client.load_file("collection.json") +758 assert collection_data is not None +759 collection = json.loads(collection_data) +760 for e in collection["collection"]: +761 if e["name"] == rdf["name"]: +762 if e["id"] != rdf["id"]: +763 self.add_log_entry( +764 LogEntry( +765 message=f"error: Another resource with name='{rdf['name']}' already exists ({e['id']})" +766 ) +767 ) +768 break 769 -770 if "id" not in rdf: -771 raise ValueError("Missing `id` field") -772 -773 if not str(rdf["id"]): -774 raise ValueError(f"Invalid `id`: {rdf['id']}") -775 -776 if "uploader" not in rdf: -777 for r in self.collection.config.reviewers: -778 if settings.bioimageio_user_id == r.id: -779 rdf["uploader"] = dict(name=r.name, email=r.email) -780 break -781 else: -782 raise ValueError("RDF is missing `uploader.email` field.") -783 -784 elif not isinstance(rdf["uploader"], dict) or "email" not in rdf["uploader"]: -785 raise ValueError("RDF is missing `uploader.email` field.") -786 elif not isinstance(rdf["uploader"]["email"], str): -787 raise ValueError("RDF has invalid `uploader.email` field.") -788 -789 uploader: Any = rdf["uploader"]["email"] -790 if previous_rdf is not None: -791 prev_authors: List[Dict[str, str]] = previous_rdf["authors"] -792 assert isinstance(prev_authors, list) -793 prev_maintainers: List[Dict[str, str]] = ( -794 previous_rdf.get("maintainers", []) + prev_authors -795 ) -796 maintainer_emails = [a["email"] for a in prev_maintainers if "email" in a] -797 if ( -798 uploader != previous_rdf.get("uploader", {}).get("email", BOT_EMAIL) -799 and uploader not in maintainer_emails -800 and uploader not in [r.email for r in self.collection.config.reviewers] -801 ): -802 raise ValueError( -803 f"uploader '{uploader}' is not a maintainer of '{self.id}' nor a registered bioimageio reviewer." -804 ) -805 -806 # clean up any previous draft files -807 self.client.rm_dir(self.folder + "files/") -808 -809 # upload new draft files -810 def upload(file_name: str, file_data: bytes): -811 path = f"{self.folder}files/{file_name}" -812 self.client.put(path, io.BytesIO(file_data), length=len(file_data)) -813 -814 thumbnails = create_thumbnails(rdf, zipobj) -815 config = rdf.setdefault("config", {}) -816 if isinstance(config, dict): -817 bioimageio_config: Any = config.setdefault("bioimageio", {}) -818 if isinstance(bioimageio_config, dict): -819 thumbnail_config: Any = bioimageio_config.setdefault("thumbnails", {}) -820 if isinstance(thumbnail_config, dict): -821 for oname, (tname, tdata) in thumbnails.items(): -822 upload(tname, tdata) -823 thumbnail_config[oname] = tname -824 -825 rdf_io = io.BytesIO() -826 yaml.dump(rdf, rdf_io) -827 rdf_data = rdf_io.getvalue() -828 upload("rdf.yaml", rdf_data) -829 -830 file_names.remove(bioimageio_yaml_file_name) -831 for other in {fn for fn in file_names if is_valid_bioimageio_yaml_name(fn)}: -832 logger.warning("ignoring alternative rdf.yaml source '{other}'") -833 file_names.remove(other) -834 -835 for file_name in file_names: -836 file_data = zipobj.open(file_name).read() -837 upload(file_name, file_data) -838 -839 self._set_status(UnpackedStatus()) +770 # set matching id_emoji +771 rdf["id_emoji"] = self.collection.config.id_parts.get_icon(self.id) +772 if rdf["id_emoji"] is None: +773 self.add_log_entry( +774 LogEntry(message=f"error: Failed to get icon for {self.id}") +775 ) +776 +777 if "id" not in rdf: +778 raise ValueError("Missing `id` field") +779 +780 if not str(rdf["id"]): +781 raise ValueError(f"Invalid `id`: {rdf['id']}") +782 +783 if "uploader" not in rdf: +784 for r in self.collection.config.reviewers: +785 if settings.bioimageio_user_id == r.id: +786 rdf["uploader"] = dict(name=r.name, email=r.email) +787 break +788 else: +789 raise ValueError("RDF is missing `uploader.email` field.") +790 +791 elif not isinstance(rdf["uploader"], dict) or "email" not in rdf["uploader"]: +792 raise ValueError("RDF is missing `uploader.email` field.") +793 elif not isinstance(rdf["uploader"]["email"], str): +794 raise ValueError("RDF has invalid `uploader.email` field.") +795 +796 uploader: Any = rdf["uploader"]["email"] +797 if previous_rdf is not None: +798 prev_authors: List[Dict[str, str]] = previous_rdf["authors"] +799 assert isinstance(prev_authors, list) +800 prev_maintainers: List[Dict[str, str]] = ( +801 previous_rdf.get("maintainers", []) + prev_authors +802 ) +803 maintainer_emails = [a["email"] for a in prev_maintainers if "email" in a] +804 if ( +805 uploader != previous_rdf.get("uploader", {}).get("email", BOT_EMAIL) +806 and uploader not in maintainer_emails +807 and uploader not in [r.email for r in self.collection.config.reviewers] +808 ): +809 raise ValueError( +810 f"uploader '{uploader}' is not a maintainer of '{self.id}' nor a registered bioimageio reviewer." +811 ) +812 +813 # clean up any previous draft files +814 self.client.rm_dir(self.folder + "files/") +815 +816 # upload new draft files +817 def upload(file_name: str, file_data: bytes): +818 path = f"{self.folder}files/{file_name}" +819 self.client.put(path, io.BytesIO(file_data), length=len(file_data)) +820 +821 thumbnails = create_thumbnails(rdf, zipobj) +822 config = rdf.setdefault("config", {}) +823 if isinstance(config, dict): +824 bioimageio_config: Any = config.setdefault("bioimageio", {}) +825 if isinstance(bioimageio_config, dict): +826 thumbnail_config: Any = bioimageio_config.setdefault("thumbnails", {}) +827 if isinstance(thumbnail_config, dict): +828 for oname, (tname, tdata) in thumbnails.items(): +829 upload(tname, tdata) +830 thumbnail_config[oname] = tname +831 +832 rdf_io = io.BytesIO() +833 yaml.dump(rdf, rdf_io) +834 rdf_data = rdf_io.getvalue() +835 upload("rdf.yaml", rdf_data) +836 +837 file_names.remove(bioimageio_yaml_file_name) +838 for other in {fn for fn in file_names if is_valid_bioimageio_yaml_name(fn)}: +839 logger.warning("ignoring alternative rdf.yaml source '{other}'") +840 file_names.remove(other) +841 +842 for file_name in file_names: +843 file_data = zipobj.open(file_name).read() +844 upload(file_name, file_data) +845 +846 self._set_status(UnpackedStatus())Inherited Members
841 def set_testing_status(self, description: str): -842 self._set_status(TestingStatus(description=description)) +@@ -3931,9 +3977,9 @@848 def set_testing_status(self, description: str): +849 self._set_status(TestingStatus(description=description))Inherited Members
844 def await_review(self): -845 """set status to 'awaiting review'""" -846 self._set_status(AwaitingReviewStatus()) +@@ -3954,24 +4000,24 @@851 def await_review(self): +852 """set status to 'awaiting review'""" +853 self._set_status(AwaitingReviewStatus())Inherited Members
848 @reviewer_role -849 def request_changes(self, reviewer: str, reason: str): -850 # map reviewer id to name -851 for r in self.collection.config.reviewers: -852 if reviewer == r.id: -853 reviewer = r.name -854 break -855 -856 self._set_status(ChangesRequestedStatus(description=reason)) -857 self.extend_chat( -858 Chat( -859 messages=[ -860 Message( -861 author="system", text=f"{reviewer} requested changes: {reason}" -862 ) -863 ] -864 ) -865 ) +@@ -3992,61 +4038,61 @@855 @reviewer_role +856 def request_changes(self, reviewer: str, reason: str): +857 # map reviewer id to name +858 for r in self.collection.config.reviewers: +859 if reviewer == r.id: +860 reviewer = r.name +861 break +862 +863 self._set_status(ChangesRequestedStatus(description=reason)) +864 self.extend_chat( +865 Chat( +866 messages=[ +867 Message( +868 author="system", text=f"{reviewer} requested changes: {reason}" +869 ) +870 ] +871 ) +872 )Inherited Members
867 @log -868 @reviewer_role -869 @lock_concept -870 def publish(self, reviewer: str) -> Record: -871 """mark this staged version candidate as accepted and try to publish it""" -872 # map reviewer id to name -873 for r in self.collection.config.reviewers: -874 if reviewer == r.id: -875 reviewer = r.name -876 break -877 -878 self._set_status(AcceptedStatus()) -879 self.extend_chat( -880 Chat( -881 messages=[ -882 Message( -883 author="system", -884 text=f"{reviewer} accepted {self.id} {self.version}", -885 ) -886 ] -887 ) -888 ) -889 -890 logger.debug("Publishing {}", self.folder) -891 -892 rdf_data = self.client.load_file(self.rdf_path) -893 if rdf_data is None: -894 raise RuntimeError(f"Failed to load staged RDF from {self.rdf_path}") -895 -896 rdf: Union[Any, Dict[Any, Any]] = yaml.load(io.BytesIO(rdf_data)) -897 assert isinstance(rdf, dict) -898 version = rdf.get("version", "1") -899 if not isinstance(version, (int, float, str)): -900 raise ValueError(f"Invalid `version`: '{version}'") -901 else: -902 version = str(version) -903 if version in {v.version for v in self.concept.get_published_versions()}: -904 raise ValueError(f"Trying to publish version '{version}' again!") -905 -906 published = Record( -907 client=self.client, concept_id=self.concept_id, version=version -908 ) -909 -910 # move all files -911 self.client.cp_dir(self.folder, published.folder) +@@ -4074,6 +4120,8 @@874 @log +875 @reviewer_role +876 @lock_concept +877 def publish(self, reviewer: str) -> Record: +878 """mark this staged version candidate as accepted and try to publish it""" +879 # map reviewer id to name +880 for r in self.collection.config.reviewers: +881 if reviewer == r.id: +882 reviewer = r.name +883 break +884 +885 self._set_status(AcceptedStatus()) +886 self.extend_chat( +887 Chat( +888 messages=[ +889 Message( +890 author="system", +891 text=f"{reviewer} accepted {self.id} {self.version}", +892 ) +893 ] +894 ) +895 ) +896 +897 logger.debug("Publishing {}", self.folder) +898 +899 rdf_data = self.client.load_file(self.rdf_path) +900 if rdf_data is None: +901 raise RuntimeError(f"Failed to load staged RDF from {self.rdf_path}") +902 +903 rdf: Union[Any, Dict[Any, Any]] = yaml.load(io.BytesIO(rdf_data)) +904 assert isinstance(rdf, dict) +905 version = rdf.get("version", "1") +906 if not isinstance(version, (int, float, str)): +907 raise ValueError(f"Invalid `version`: '{version}'") +908 else: +909 version = str(version) +910 if version in {v.version for v in self.concept.get_published_versions()}: +911 raise ValueError(f"Trying to publish version '{version}' again!") 912 -913 # overwrite rdf.yaml with updated version_number -914 stream = io.StringIO() -915 yaml.dump(rdf, stream) -916 rdf_data = stream.getvalue().encode() -917 self.client.put(self.rdf_path, io.BytesIO(rdf_data), length=len(rdf_data)) -918 self.client.rm_dir(self.folder) +913 published = Record( +914 client=self.client, concept_id=self.concept_id, version=version +915 ) +916 +917 # move all files +918 self.client.cp_dir(self.folder, published.folder) 919 -920 published.update_info(RecordInfo()) -921 return published +920 # overwrite rdf.yaml with updated version_number +921 stream = io.StringIO() +922 yaml.dump(rdf, stream) +923 rdf_data = stream.getvalue().encode() +924 self.client.put(self.rdf_path, io.BytesIO(rdf_data), length=len(rdf_data)) +925 self.client.rm_dir(self.folder) +926 +927 published.update_info(RecordInfo()) +928 return publishedInherited Members
get_file_url get_file_urls get_file_paths +get_compatibility_report_path +set_compatibility_report
936@dataclass - 937class Record(RecordBase): - 938 """A representation of a published resource version""" - 939 - 940 version: str - 941 """a (semantic) version string""" - 942 - 943 @property - 944 def id(self) -> str: - 945 return f"{self.concept_id}/{self.version}" +-943@dataclass + 944class Record(RecordBase): + 945 """A representation of a published resource version""" 946 - 947 @property - 948 def doi(self): - 949 """version specific DOI of Zenodo record""" - 950 return self.info.doi - 951 - 952 @property - 953 def concept_doi(self): - 954 """concept DOI of Zenodo record""" - 955 return self.info.concept_doi - 956 - 957 @property - 958 def bioimageio_url(self): - 959 return f"https://bioimage.io/#/?id={self.concept_id}" - 960 - 961 @property - 962 def info(self) -> RecordInfo: - 963 return self._get_json(RecordInfo) - 964 - 965 def update_info(self, update: RecordInfo): - 966 self._update_json(update) + 947 version: str + 948 """a (semantic) version string""" + 949 + 950 @property + 951 def id(self) -> str: + 952 return f"{self.concept_id}/{self.version}" + 953 + 954 @property + 955 def doi(self): + 956 """version specific DOI of Zenodo record""" + 957 return self.info.doi + 958 + 959 @property + 960 def concept_doi(self): + 961 """concept DOI of Zenodo record""" + 962 return self.info.concept_doi + 963 + 964 @property + 965 def bioimageio_url(self): + 966 return f"https://bioimage.io/#/?id={self.concept_id}" 967 - 968 def get_compatibility_report_path(self, tool: str): - 969 return f"{self.folder}compatibility/{tool}.json" - 970 - 971 def set_compatibility_report(self, report: CompatiblityReport) -> None: - 972 path = self.get_compatibility_report_path(report.tool) - 973 self.client.put_and_cache(path, report.model_dump_json().encode()) + 968 @property + 969 def info(self) -> RecordInfo: + 970 return self._get_json(RecordInfo) + 971 + 972 def update_info(self, update: RecordInfo): + 973 self._update_json(update) 974 975 def get_all_compatibility_reports(self, tool: Optional[str] = None): 976 """get all compatibility reports""" @@ -4204,9 +4245,9 @@Inherited Members
-943 @property -944 def id(self) -> str: -945 return f"{self.concept_id}/{self.version}" + @@ -4222,10 +4263,10 @@Inherited Members
-947 @property -948 def doi(self): -949 """version specific DOI of Zenodo record""" -950 return self.info.doi +@@ -4243,10 +4284,10 @@954 @property +955 def doi(self): +956 """version specific DOI of Zenodo record""" +957 return self.info.doiInherited Members
-952 @property -953 def concept_doi(self): -954 """concept DOI of Zenodo record""" -955 return self.info.concept_doi +@@ -4264,9 +4305,9 @@959 @property +960 def concept_doi(self): +961 """concept DOI of Zenodo record""" +962 return self.info.concept_doiInherited Members
-957 @property -958 def bioimageio_url(self): -959 return f"https://bioimage.io/#/?id={self.concept_id}" +@@ -4282,9 +4323,9 @@964 @property +965 def bioimageio_url(self): +966 return f"https://bioimage.io/#/?id={self.concept_id}"Inherited Members
- - - - - -961 @property -962 def info(self) -> RecordInfo: -963 return self._get_json(RecordInfo) + @@ -4302,47 +4343,8 @@Inherited Members
971 def set_compatibility_report(self, report: CompatiblityReport) -> None: -972 path = self.get_compatibility_report_path(report.tool) -973 self.client.put_and_cache(path, report.model_dump_json().encode()) + @@ -4429,6 +4431,8 @@Inherited Members
get_file_url get_file_urls get_file_paths +get_compatibility_report_path +set_compatibility_report
Method or function hasn't been implemented yet.
\n", "bases": "builtins.NotImplementedError"}, "bioimageio_collection_backoffice.backup.backup": {"fullname": "bioimageio_collection_backoffice.backup.backup", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "backup", "kind": "function", "doc": "backup all published resources to their own zenodo records
\n", "signature": "(client: bioimageio_collection_backoffice.s3_client.Client):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.backup_published_version": {"fullname": "bioimageio_collection_backoffice.backup.backup_published_version", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "backup_published_version", "kind": "function", "doc": "\n", "signature": "(v: bioimageio_collection_backoffice.remote_collection.Record):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators": {"fullname": "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "rdf_authors_to_metadata_creators", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]]):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.rdf_to_metadata": {"fullname": "bioimageio_collection_backoffice.backup.rdf_to_metadata", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "rdf_to_metadata", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]],\t*,\tadditional_note: str = '\\n(Uploaded via https://bioimage.io)',\tpublication_date: datetime.datetime,\trdf_file_name: str) -> Dict[str, Any]:", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf": {"fullname": "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "generate_related_identifiers_from_rdf", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]],\trdf_file_name: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.cache": {"fullname": "bioimageio_collection_backoffice.cache", "modulename": "bioimageio_collection_backoffice.cache", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.cache.Ks": {"fullname": "bioimageio_collection_backoffice.cache.Ks", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "Ks", "kind": "variable", "doc": "\n", "default_value": "Ks"}, "bioimageio_collection_backoffice.cache.CacheInfo": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo", "kind": "class", "doc": "CacheInfo(hits, misses, maxsize, currsize)
\n", "bases": "typing.NamedTuple"}, "bioimageio_collection_backoffice.cache.CacheInfo.__init__": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.__init__", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.__init__", "kind": "function", "doc": "Create new instance of CacheInfo(hits, misses, maxsize, currsize)
\n", "signature": "(hits: int, misses: int, maxsize: int, currsize: int)"}, "bioimageio_collection_backoffice.cache.CacheInfo.hits": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.hits", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.hits", "kind": "variable", "doc": "Alias for field number 0
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.misses": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.misses", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.misses", "kind": "variable", "doc": "Alias for field number 1
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.maxsize": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.maxsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.maxsize", "kind": "variable", "doc": "Alias for field number 2
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.currsize": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.currsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.currsize", "kind": "variable", "doc": "Alias for field number 3
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU", "kind": "class", "doc": "LRU Cache that allows to pop and update cache entries.
\n", "bases": "typing.Generic[typing.Unpack[Ks], ~V]"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.__init__", "kind": "function", "doc": "\n", "signature": "(maxsize: int = 128)"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.maxsize", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.cache_info", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.update": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.update", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.update", "kind": "function", "doc": "update cache (also counts as 'recently used', unless keep_order is True)
UpdatetableLRU with a limit on the sum of cache entry lengths,\nnot the number of cache entries
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "Partner", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.authors": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.authors", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.authors", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio.spec.generic.v0_3.Author]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.cite": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.cite", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.cite", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio.spec.generic.v0_3.CiteEntry]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.config": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.config", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionWebsiteConfigTemplate"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.description": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.description", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.description", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.documentation": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.documentation", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.documentation", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.format_version": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.format_version", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.format_version", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.version_type.Version"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.git_repo": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.git_repo", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.git_repo", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.icon": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.icon", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.icon", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.license": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.license", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.license", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.license_id.LicenseId"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.name": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.name", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.name", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.tags": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.tags", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.tags", "kind": "variable", "doc": "\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.type": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.type", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.type", "kind": "variable", "doc": "\n", "annotation": ": Literal['collection']"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.version": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.version", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.version", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.version_type.Version"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'authors': FieldInfo(annotation=Sequence[Author], required=True), 'cite': FieldInfo(annotation=Sequence[CiteEntry], required=True), 'config': FieldInfo(annotation=CollectionWebsiteConfigTemplate, required=True), 'description': FieldInfo(annotation=str, required=True), 'documentation': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'format_version': FieldInfo(annotation=Version, required=True), 'git_repo': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'icon': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'license': FieldInfo(annotation=LicenseId, required=True), 'name': FieldInfo(annotation=str, required=True), 'tags': FieldInfo(annotation=Sequence[str], required=True), 'type': FieldInfo(annotation=Literal['collection'], required=True), 'version': FieldInfo(annotation=Version, required=True)}"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.id_parts": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "kind": "module", "doc": "describes a file holding all parts to create resource ids
\n"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry", "kind": "class", "doc": "parts to create resource ids for a specific resource type
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.nouns": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.nouns", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.nouns", "kind": "variable", "doc": "\n", "annotation": ": Mapping[str, str]"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.adjectives": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.adjectives", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.adjectives", "kind": "variable", "doc": "\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.get_noun": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.get_noun", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.get_noun", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.validate_concept_id": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.validate_concept_id", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.validate_concept_id", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'nouns': FieldInfo(annotation=Mapping[str, str], required=True), 'adjectives': FieldInfo(annotation=Sequence[str], required=True)}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts", "kind": "class", "doc": "parts to create resource ids
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.dataset": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.dataset", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.dataset", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.notebook": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.notebook", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.notebook", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.get_icon": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.get_icon", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.get_icon", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.select_type": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.select_type", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.select_type", "kind": "function", "doc": "\n", "signature": "(\tself,\ttype_: str) -> bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry:", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'model': FieldInfo(annotation=IdPartsEntry, required=True), 'dataset': FieldInfo(annotation=IdPartsEntry, required=True), 'notebook': FieldInfo(annotation=IdPartsEntry, required=True)}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.reviewers": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nhypha id
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.name": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.name", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.name", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.affiliation": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.affiliation", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.affiliation", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.orcid": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.orcid", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.orcid", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.github_user": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.github_user", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.github_user", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.email": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.email", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.email", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'id': FieldInfo(annotation=str, required=True), 'name': FieldInfo(annotation=str, required=True), 'affiliation': FieldInfo(annotation=str, required=True), 'orcid': FieldInfo(annotation=str, required=True), 'github_user': FieldInfo(annotation=str, required=True), 'email': FieldInfo(annotation=str, required=True)}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewers": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewers", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewers", "kind": "variable", "doc": "\n", "default_value": "typing.Sequence[bioimageio_collection_backoffice.collection_config.reviewers.Reviewer]"}, "bioimageio_collection_backoffice.collection_json": {"fullname": "bioimageio_collection_backoffice.collection_json", "modulename": "bioimageio_collection_backoffice.collection_json", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.collection_json.Author": {"fullname": "bioimageio_collection_backoffice.collection_json.Author", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "Author", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n", "bases": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.collection": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.collection", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.collection", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio_collection_backoffice.collection_json.CollectionEntry]"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.config": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.config", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_json.CollectionWebsiteConfig"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_config": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_config", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_fields", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'authors': FieldInfo(annotation=Sequence[Author], required=True), 'cite': FieldInfo(annotation=Sequence[CiteEntry], required=True), 'config': FieldInfo(annotation=CollectionWebsiteConfig, required=True), 'description': FieldInfo(annotation=str, required=True), 'documentation': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'format_version': FieldInfo(annotation=Version, required=True), 'git_repo': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'icon': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'license': FieldInfo(annotation=LicenseId, required=True), 'name': FieldInfo(annotation=str, required=True), 'tags': FieldInfo(annotation=Sequence[str], required=True), 'type': FieldInfo(annotation=Literal['collection'], required=True), 'version': FieldInfo(annotation=Version, required=True), 'collection': FieldInfo(annotation=Sequence[CollectionEntry], required=True)}"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_json.ConceptVersion": {"fullname": "bioimageio_collection_backoffice.collection_json.ConceptVersion", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "ConceptVersion", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\npydantic models to describe the content of various files\nrelevant for the bioimage.io collection
\n"}, "bioimageio_collection_backoffice.db_structure.chat": {"fullname": "bioimageio_collection_backoffice.db_structure.chat", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "kind": "module", "doc": "<concept_id>/<version>/chat.json keeps a record of version specific comments
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\n<concept_id>/<version>/chat.json keeps a record of version specific comments
messages
\n", "annotation": ": Sequence[bioimageio_collection_backoffice.db_structure.chat.Message]"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.get_updated": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.get_updated", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.get_updated", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.chat.Chat) -> bioimageio_collection_backoffice.db_structure.chat.Chat:", "funcdef": "def"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'messages': FieldInfo(annotation=Sequence[Message], required=False, default_factory=list)}"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.compatibility": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\ntoolname (including version)
\n", "annotation": ": Annotated[str, FieldInfo(annotation=NoneType, required=True, exclude=True)]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.status": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.status", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.status", "kind": "variable", "doc": "status of this tool for this resource
\n", "annotation": ": Literal['passed', 'failed', 'not-applicable']"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.error": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.error", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.error", "kind": "variable", "doc": "error message if status=='failed'
details to explain the status
status badge with a resource specific link to the tool
\n", "annotation": ": Optional[bioimageio_collection_backoffice.collection_json.Badge]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.links": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.links", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.links", "kind": "variable", "doc": "the checked resource should link these other bioimage.io resources
\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'allow', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'tool': FieldInfo(annotation=str, required=True, exclude=True), 'status': FieldInfo(annotation=Literal['passed', 'failed', 'not-applicable'], required=True), 'error': FieldInfo(annotation=Union[str, NoneType], required=True), 'details': FieldInfo(annotation=Any, required=True), 'badge': FieldInfo(annotation=Union[Badge, NoneType], required=False, default=None), 'links': FieldInfo(annotation=Sequence[str], required=False, default=())}"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "TestSummaryEntry", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nlog message
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.details": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.details", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.details", "kind": "variable", "doc": "log details
\n", "annotation": ": Any"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.timestamp": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.timestamp", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.timestamp", "kind": "variable", "doc": "creation of log entry
\n", "annotation": ": datetime.datetime"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.run_url": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.run_url", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.run_url", "kind": "variable", "doc": "gh action run url
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'message': FieldInfo(annotation=str, required=False, default=''), 'details': FieldInfo(annotation=Any, required=False, default=None), 'timestamp': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'run_url': FieldInfo(annotation=Union[str, NoneType], required=False, default=None)}"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.log.Log": {"fullname": "bioimageio_collection_backoffice.db_structure.log.Log", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "Log", "kind": "class", "doc": "<concept_id>/<version>/log.json contains a version specific log
<concept_id>/<version>/reserved.json allows to reserve a concept id
<concept_id>/<version>/reserved.json allows to reserve a concept id
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nfollowing AcceptedStatus
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\n<concept_id>/draft/draft.json contains the collection entry metadata
<concept_id>/info.json contains the collection entry metadata
version specific DOI
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.download_count": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.download_count", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.download_count", "kind": "variable", "doc": "\n", "annotation": ": Union[int, Literal['?']]"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.get_updated": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.get_updated", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.get_updated", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.RecordInfo) -> bioimageio_collection_backoffice.db_structure.version_info.RecordInfo:", "funcdef": "def"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'created': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'concept_doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'download_count': FieldInfo(annotation=Union[int, Literal['?']], required=False, default='?')}"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nversion specific DOI
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.v": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.v", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.v", "kind": "variable", "doc": "version
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'created': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'v': FieldInfo(annotation=str, required=True)}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionsInfo", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nClient to connect to remote storage
\n", "annotation": ": bioimageio_collection_backoffice.s3_client.Client"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.id": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.id", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.folder": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.folder", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.folder", "kind": "variable", "doc": "The S3 (sub)prefix of this resource
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.log.Log"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log_message": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log_message", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log_message", "kind": "function", "doc": "\n", "signature": "(self, message: str, details: Optional[Any] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log_error": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log_error", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log_error", "kind": "function", "doc": "\n", "signature": "(self, error: Union[Exception, str], details: Optional[Any] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection": {"fullname": "bioimageio_collection_backoffice.remote_collection", "modulename": "bioimageio_collection_backoffice.remote_collection", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.yaml": {"fullname": "bioimageio_collection_backoffice.remote_collection.yaml", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "yaml", "kind": "variable", "doc": "\n", "default_value": "<ruyaml.main.YAML object>"}, "bioimageio_collection_backoffice.remote_collection.LEGACY_DOWNLOAD_COUNTS": {"fullname": "bioimageio_collection_backoffice.remote_collection.LEGACY_DOWNLOAD_COUNTS", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "LEGACY_DOWNLOAD_COUNTS", "kind": "variable", "doc": "\n", "default_value": "{'affable-shark': 70601, 'ambitious-ant': 5830, 'ambitious-sloth': 12735, 'amiable-crocodile': 2516, 'chatty-frog': 54555, 'conscientious-seashell': 33362, 'courteous-otter': 4519, 'creative-panda': 35927, 'determined-chipmunk': 18747, 'discreet-rooster': 42990, 'easy-going-sauropod': 12717, 'efficient-chipmunk': 3556, 'emotional-cricket': 36653, 'fearless-crab': 39638, 'hiding-blowfish': 41816, 'hiding-tiger': 45822, 'humorous-owl': 40313, 'impartial-shark': 20822, 'impartial-shrimp': 44942, 'independent-shrimp': 23638, 'joyful-deer': 19265, 'kind-seashell': 40486, 'laid-back-lobster': 25850, 'loyal-parrot': 37100, 'loyal-squid': 30836, 'modest-octopus': 8531, 'naked-microbe': 23086, 'nice-peacock': 13995, 'noisy-fish': 12501, 'noisy-hedgehog': 6793, 'non-judgemental-eagle': 36554, 'organized-badger': 39777, 'organized-cricket': 10156, 'passionate-t-rex': 24267, 'pioneering-rhino': 28176, 'placid-llama': 39063, 'polite-pig': 21235, 'powerful-chipmunk': 35455, 'powerful-fish': 31743, 'shivering-raccoon': 34761, 'straightforward-crocodile': 25477, 'thoughtful-turtle': 25874, 'wild-whale': 29530, 'willing-hedgehog': 37772}"}, "bioimageio_collection_backoffice.remote_collection.LEGACY_VERSIONS": {"fullname": "bioimageio_collection_backoffice.remote_collection.LEGACY_VERSIONS", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "LEGACY_VERSIONS", "kind": "variable", "doc": "\n", "default_value": "{'10.5281/zenodo.5764892': ['6647674', '6322939'], '10.5281/zenodo.6338614': ['6338615'], '10.5281/zenodo.5869899': ['6647688', '6321179', '5869900'], '10.5281/zenodo.5874741': ['5874742'], '10.5281/zenodo.5914248': ['8186255', '6514622', '6514446', '5914249'], '10.5281/zenodo.6406756': ['6811922', '6811498', '6406757'], '10.5281/zenodo.5874841': ['6630266', '5874842'], '10.5281/zenodo.5749843': ['5888237'], '10.5281/zenodo.6028097': ['6028098'], '10.5281/zenodo.6348084': ['6348085'], '10.5281/zenodo.7261974': ['7782776', '7778377', '7688940', '7546703', '7261975'], '10.5281/zenodo.6028280': ['6647695', '6028281'], '10.5281/zenodo.6200635': ['7702687', '6538890', '6200636'], '10.5281/zenodo.6346511': ['7768142', '7701413', '6346512'], '10.5281/zenodo.6348728': ['6348729'], '10.5281/zenodo.5817052': ['5906839', '5850574'], '10.5281/zenodo.5847355': ['6647683', '6322908'], '10.5281/zenodo.6406803': ['6406804'], '10.5281/zenodo.6200999': ['7690494', '7678300', '6538911', '6224243'], '10.5281/zenodo.6384845': ['7774490', '7701638', '6384846'], '10.5281/zenodo.6383429': ['7774505', '7701632', '6383430'], '10.5281/zenodo.6079314': ['7695872', '7689587', '7688686', '6385590', '6079315'], '10.5281/zenodo.6334383': ['7805067', '7701262', '7697068', '6346500', '6334384'], '10.5281/zenodo.6334881': ['7805026', '7701241', '7696907', '6346477', '6334882'], '10.5281/zenodo.6334777': ['7765026', '7701561', '7696952', '6346524', '6334778'], '10.5281/zenodo.5910854': ['6539073', '5911832'], '10.5281/zenodo.6334583': ['7805434', '7768223', '7701492', '7696919', '6346519', '6334584'], '10.5281/zenodo.6811491': ['6811492'], '10.5281/zenodo.6559474': ['6559475'], '10.5281/zenodo.5910163': ['5942853'], '10.5281/zenodo.6865412': ['6919253'], '10.5281/zenodo.7274275': ['8123818', '7274276'], '10.5281/zenodo.6808325': ['6808413'], '10.5281/zenodo.7315440': ['7315441'], '10.5281/zenodo.7380171': ['7405349'], '10.5281/zenodo.7614645': ['7642674'], '10.5281/zenodo.7772662': ['7781091'], '10.5281/zenodo.7786492': ['7786493'], '10.5281/zenodo.8421755': ['8432366'], '10.5281/zenodo.8064806': ['8073617'], '10.5281/zenodo.6559929': ['6559930'], '10.5281/zenodo.8419845': ['8420081'], '10.5281/zenodo.8420099': ['8420100'], '10.5281/zenodo.8401064': ['8429203', '8401065'], '10.5281/zenodo.8142283': ['8171247'], '10.5281/zenodo.7612115': ['7612152']}"}, "bioimageio_collection_backoffice.remote_collection.P": {"fullname": "bioimageio_collection_backoffice.remote_collection.P", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "P", "kind": "variable", "doc": "\n", "default_value": "~P"}, "bioimageio_collection_backoffice.remote_collection.log": {"fullname": "bioimageio_collection_backoffice.remote_collection.log", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "log", "kind": "function", "doc": "method decorator to indicate that a method execution should be logged
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.reviewer_role": {"fullname": "bioimageio_collection_backoffice.remote_collection.reviewer_role", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "reviewer_role", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, str, ~P], ~T]) -> Callable[Concatenate[~R, str, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.lock_concept": {"fullname": "bioimageio_collection_backoffice.remote_collection.lock_concept", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "lock_concept", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.lock_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.lock_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "lock_version", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection", "kind": "class", "doc": "A representation of a (the) bioimage.io collection
\n", "bases": "bioimageio_collection_backoffice.remote_base.RemoteBase"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.__init__", "kind": "function", "doc": "\n", "signature": "(client: bioimageio_collection_backoffice.s3_client.Client)"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.client": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.client", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.client", "kind": "variable", "doc": "Client to connect to remote storage
\n", "annotation": ": bioimageio_collection_backoffice.s3_client.Client"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.folder": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.folder", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.folder", "kind": "variable", "doc": "collection folder is given by the client prefix
collection.json url
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.config": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.config", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.CollectionConfig"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.partner_ids": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.partner_ids", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.partner_ids", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_concepts": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_concepts", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_concepts", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.validate_concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.validate_concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.validate_concept_id", "kind": "function", "doc": "check if a concept id follows the defined pattern (not if it exists)
\n", "signature": "(self, concept_id: str, *, type_: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_concpet_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_concpet_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.generate_concpet_id", "kind": "function", "doc": "generate a new, unused concept id
\n", "signature": "(self, type_: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.reserve_concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.reserve_concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.reserve_concept_id", "kind": "function", "doc": "\n", "signature": "(self, concept_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_taken_concept_ids": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_taken_concept_ids", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_taken_concept_ids", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_drafts": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_drafts", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_drafts", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_published_versions": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_published_versions", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_published_versions", "kind": "function", "doc": "\n", "signature": "(self) -> List[bioimageio_collection_backoffice.remote_collection.Record]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.generate_collection_json", "kind": "function", "doc": "generate a json file with an overview of all published resources\n(also generates versions.json files for each research concept)
A representation of a bioimage.io resource\n(not a specific staged or published version of it)
\n", "bases": "bioimageio_collection_backoffice.remote_base.RemoteBase"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str)"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.collection": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.collection", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.collection", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.remote_collection.RemoteCollection"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.concept_id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.id", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.draft", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.remote_collection.RecordDraft"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.get_published_versions", "kind": "function", "doc": "Get representations of the published version
\n", "signature": "(self) -> List[bioimageio_collection_backoffice.remote_collection.Record]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft_new_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft_new_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.draft_new_version", "kind": "function", "doc": "Stage the content at package_url as a new resource version candidate.
(version unspecific) Zenodo concept DOI of the\nlatest published version of this resource concept
\n"}, "bioimageio_collection_backoffice.remote_collection.Uploader": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader", "kind": "class", "doc": "Uploader(email, name)
\n", "bases": "typing.NamedTuple"}, "bioimageio_collection_backoffice.remote_collection.Uploader.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.__init__", "kind": "function", "doc": "Create new instance of Uploader(email, name)
\n", "signature": "(email: ForwardRef('Optional[str]'), name: str)"}, "bioimageio_collection_backoffice.remote_collection.Uploader.email": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.email", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.email", "kind": "variable", "doc": "Alias for field number 0
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.remote_collection.Uploader.name": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.name", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.name", "kind": "variable", "doc": "Alias for field number 1
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordBase": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase", "kind": "class", "doc": "Base class for a RemoteDraft and RemoteVersion
rdf.yaml download URL
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.chat": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.chat", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.chat", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.chat.Chat"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.add_log_entry": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.add_log_entry", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.add_log_entry", "kind": "function", "doc": "add a log entry
\n", "signature": "(\tself,\tlog_entry: bioimageio_collection_backoffice.db_structure.log.LogEntry):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_log": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_log", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.extend_log", "kind": "function", "doc": "extend log file
\n", "signature": "(\tself,\textension: bioimageio_collection_backoffice.db_structure.log.Log):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_chat": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_chat", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.extend_chat", "kind": "function", "doc": "extend chat file
\n", "signature": "(\tself,\textension: bioimageio_collection_backoffice.db_structure.chat.Chat):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_uploader": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_uploader", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_uploader", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_url", "kind": "function", "doc": "\n", "signature": "(self, path: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_urls": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_urls", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_urls", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_paths": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_paths", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_paths", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft", "kind": "class", "doc": "A staged resource version
\n", "bases": "RecordBase"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str)"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.version": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.version", "kind": "variable", "doc": "\n", "annotation": ": ClassVar[str]", "default_value": "'draft'"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.doi", "kind": "variable", "doc": "\n", "annotation": ": ClassVar[NoneType]", "default_value": "None"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.folder": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.folder", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.folder", "kind": "variable", "doc": "The S3 (sub)prefix of this version\n(sub)prefix, because the client may prefix this prefix
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.info": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.info", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.version_info.DraftInfo"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.update_info": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.update_info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.update_info", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.DraftInfo):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.bioimageio_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.bioimageio_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.bioimageio_url", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.concept_doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.concept_doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.concept_doi", "kind": "variable", "doc": "concept DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.unpack": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.unpack", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.unpack", "kind": "function", "doc": "\n", "signature": "(self, package_url: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.set_testing_status": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.set_testing_status", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.set_testing_status", "kind": "function", "doc": "\n", "signature": "(self, description: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.await_review": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.await_review", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.await_review", "kind": "function", "doc": "set status to 'awaiting review'
\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.request_changes": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.request_changes", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.request_changes", "kind": "function", "doc": "\n", "signature": "(self, reviewer: str, reason: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.publish": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.publish", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.publish", "kind": "function", "doc": "mark this staged version candidate as accepted and try to publish it
\n", "signature": "(\tself,\treviewer: str) -> bioimageio_collection_backoffice.remote_collection.Record:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record", "kind": "class", "doc": "A representation of a published resource version
\n", "bases": "RecordBase"}, "bioimageio_collection_backoffice.remote_collection.Record.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str,\tversion: str)"}, "bioimageio_collection_backoffice.remote_collection.Record.version": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.version", "kind": "variable", "doc": "a (semantic) version string
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.Record.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.Record.doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.doi", "kind": "variable", "doc": "version specific DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.Record.concept_doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.concept_doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.concept_doi", "kind": "variable", "doc": "concept DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.Record.bioimageio_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.bioimageio_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.bioimageio_url", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.Record.info": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.info", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.version_info.RecordInfo"}, "bioimageio_collection_backoffice.remote_collection.Record.update_info": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.update_info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.update_info", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.RecordInfo):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.get_compatibility_report_path": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.get_compatibility_report_path", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.get_compatibility_report_path", "kind": "function", "doc": "\n", "signature": "(self, tool: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.set_compatibility_report": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.set_compatibility_report", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.set_compatibility_report", "kind": "function", "doc": "\n", "signature": "(\tself,\treport: bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.get_all_compatibility_reports": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.get_all_compatibility_reports", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.get_all_compatibility_reports", "kind": "function", "doc": "get all compatibility reports
\n", "signature": "(self, tool: Optional[str] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.set_dois": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.set_dois", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.set_dois", "kind": "function", "doc": "\n", "signature": "(self, *, doi: str, concept_doi: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.get_remote_resource_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.get_remote_resource_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "get_remote_resource_version", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str,\tversion: Union[int, float, str]):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.maybe_swap_with_thumbnail": {"fullname": "bioimageio_collection_backoffice.remote_collection.maybe_swap_with_thumbnail", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "maybe_swap_with_thumbnail", "kind": "function", "doc": "\n", "signature": "(\tsrc: Union[Any, Dict[Any, Any], List[Any]],\tthumbnails: Mapping[str, str]) -> Any:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.resolve_relative_path": {"fullname": "bioimageio_collection_backoffice.remote_collection.resolve_relative_path", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "resolve_relative_path", "kind": "function", "doc": "\n", "signature": "(\tsrc: Union[Any, Dict[Any, Any], List[Any]],\tparsed_root: urllib.parse.SplitResult) -> Any:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.create_collection_entries": {"fullname": "bioimageio_collection_backoffice.remote_collection.create_collection_entries", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "create_collection_entries", "kind": "function", "doc": "create collection entries from a single (draft) record
\n", "signature": "(\tversions: Sequence[Union[bioimageio_collection_backoffice.remote_collection.Record, bioimageio_collection_backoffice.remote_collection.RecordDraft]]) -> Tuple[List[bioimageio_collection_backoffice.collection_json.CollectionEntry], Mapping[str, bioimageio_collection_backoffice.id_map.IdInfo]]:", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils": {"fullname": "bioimageio_collection_backoffice.requests_utils", "modulename": "bioimageio_collection_backoffice.requests_utils", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely": {"fullname": "bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "raise_for_status_discretely", "kind": "function", "doc": "Raises HTTPError, if one occurred,\nbut removes query from url to avoid leaking access tokens, etc.
adapted from requests.Response.raise_for_status
\n", "signature": "(response: requests.models.Response):", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils.put_file_from_url": {"fullname": "bioimageio_collection_backoffice.requests_utils.put_file_from_url", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "put_file_from_url", "kind": "function", "doc": "Gets a remote file and pushes it up to a destination
\n", "signature": "(file_url: str, destination_url: str, params: Dict[str, Any]) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils.put_file": {"fullname": "bioimageio_collection_backoffice.requests_utils.put_file", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "put_file", "kind": "function", "doc": "\n", "signature": "(file_object: _io.BytesIO, url: str, params: Dict[str, Any]):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.run_dynamic_tests.yaml": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.yaml", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "yaml", "kind": "variable", "doc": "\n", "default_value": "<ruyaml.main.YAML object>"}, "bioimageio_collection_backoffice.run_dynamic_tests.get_summary_detail_from_exception": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.get_summary_detail_from_exception", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "get_summary_detail_from_exception", "kind": "function", "doc": "\n", "signature": "(name: str, exception: Exception):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests.run_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.run_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "run_dynamic_tests", "kind": "function", "doc": "\n", "signature": "(\tstaged: bioimageio_collection_backoffice.remote_collection.RecordDraft,\tweight_format: Optional[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']],\tcreate_env_outcome: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests.rerun_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.rerun_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "rerun_dynamic_tests", "kind": "function", "doc": "\n", "signature": "(\tpublished: bioimageio_collection_backoffice.remote_collection.Record,\tweight_format: Optional[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']],\tcreate_env_outcome: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client": {"fullname": "bioimageio_collection_backoffice.s3_client", "modulename": "bioimageio_collection_backoffice.s3_client", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.s3_client.Client": {"fullname": "bioimageio_collection_backoffice.s3_client.Client", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client", "kind": "class", "doc": "Convenience wrapper around a Minio S3 client
S3 host
\n", "annotation": ": str", "default_value": "'uk1s3.embassy.ebi.ac.uk'"}, "bioimageio_collection_backoffice.s3_client.Client.bucket": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.bucket", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.bucket", "kind": "variable", "doc": "S3 bucket
\n", "annotation": ": str", "default_value": "'public-datasets'"}, "bioimageio_collection_backoffice.s3_client.Client.prefix": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.prefix", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.prefix", "kind": "variable", "doc": "S3 prefix ('root folder')
\n", "annotation": ": str", "default_value": "'testing.bioimage.io/runner/instance'"}, "bioimageio_collection_backoffice.s3_client.Client.access_key": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.access_key", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.access_key", "kind": "variable", "doc": "S3 access key
\n", "annotation": ": pydantic.types.SecretStr", "default_value": "SecretStr('')"}, "bioimageio_collection_backoffice.s3_client.Client.secret_key": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.secret_key", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.secret_key", "kind": "variable", "doc": "S3 secret key
\n", "annotation": ": pydantic.types.SecretStr", "default_value": "SecretStr('')"}, "bioimageio_collection_backoffice.s3_client.Client.max_bytes_cached": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.max_bytes_cached", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.max_bytes_cached", "kind": "variable", "doc": "\n", "annotation": ": int", "default_value": "1000000000"}, "bioimageio_collection_backoffice.s3_client.Client.put_and_cache": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_and_cache", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_and_cache", "kind": "function", "doc": "\n", "signature": "(self, path: str, file: bytes):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put", "kind": "function", "doc": "upload a file(like object)
\n", "signature": "(\tself,\tpath: str,\tfile_object: Union[_io.BytesIO, BinaryIO],\tlength: Optional[int]) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_pydantic": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_pydantic", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_pydantic", "kind": "function", "doc": "convenience method to upload a json file from a pydantic model
\n", "signature": "(self, path: str, obj: pydantic.main.BaseModel):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_json": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_json", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_json", "kind": "function", "doc": "convenience method to upload a json file from a json serializable value
\n", "signature": "(self, path: str, json_value: Any):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_json_string": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_json_string", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_json_string", "kind": "function", "doc": "\n", "signature": "(self, path: str, json_str: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.get_file_urls": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.get_file_urls", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.get_file_urls", "kind": "function", "doc": "Checks an S3 'folder' for its list of files
\n", "signature": "(self, path: str = '') -> List[str]:", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.ls": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.ls", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.ls", "kind": "function", "doc": "List folder contents, non-recursive, ala ls but no \".\" or \"..\"
copy and delete all objects under src to tgt
remove all objects under prefix
Load file
\n\nReturns:\n file content or None if no object at path was found.
Get the full URL to path
update a conda env such that we have bioimageio.core and the collection backoffice available
\n", "signature": "(\tenv: bioimageio_collection_backoffice.validate_format.CondaEnv,\tenv_name: Optional[str] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_base_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_base_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_base_env", "kind": "function", "doc": "\n", "signature": "():", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_env_from_deps": {"fullname": "bioimageio_collection_backoffice.validate_format.get_env_from_deps", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_env_from_deps", "kind": "function", "doc": "\n", "signature": "(\tdeps: Union[bioimageio.spec.model.v0_4.Dependencies, bioimageio.spec.model.v0_5.EnvironmentFileDescr]) -> bioimageio_collection_backoffice.validate_format.CondaEnv:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_version_range": {"fullname": "bioimageio_collection_backoffice.validate_format.get_version_range", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_version_range", "kind": "function", "doc": "\n", "signature": "(v: bioimageio.spec._internal.version_type.Version) -> str:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_onnx_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_onnx_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_onnx_env", "kind": "function", "doc": "\n", "signature": "(*, opset_version: Optional[int]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_pytorch_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_pytorch_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_pytorch_env", "kind": "function", "doc": "\n", "signature": "(\t*,\tpytorch_version: Optional[bioimageio.spec._internal.version_type.Version] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_tf_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_tf_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_tf_env", "kind": "function", "doc": "\n", "signature": "(\ttensorflow_version: Optional[bioimageio.spec._internal.version_type.Version]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_conda_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_conda_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_conda_env", "kind": "function", "doc": "\n", "signature": "(\t*,\tentry: Union[bioimageio.spec.model.v0_4.OnnxWeightsDescr, bioimageio.spec.model.v0_4.PytorchStateDictWeightsDescr, bioimageio.spec.model.v0_4.TensorflowSavedModelBundleWeightsDescr, bioimageio.spec.model.v0_4.TorchscriptWeightsDescr, bioimageio.spec.model.v0_5.OnnxWeightsDescr, bioimageio.spec.model.v0_5.PytorchStateDictWeightsDescr, bioimageio.spec.model.v0_5.TensorflowSavedModelBundleWeightsDescr, bioimageio.spec.model.v0_5.TorchscriptWeightsDescr],\tenv_name: str) -> bioimageio_collection_backoffice.validate_format.CondaEnv:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.ensure_valid_conda_env_name": {"fullname": "bioimageio_collection_backoffice.validate_format.ensure_valid_conda_env_name", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "ensure_valid_conda_env_name", "kind": "function", "doc": "\n", "signature": "(name: str) -> str:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.prepare_dynamic_test_cases": {"fullname": "bioimageio_collection_backoffice.validate_format.prepare_dynamic_test_cases", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "prepare_dynamic_test_cases", "kind": "function", "doc": "\n", "signature": "(\trd: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]]) -> Tuple[List[Dict[Literal['weight_format'], Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']]], Dict[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript'], bioimageio_collection_backoffice.validate_format.CondaEnv]]:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.validate_format": {"fullname": "bioimageio_collection_backoffice.validate_format.validate_format", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "validate_format", "kind": "function", "doc": "\n", "signature": "(\trv: Union[bioimageio_collection_backoffice.remote_collection.RecordDraft, bioimageio_collection_backoffice.remote_collection.Record]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.validate_format_impl": {"fullname": "bioimageio_collection_backoffice.validate_format.validate_format_impl", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "validate_format_impl", "kind": "function", "doc": "\n", "signature": "(rdf_source: str):", "funcdef": "def"}}, "docInfo": {"bioimageio_collection_backoffice": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup": {"qualname": 0, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.yaml": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.SkipForNow": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 11}, "bioimageio_collection_backoffice.backup.backup": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 11}, "bioimageio_collection_backoffice.backup.backup_published_version": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators": {"qualname": 5, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 700, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.rdf_to_metadata": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 782, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf": {"qualname": 5, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 713, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache": {"qualname": 0, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.Ks": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.CacheInfo": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 8}, "bioimageio_collection_backoffice.cache.CacheInfo.__init__": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 44, "bases": 0, "doc": 12}, "bioimageio_collection_backoffice.cache.CacheInfo.hits": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.misses": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.maxsize": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.currsize": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.UpdatetableLRU": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 13}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 21, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.update": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 85, "bases": 0, "doc": 17}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.pop": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.SizedValueLRU": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 8, "doc": 21}, "bioimageio_collection_backoffice.collection_config": {"qualname": 0, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig": {"qualname": 1, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 277}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.collection_template": {"qualname": 3, "fullname": 8, "annotation": 10, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.id_parts": {"qualname": 3, "fullname": 8, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.reviewers": {"qualname": 2, "fullname": 7, "annotation": 8, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.partners": {"qualname": 2, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.load": {"qualname": 2, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 11, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_config": {"qualname": 3, "fullname": 8, "annotation": 0, "default_value": 40, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_fields": {"qualname": 3, "fullname": 8, "annotation": 0, "default_value": 31, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_computed_fields": {"qualname": 4, "fullname": 9, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template": {"qualname": 0, "fullname": 8, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"qualname": 1, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 277}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.background_image": {"qualname": 3, "fullname": 11, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.default_type": {"qualname": 3, "fullname": 11, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.explore_button_text": {"qualname": 4, "fullname": 12, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.id": {"qualname": 2, "fullname": 10, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.icon": {"qualname": 2, "fullname": 10, "annotation": 33, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.logo": {"qualname": 2, "fullname": 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"bioimageio_collection_backoffice.collection_json.CollectionEntry": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.CollectionWebsiteConfig": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.ConceptVersion": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.ConceptSummary": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.AllVersions": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.common.Node": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.chat.Message": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummary": {"tf": 1.4142135623730951}, 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"bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.id_map.IdInfo": {"tf": 1.4142135623730951}}, "df": 28}}}}}, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"bioimageio_collection_backoffice.db_structure.chat": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.chat.Chat": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.tool": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.log.Log": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.reserved": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.reserved.Reserved": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.doi": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.doi": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.v": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordConcept": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft_new_version": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.doi": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.remote_collection.RecordDraft": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.folder": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.publish": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.Record": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.Record.version": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.Record.doi": {"tf": 1}}, "df": 19, "s": {"docs": {"bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"tf": 1}}, "df": 1}}}}}}}}, "g": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "i": {"docs": {}, "df": 0, "c": {"docs": {"bioimageio_collection_backoffice.collection_config.CollectionConfig": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionWebsiteConfigTemplate": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.Author": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.Badge": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.TrainingData": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.CollectionEntry": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.CollectionWebsiteConfig": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.ConceptVersion": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.ConceptSummary": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.collection_json.AllVersions": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.common.Node": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.chat.Message": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummary": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.log.LogEntry": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.UnpackingStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.UnpackedStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.TestingStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.AwaitingReviewStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.ChangesRequestedStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.AcceptedStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.ErrorStatus": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.id_map.IdInfo": {"tf": 1.4142135623730951}}, "df": 28, "s": {"docs": {"bioimageio_collection_backoffice.collection_config.CollectionConfig": {"tf": 1}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"tf": 1}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionWebsiteConfigTemplate": {"tf": 1}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.Author": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.Badge": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.TrainingData": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.CollectionEntry": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.CollectionWebsiteConfig": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.ConceptVersion": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.ConceptSummary": {"tf": 1}, "bioimageio_collection_backoffice.collection_json.AllVersions": {"tf": 1}, "bioimageio_collection_backoffice.common.Node": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.chat.Message": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummary": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.log.LogEntry": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.UnpackingStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.UnpackedStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.TestingStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.AwaitingReviewStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.ChangesRequestedStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.AcceptedStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.ErrorStatus": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo": {"tf": 1}, "bioimageio_collection_backoffice.id_map.IdInfo": {"tf": 1}}, "df": 28}}}, "a": {"docs": {}, "df": 0, "t": {"docs": {}, "df": 0, "e": {"docs": {"bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_concpet_id": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"tf": 1}}, "df": 2, "s": {"docs": {"bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"tf": 1}}, "df": 1}}}}}}}, "t": {"docs": {"bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.Record.get_all_compatibility_reports": {"tf": 1}, "bioimageio_collection_backoffice.s3_client.Client.get_file_url": {"tf": 1}}, "df": 3, "s": {"docs": {"bioimageio_collection_backoffice.requests_utils.put_file_from_url": {"tf": 1}}, "df": 1}}}, "t": {"docs": {"bioimageio_collection_backoffice.db_structure.chat": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.chat.Chat": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.log.Log": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.reserved": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.reserved.Reserved": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.db_structure.version_info.DraftInfo": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo": {"tf": 1}}, "df": 7}, "h": {"docs": {"bioimageio_collection_backoffice.db_structure.log.LogEntry.run_url": {"tf": 1}}, "df": 1}, "i": {"docs": {}, "df": 0, "v": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "n": {"docs": {"bioimageio_collection_backoffice.remote_collection.RemoteCollection.folder": {"tf": 1}}, "df": 1}}}}}, "j": {"docs": {}, "df": 0, "s": {"docs": {}, "df": 0, "o": {"docs": {}, "df": 0, "n": {"docs": {"bioimageio_collection_backoffice.db_structure.chat": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.chat.Chat": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.log.Log": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.reserved": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.reserved.Reserved": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.DraftInfo": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.url": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.s3_client.Client.put_pydantic": {"tf": 1}, "bioimageio_collection_backoffice.s3_client.Client.put_json": {"tf": 1.4142135623730951}}, "df": 11}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely": {"tf": 1}}, "df": 1}}}}}}}}, "pipeline": ["trimmer"], "_isPrebuiltIndex": true}; + /** pdoc search index */const docs = {"version": "0.9.5", "fields": ["qualname", "fullname", "annotation", "default_value", "signature", "bases", "doc"], "ref": "fullname", "documentStore": {"docs": {"bioimageio_collection_backoffice": {"fullname": "bioimageio_collection_backoffice", "modulename": "bioimageio_collection_backoffice", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.backup": {"fullname": "bioimageio_collection_backoffice.backup", "modulename": "bioimageio_collection_backoffice.backup", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.backup.yaml": {"fullname": "bioimageio_collection_backoffice.backup.yaml", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "yaml", "kind": "variable", "doc": "\n", "default_value": "<ruyaml.main.YAML object>"}, "bioimageio_collection_backoffice.backup.SkipForNow": {"fullname": "bioimageio_collection_backoffice.backup.SkipForNow", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "SkipForNow", "kind": "class", "doc": "Method or function hasn't been implemented yet.
\n", "bases": "builtins.NotImplementedError"}, "bioimageio_collection_backoffice.backup.backup": {"fullname": "bioimageio_collection_backoffice.backup.backup", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "backup", "kind": "function", "doc": "backup all published resources to their own zenodo records
\n", "signature": "(client: bioimageio_collection_backoffice.s3_client.Client):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.backup_published_version": {"fullname": "bioimageio_collection_backoffice.backup.backup_published_version", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "backup_published_version", "kind": "function", "doc": "\n", "signature": "(v: bioimageio_collection_backoffice.remote_collection.Record):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators": {"fullname": "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "rdf_authors_to_metadata_creators", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]]):", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.rdf_to_metadata": {"fullname": "bioimageio_collection_backoffice.backup.rdf_to_metadata", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "rdf_to_metadata", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]],\t*,\tadditional_note: str = '\\n(Uploaded via https://bioimage.io)',\tpublication_date: datetime.datetime,\trdf_file_name: str) -> Dict[str, Any]:", "funcdef": "def"}, "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf": {"fullname": "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf", "modulename": "bioimageio_collection_backoffice.backup", "qualname": "generate_related_identifiers_from_rdf", "kind": "function", "doc": "\n", "signature": "(\trdf: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]],\trdf_file_name: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.cache": {"fullname": "bioimageio_collection_backoffice.cache", "modulename": "bioimageio_collection_backoffice.cache", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.cache.Ks": {"fullname": "bioimageio_collection_backoffice.cache.Ks", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "Ks", "kind": "variable", "doc": "\n", "default_value": "Ks"}, "bioimageio_collection_backoffice.cache.CacheInfo": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo", "kind": "class", "doc": "CacheInfo(hits, misses, maxsize, currsize)
\n", "bases": "typing.NamedTuple"}, "bioimageio_collection_backoffice.cache.CacheInfo.__init__": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.__init__", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.__init__", "kind": "function", "doc": "Create new instance of CacheInfo(hits, misses, maxsize, currsize)
\n", "signature": "(hits: int, misses: int, maxsize: int, currsize: int)"}, "bioimageio_collection_backoffice.cache.CacheInfo.hits": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.hits", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.hits", "kind": "variable", "doc": "Alias for field number 0
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.misses": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.misses", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.misses", "kind": "variable", "doc": "Alias for field number 1
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.maxsize": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.maxsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.maxsize", "kind": "variable", "doc": "Alias for field number 2
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.CacheInfo.currsize": {"fullname": "bioimageio_collection_backoffice.cache.CacheInfo.currsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "CacheInfo.currsize", "kind": "variable", "doc": "Alias for field number 3
\n", "annotation": ": int"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU", "kind": "class", "doc": "LRU Cache that allows to pop and update cache entries.
\n", "bases": "typing.Generic[typing.Unpack[Ks], ~V]"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.__init__", "kind": "function", "doc": "\n", "signature": "(maxsize: int = 128)"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.maxsize", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.cache_info", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.update": {"fullname": "bioimageio_collection_backoffice.cache.UpdatetableLRU.update", "modulename": "bioimageio_collection_backoffice.cache", "qualname": "UpdatetableLRU.update", "kind": "function", "doc": "update cache (also counts as 'recently used', unless keep_order is True)
UpdatetableLRU with a limit on the sum of cache entry lengths,\nnot the number of cache entries
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "Partner", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.authors": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.authors", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.authors", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio.spec.generic.v0_3.Author]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.cite": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.cite", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.cite", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio.spec.generic.v0_3.CiteEntry]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.config": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.config", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionWebsiteConfigTemplate"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.description": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.description", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.description", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.documentation": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.documentation", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.documentation", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.format_version": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.format_version", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.format_version", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.version_type.Version"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.git_repo": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.git_repo", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.git_repo", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.icon": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.icon", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.icon", "kind": "variable", "doc": "\n", "annotation": ": Annotated[pydantic_core._pydantic_core.Url, UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.license": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.license", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.license", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.license_id.LicenseId"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.name": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.name", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.name", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.tags": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.tags", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.tags", "kind": "variable", "doc": "\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.type": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.type", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.type", "kind": "variable", "doc": "\n", "annotation": ": Literal['collection']"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.version": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.version", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.version", "kind": "variable", "doc": "\n", "annotation": ": bioimageio.spec._internal.version_type.Version"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'authors': FieldInfo(annotation=Sequence[Author], required=True), 'cite': FieldInfo(annotation=Sequence[CiteEntry], required=True), 'config': FieldInfo(annotation=CollectionWebsiteConfigTemplate, required=True), 'description': FieldInfo(annotation=str, required=True), 'documentation': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'format_version': FieldInfo(annotation=Version, required=True), 'git_repo': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'icon': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'license': FieldInfo(annotation=LicenseId, required=True), 'name': FieldInfo(annotation=str, required=True), 'tags': FieldInfo(annotation=Sequence[str], required=True), 'type': FieldInfo(annotation=Literal['collection'], required=True), 'version': FieldInfo(annotation=Version, required=True)}"}, "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.collection_json_template", "qualname": "CollectionJsonTemplate.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.id_parts": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "kind": "module", "doc": "describes a file holding all parts to create resource ids
\n"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry", "kind": "class", "doc": "parts to create resource ids for a specific resource type
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.nouns": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.nouns", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.nouns", "kind": "variable", "doc": "\n", "annotation": ": Mapping[str, str]"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.adjectives": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.adjectives", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.adjectives", "kind": "variable", "doc": "\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.get_noun": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.get_noun", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.get_noun", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.validate_concept_id": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.validate_concept_id", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.validate_concept_id", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'nouns': FieldInfo(annotation=Mapping[str, str], required=True), 'adjectives': FieldInfo(annotation=Sequence[str], required=True)}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdPartsEntry.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts", "kind": "class", "doc": "parts to create resource ids
\n", "bases": "bioimageio_collection_backoffice.common.Node"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.dataset": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.dataset", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.dataset", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.notebook": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.notebook", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.notebook", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.get_icon": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.get_icon", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.get_icon", "kind": "function", "doc": "\n", "signature": "(self, resource_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.select_type": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.select_type", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.select_type", "kind": "function", "doc": "\n", "signature": "(\tself,\ttype_: str) -> bioimageio_collection_backoffice.collection_config.id_parts.IdPartsEntry:", "funcdef": "def"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'model': FieldInfo(annotation=IdPartsEntry, required=True), 'dataset': FieldInfo(annotation=IdPartsEntry, required=True), 'notebook': FieldInfo(annotation=IdPartsEntry, required=True)}"}, "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.id_parts.IdParts.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.id_parts", "qualname": "IdParts.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.reviewers": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nhypha id
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.name": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.name", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.name", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.affiliation": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.affiliation", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.affiliation", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.orcid": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.orcid", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.orcid", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.github_user": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.github_user", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.github_user", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.email": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.email", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.email", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_config": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_config", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_fields", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'id': FieldInfo(annotation=str, required=True), 'name': FieldInfo(annotation=str, required=True), 'affiliation': FieldInfo(annotation=str, required=True), 'orcid': FieldInfo(annotation=str, required=True), 'github_user': FieldInfo(annotation=str, required=True), 'email': FieldInfo(annotation=str, required=True)}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewer.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewer.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_config.reviewers.Reviewers": {"fullname": "bioimageio_collection_backoffice.collection_config.reviewers.Reviewers", "modulename": "bioimageio_collection_backoffice.collection_config.reviewers", "qualname": "Reviewers", "kind": "variable", "doc": "\n", "default_value": "typing.Sequence[bioimageio_collection_backoffice.collection_config.reviewers.Reviewer]"}, "bioimageio_collection_backoffice.collection_json": {"fullname": "bioimageio_collection_backoffice.collection_json", "modulename": "bioimageio_collection_backoffice.collection_json", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.collection_json.Author": {"fullname": "bioimageio_collection_backoffice.collection_json.Author", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "Author", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\na summary of all collection records
\n", "bases": "bioimageio_collection_backoffice.collection_config.collection_json_template.CollectionJsonTemplate"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.collection": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.collection", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.collection", "kind": "variable", "doc": "\n", "annotation": ": Sequence[bioimageio_collection_backoffice.collection_json.CollectionEntry]"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.config": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.config", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_json.CollectionWebsiteConfig"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_config": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_config", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_fields": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_fields", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'authors': FieldInfo(annotation=Sequence[Author], required=True), 'cite': FieldInfo(annotation=Sequence[CiteEntry], required=True), 'config': FieldInfo(annotation=CollectionWebsiteConfig, required=True), 'description': FieldInfo(annotation=str, required=True), 'documentation': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'format_version': FieldInfo(annotation=Version, required=True), 'git_repo': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'icon': FieldInfo(annotation=Url, required=True, metadata=[UrlConstraints(max_length=2083, allowed_schemes=['http', 'https'], host_required=None, default_host=None, default_port=None, default_path=None)]), 'license': FieldInfo(annotation=LicenseId, required=True), 'name': FieldInfo(annotation=str, required=True), 'tags': FieldInfo(annotation=Sequence[str], required=True), 'type': FieldInfo(annotation=Literal['collection'], required=True), 'version': FieldInfo(annotation=Version, required=True), 'collection': FieldInfo(annotation=Sequence[CollectionEntry], required=True)}"}, "bioimageio_collection_backoffice.collection_json.CollectionJson.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.collection_json.CollectionJson.model_computed_fields", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "CollectionJson.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.collection_json.ConceptVersion": {"fullname": "bioimageio_collection_backoffice.collection_json.ConceptVersion", "modulename": "bioimageio_collection_backoffice.collection_json", "qualname": "ConceptVersion", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\npydantic models to describe the content of various files\nrelevant for the bioimage.io collection
\n"}, "bioimageio_collection_backoffice.db_structure.chat": {"fullname": "bioimageio_collection_backoffice.db_structure.chat", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "kind": "module", "doc": "<concept_id>/<version>/chat.json keeps a record of version specific comments
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\n<concept_id>/<version>/chat.json keeps a record of version specific comments
messages
\n", "annotation": ": Sequence[bioimageio_collection_backoffice.db_structure.chat.Message]"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.get_updated": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.get_updated", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.get_updated", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.chat.Chat) -> bioimageio_collection_backoffice.db_structure.chat.Chat:", "funcdef": "def"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'messages': FieldInfo(annotation=Sequence[Message], required=False, default_factory=list)}"}, "bioimageio_collection_backoffice.db_structure.chat.Chat.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.chat.Chat.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.chat", "qualname": "Chat.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.compatibility": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\ntoolname (including version)
\n", "annotation": ": Annotated[str, FieldInfo(annotation=NoneType, required=True, exclude=True)]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.status": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.status", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.status", "kind": "variable", "doc": "status of this tool for this resource
\n", "annotation": ": Literal['passed', 'failed', 'not-applicable']"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.error": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.error", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.error", "kind": "variable", "doc": "error message if status=='failed'
details to explain the status
status badge with a resource specific link to the tool
\n", "annotation": ": Optional[bioimageio_collection_backoffice.collection_json.Badge]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.links": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.links", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.links", "kind": "variable", "doc": "the checked resource should link these other bioimage.io resources
\n", "annotation": ": Sequence[str]"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'allow', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'tool': FieldInfo(annotation=str, required=True, exclude=True), 'status': FieldInfo(annotation=Literal['passed', 'failed', 'not-applicable'], required=True), 'error': FieldInfo(annotation=Union[str, NoneType], required=True), 'details': FieldInfo(annotation=Any, required=True), 'badge': FieldInfo(annotation=Union[Badge, NoneType], required=False, default=None), 'links': FieldInfo(annotation=Sequence[str], required=False, default=())}"}, "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "CompatiblityReport.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry": {"fullname": "bioimageio_collection_backoffice.db_structure.compatibility.TestSummaryEntry", "modulename": "bioimageio_collection_backoffice.db_structure.compatibility", "qualname": "TestSummaryEntry", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nlog message
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.details": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.details", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.details", "kind": "variable", "doc": "log details
\n", "annotation": ": Any"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.timestamp": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.timestamp", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.timestamp", "kind": "variable", "doc": "creation of log entry
\n", "annotation": ": datetime.datetime"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.run_url": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.run_url", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.run_url", "kind": "variable", "doc": "gh action run url
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'message': FieldInfo(annotation=str, required=False, default=''), 'details': FieldInfo(annotation=Any, required=False, default=None), 'timestamp': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'run_url': FieldInfo(annotation=Union[str, NoneType], required=False, default=None)}"}, "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.log.LogEntry.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "LogEntry.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.log.Log": {"fullname": "bioimageio_collection_backoffice.db_structure.log.Log", "modulename": "bioimageio_collection_backoffice.db_structure.log", "qualname": "Log", "kind": "class", "doc": "<concept_id>/<version>/log.json contains a version specific log
<concept_id>/<version>/reserved.json allows to reserve a concept id
<concept_id>/<version>/reserved.json allows to reserve a concept id
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nfollowing AcceptedStatus
Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\n<concept_id>/draft/draft.json contains the collection entry metadata
<concept_id>/info.json contains the collection entry metadata
version specific DOI
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.download_count": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.download_count", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.download_count", "kind": "variable", "doc": "\n", "annotation": ": Union[int, Literal['?']]"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.get_updated": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.get_updated", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.get_updated", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.RecordInfo) -> bioimageio_collection_backoffice.db_structure.version_info.RecordInfo:", "funcdef": "def"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'created': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'concept_doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'download_count': FieldInfo(annotation=Union[int, Literal['?']], required=False, default='?')}"}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "RecordInfo.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nversion specific DOI
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.v": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.v", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.v", "kind": "variable", "doc": "version
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_config": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_config", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_config", "kind": "variable", "doc": "\n", "default_value": "{'extra': 'ignore', 'frozen': True, 'populate_by_name': True, 'revalidate_instances': 'never', 'validate_assignment': True, 'validate_default': False}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_fields", "kind": "variable", "doc": "\n", "default_value": "{'created': FieldInfo(annotation=datetime, required=False, default_factory=builtin_function_or_method), 'doi': FieldInfo(annotation=Union[str, NoneType], required=False, default=None), 'v': FieldInfo(annotation=str, required=True)}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_computed_fields": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionInfo.model_computed_fields", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionInfo.model_computed_fields", "kind": "variable", "doc": "\n", "default_value": "{}"}, "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo": {"fullname": "bioimageio_collection_backoffice.db_structure.version_info.VersionsInfo", "modulename": "bioimageio_collection_backoffice.db_structure.version_info", "qualname": "VersionsInfo", "kind": "class", "doc": "Usage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nUsage docs: https://docs.pydantic.dev/2.8/concepts/models/
\n\nA base class for creating Pydantic models.
\n\nAttributes:\n __class_vars__: The names of classvars defined on the model.\n __private_attributes__: Metadata about the private attributes of the model.\n __signature__: The signature for instantiating the model.
\n\n__pydantic_complete__: Whether model building is completed, or if there are still undefined fields.\n__pydantic_core_schema__: The pydantic-core schema used to build the SchemaValidator and SchemaSerializer.\n__pydantic_custom_init__: Whether the model has a custom `__init__` function.\n__pydantic_decorators__: Metadata containing the decorators defined on the model.\n This replaces `Model.__validators__` and `Model.__root_validators__` from Pydantic V1.\n__pydantic_generic_metadata__: Metadata for generic models; contains data used for a similar purpose to\n __args__, __origin__, __parameters__ in typing-module generics. May eventually be replaced by these.\n__pydantic_parent_namespace__: Parent namespace of the model, used for automatic rebuilding of models.\n__pydantic_post_init__: The name of the post-init method for the model, if defined.\n__pydantic_root_model__: Whether the model is a `RootModel`.\n__pydantic_serializer__: The pydantic-core SchemaSerializer used to dump instances of the model.\n__pydantic_validator__: The pydantic-core SchemaValidator used to validate instances of the model.\n\n__pydantic_extra__: An instance attribute with the values of extra fields from validation when\n `model_config['extra'] == 'allow'`.\n__pydantic_fields_set__: An instance attribute with the names of fields explicitly set.\n__pydantic_private__: Instance attribute with the values of private attributes set on the model instance.\nClient to connect to remote storage
\n", "annotation": ": bioimageio_collection_backoffice.s3_client.Client"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.id": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.id", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.folder": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.folder", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.folder", "kind": "variable", "doc": "The S3 (sub)prefix of this resource
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.log.Log"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log_message": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log_message", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log_message", "kind": "function", "doc": "\n", "signature": "(self, message: str, details: Optional[Any] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_base.RemoteBase.log_error": {"fullname": "bioimageio_collection_backoffice.remote_base.RemoteBase.log_error", "modulename": "bioimageio_collection_backoffice.remote_base", "qualname": "RemoteBase.log_error", "kind": "function", "doc": "\n", "signature": "(self, error: Union[Exception, str], details: Optional[Any] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection": {"fullname": "bioimageio_collection_backoffice.remote_collection", "modulename": "bioimageio_collection_backoffice.remote_collection", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.yaml": {"fullname": "bioimageio_collection_backoffice.remote_collection.yaml", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "yaml", "kind": "variable", "doc": "\n", "default_value": "<ruyaml.main.YAML object>"}, "bioimageio_collection_backoffice.remote_collection.LEGACY_DOWNLOAD_COUNTS": {"fullname": "bioimageio_collection_backoffice.remote_collection.LEGACY_DOWNLOAD_COUNTS", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "LEGACY_DOWNLOAD_COUNTS", "kind": "variable", "doc": "\n", "default_value": "{'affable-shark': 70601, 'ambitious-ant': 5830, 'ambitious-sloth': 12735, 'amiable-crocodile': 2516, 'chatty-frog': 54555, 'conscientious-seashell': 33362, 'courteous-otter': 4519, 'creative-panda': 35927, 'determined-chipmunk': 18747, 'discreet-rooster': 42990, 'easy-going-sauropod': 12717, 'efficient-chipmunk': 3556, 'emotional-cricket': 36653, 'fearless-crab': 39638, 'hiding-blowfish': 41816, 'hiding-tiger': 45822, 'humorous-owl': 40313, 'impartial-shark': 20822, 'impartial-shrimp': 44942, 'independent-shrimp': 23638, 'joyful-deer': 19265, 'kind-seashell': 40486, 'laid-back-lobster': 25850, 'loyal-parrot': 37100, 'loyal-squid': 30836, 'modest-octopus': 8531, 'naked-microbe': 23086, 'nice-peacock': 13995, 'noisy-fish': 12501, 'noisy-hedgehog': 6793, 'non-judgemental-eagle': 36554, 'organized-badger': 39777, 'organized-cricket': 10156, 'passionate-t-rex': 24267, 'pioneering-rhino': 28176, 'placid-llama': 39063, 'polite-pig': 21235, 'powerful-chipmunk': 35455, 'powerful-fish': 31743, 'shivering-raccoon': 34761, 'straightforward-crocodile': 25477, 'thoughtful-turtle': 25874, 'wild-whale': 29530, 'willing-hedgehog': 37772}"}, "bioimageio_collection_backoffice.remote_collection.LEGACY_VERSIONS": {"fullname": "bioimageio_collection_backoffice.remote_collection.LEGACY_VERSIONS", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "LEGACY_VERSIONS", "kind": "variable", "doc": "\n", "default_value": "{'10.5281/zenodo.5764892': ['6647674', '6322939'], '10.5281/zenodo.6338614': ['6338615'], '10.5281/zenodo.5869899': ['6647688', '6321179', '5869900'], '10.5281/zenodo.5874741': ['5874742'], '10.5281/zenodo.5914248': ['8186255', '6514622', '6514446', '5914249'], '10.5281/zenodo.6406756': ['6811922', '6811498', '6406757'], '10.5281/zenodo.5874841': ['6630266', '5874842'], '10.5281/zenodo.5749843': ['5888237'], '10.5281/zenodo.6028097': ['6028098'], '10.5281/zenodo.6348084': ['6348085'], '10.5281/zenodo.7261974': ['7782776', '7778377', '7688940', '7546703', '7261975'], '10.5281/zenodo.6028280': ['6647695', '6028281'], '10.5281/zenodo.6200635': ['7702687', '6538890', '6200636'], '10.5281/zenodo.6346511': ['7768142', '7701413', '6346512'], '10.5281/zenodo.6348728': ['6348729'], '10.5281/zenodo.5817052': ['5906839', '5850574'], '10.5281/zenodo.5847355': ['6647683', '6322908'], '10.5281/zenodo.6406803': ['6406804'], '10.5281/zenodo.6200999': ['7690494', '7678300', '6538911', '6224243'], '10.5281/zenodo.6384845': ['7774490', '7701638', '6384846'], '10.5281/zenodo.6383429': ['7774505', '7701632', '6383430'], '10.5281/zenodo.6079314': ['7695872', '7689587', '7688686', '6385590', '6079315'], '10.5281/zenodo.6334383': ['7805067', '7701262', '7697068', '6346500', '6334384'], '10.5281/zenodo.6334881': ['7805026', '7701241', '7696907', '6346477', '6334882'], '10.5281/zenodo.6334777': ['7765026', '7701561', '7696952', '6346524', '6334778'], '10.5281/zenodo.5910854': ['6539073', '5911832'], '10.5281/zenodo.6334583': ['7805434', '7768223', '7701492', '7696919', '6346519', '6334584'], '10.5281/zenodo.6811491': ['6811492'], '10.5281/zenodo.6559474': ['6559475'], '10.5281/zenodo.5910163': ['5942853'], '10.5281/zenodo.6865412': ['6919253'], '10.5281/zenodo.7274275': ['8123818', '7274276'], '10.5281/zenodo.6808325': ['6808413'], '10.5281/zenodo.7315440': ['7315441'], '10.5281/zenodo.7380171': ['7405349'], '10.5281/zenodo.7614645': ['7642674'], '10.5281/zenodo.7772662': ['7781091'], '10.5281/zenodo.7786492': ['7786493'], '10.5281/zenodo.8421755': ['8432366'], '10.5281/zenodo.8064806': ['8073617'], '10.5281/zenodo.6559929': ['6559930'], '10.5281/zenodo.8419845': ['8420081'], '10.5281/zenodo.8420099': ['8420100'], '10.5281/zenodo.8401064': ['8429203', '8401065'], '10.5281/zenodo.8142283': ['8171247'], '10.5281/zenodo.7612115': ['7612152']}"}, "bioimageio_collection_backoffice.remote_collection.P": {"fullname": "bioimageio_collection_backoffice.remote_collection.P", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "P", "kind": "variable", "doc": "\n", "default_value": "~P"}, "bioimageio_collection_backoffice.remote_collection.log": {"fullname": "bioimageio_collection_backoffice.remote_collection.log", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "log", "kind": "function", "doc": "method decorator to indicate that a method execution should be logged
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.reviewer_role": {"fullname": "bioimageio_collection_backoffice.remote_collection.reviewer_role", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "reviewer_role", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, str, ~P], ~T]) -> Callable[Concatenate[~R, str, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.lock_concept": {"fullname": "bioimageio_collection_backoffice.remote_collection.lock_concept", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "lock_concept", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.lock_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.lock_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "lock_version", "kind": "function", "doc": "method decorator to indicate that a method may only be called by a bioimage.io reviewer
\n", "signature": "(\tfunc: Callable[Concatenate[~R, ~P], ~T]) -> Callable[Concatenate[~R, ~P], ~T]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection", "kind": "class", "doc": "A representation of a (the) bioimage.io collection
\n", "bases": "bioimageio_collection_backoffice.remote_base.RemoteBase"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.__init__", "kind": "function", "doc": "\n", "signature": "(client: bioimageio_collection_backoffice.s3_client.Client)"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.client": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.client", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.client", "kind": "variable", "doc": "Client to connect to remote storage
\n", "annotation": ": bioimageio_collection_backoffice.s3_client.Client"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.folder": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.folder", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.folder", "kind": "variable", "doc": "collection folder is given by the client prefix
collection.json url
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.config": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.config", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.config", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.collection_config.CollectionConfig"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.partner_ids": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.partner_ids", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.partner_ids", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_concepts": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_concepts", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_concepts", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.validate_concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.validate_concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.validate_concept_id", "kind": "function", "doc": "check if a concept id follows the defined pattern (not if it exists)
\n", "signature": "(self, concept_id: str, *, type_: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_concpet_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_concpet_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.generate_concpet_id", "kind": "function", "doc": "generate a new, unused concept id
\n", "signature": "(self, type_: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.reserve_concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.reserve_concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.reserve_concept_id", "kind": "function", "doc": "\n", "signature": "(self, concept_id: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_taken_concept_ids": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_taken_concept_ids", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_taken_concept_ids", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_drafts": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_drafts", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_drafts", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_published_versions": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.get_published_versions", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.get_published_versions", "kind": "function", "doc": "\n", "signature": "(self) -> List[bioimageio_collection_backoffice.remote_collection.Record]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"fullname": "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RemoteCollection.generate_collection_json", "kind": "function", "doc": "generate a json file with an overview of all published resources\n(also generates versions.json files for each research concept)
A representation of a bioimage.io resource\n(not a specific staged or published version of it)
\n", "bases": "bioimageio_collection_backoffice.remote_base.RemoteBase"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str)"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.collection": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.collection", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.collection", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.remote_collection.RemoteCollection"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.concept_id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.concept_id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.concept_id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.id", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.draft", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.remote_collection.RecordDraft"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.get_published_versions", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.get_published_versions", "kind": "function", "doc": "Get representations of the published version
\n", "signature": "(self) -> List[bioimageio_collection_backoffice.remote_collection.Record]:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft_new_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordConcept.draft_new_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordConcept.draft_new_version", "kind": "function", "doc": "Stage the content at package_url as a new resource version candidate.
(version unspecific) Zenodo concept DOI of the\nlatest published version of this resource concept
\n"}, "bioimageio_collection_backoffice.remote_collection.Uploader": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader", "kind": "class", "doc": "Uploader(email, name)
\n", "bases": "typing.NamedTuple"}, "bioimageio_collection_backoffice.remote_collection.Uploader.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.__init__", "kind": "function", "doc": "Create new instance of Uploader(email, name)
\n", "signature": "(email: ForwardRef('Optional[str]'), name: str)"}, "bioimageio_collection_backoffice.remote_collection.Uploader.email": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.email", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.email", "kind": "variable", "doc": "Alias for field number 0
\n", "annotation": ": Optional[str]"}, "bioimageio_collection_backoffice.remote_collection.Uploader.name": {"fullname": "bioimageio_collection_backoffice.remote_collection.Uploader.name", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Uploader.name", "kind": "variable", "doc": "Alias for field number 1
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordBase": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase", "kind": "class", "doc": "Base class for a RecordDraft and Record
rdf.yaml download URL
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.chat": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.chat", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.chat", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.chat.Chat"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.add_log_entry": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.add_log_entry", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.add_log_entry", "kind": "function", "doc": "add a log entry
\n", "signature": "(\tself,\tlog_entry: bioimageio_collection_backoffice.db_structure.log.LogEntry):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_log": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_log", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.extend_log", "kind": "function", "doc": "extend log file
\n", "signature": "(\tself,\textension: bioimageio_collection_backoffice.db_structure.log.Log):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_chat": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.extend_chat", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.extend_chat", "kind": "function", "doc": "extend chat file
\n", "signature": "(\tself,\textension: bioimageio_collection_backoffice.db_structure.chat.Chat):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_uploader": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_uploader", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_uploader", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_url", "kind": "function", "doc": "\n", "signature": "(self, path: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_urls": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_urls", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_urls", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_paths": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_file_paths", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_file_paths", "kind": "function", "doc": "\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.get_compatibility_report_path": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.get_compatibility_report_path", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.get_compatibility_report_path", "kind": "function", "doc": "\n", "signature": "(self, tool: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordBase.set_compatibility_report": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordBase.set_compatibility_report", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordBase.set_compatibility_report", "kind": "function", "doc": "\n", "signature": "(\tself,\treport: bioimageio_collection_backoffice.db_structure.compatibility.CompatiblityReport) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft", "kind": "class", "doc": "A staged resource version
\n", "bases": "RecordBase"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str)"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.version": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.version", "kind": "variable", "doc": "\n", "annotation": ": ClassVar[str]", "default_value": "'draft'"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.doi", "kind": "variable", "doc": "\n", "annotation": ": ClassVar[NoneType]", "default_value": "None"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.folder": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.folder", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.folder", "kind": "variable", "doc": "The S3 (sub)prefix of this version\n(sub)prefix, because the client may prefix this prefix
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.info": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.info", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.version_info.DraftInfo"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.update_info": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.update_info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.update_info", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.DraftInfo):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.bioimageio_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.bioimageio_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.bioimageio_url", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.concept_doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.concept_doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.concept_doi", "kind": "variable", "doc": "concept DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.unpack": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.unpack", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.unpack", "kind": "function", "doc": "\n", "signature": "(self, package_url: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.set_testing_status": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.set_testing_status", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.set_testing_status", "kind": "function", "doc": "\n", "signature": "(self, description: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.await_review": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.await_review", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.await_review", "kind": "function", "doc": "set status to 'awaiting review'
\n", "signature": "(self):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.request_changes": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.request_changes", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.request_changes", "kind": "function", "doc": "\n", "signature": "(self, reviewer: str, reason: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.RecordDraft.publish": {"fullname": "bioimageio_collection_backoffice.remote_collection.RecordDraft.publish", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "RecordDraft.publish", "kind": "function", "doc": "mark this staged version candidate as accepted and try to publish it
\n", "signature": "(\tself,\treviewer: str) -> bioimageio_collection_backoffice.remote_collection.Record:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record", "kind": "class", "doc": "A representation of a published resource version
\n", "bases": "RecordBase"}, "bioimageio_collection_backoffice.remote_collection.Record.__init__": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.__init__", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.__init__", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str,\tversion: str)"}, "bioimageio_collection_backoffice.remote_collection.Record.version": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.version", "kind": "variable", "doc": "a (semantic) version string
\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.Record.id": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.id", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.id", "kind": "variable", "doc": "\n", "annotation": ": str"}, "bioimageio_collection_backoffice.remote_collection.Record.doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.doi", "kind": "variable", "doc": "version specific DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.Record.concept_doi": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.concept_doi", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.concept_doi", "kind": "variable", "doc": "concept DOI of Zenodo record
\n"}, "bioimageio_collection_backoffice.remote_collection.Record.bioimageio_url": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.bioimageio_url", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.bioimageio_url", "kind": "variable", "doc": "\n"}, "bioimageio_collection_backoffice.remote_collection.Record.info": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.info", "kind": "variable", "doc": "\n", "annotation": ": bioimageio_collection_backoffice.db_structure.version_info.RecordInfo"}, "bioimageio_collection_backoffice.remote_collection.Record.update_info": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.update_info", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.update_info", "kind": "function", "doc": "\n", "signature": "(\tself,\tupdate: bioimageio_collection_backoffice.db_structure.version_info.RecordInfo):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.get_all_compatibility_reports": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.get_all_compatibility_reports", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.get_all_compatibility_reports", "kind": "function", "doc": "get all compatibility reports
\n", "signature": "(self, tool: Optional[str] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.Record.set_dois": {"fullname": "bioimageio_collection_backoffice.remote_collection.Record.set_dois", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "Record.set_dois", "kind": "function", "doc": "\n", "signature": "(self, *, doi: str, concept_doi: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.get_remote_resource_version": {"fullname": "bioimageio_collection_backoffice.remote_collection.get_remote_resource_version", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "get_remote_resource_version", "kind": "function", "doc": "\n", "signature": "(\tclient: bioimageio_collection_backoffice.s3_client.Client,\tconcept_id: str,\tversion: Union[int, float, str]):", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.maybe_swap_with_thumbnail": {"fullname": "bioimageio_collection_backoffice.remote_collection.maybe_swap_with_thumbnail", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "maybe_swap_with_thumbnail", "kind": "function", "doc": "\n", "signature": "(\tsrc: Union[Any, Dict[Any, Any], List[Any]],\tthumbnails: Mapping[str, str]) -> Any:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.resolve_relative_path": {"fullname": "bioimageio_collection_backoffice.remote_collection.resolve_relative_path", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "resolve_relative_path", "kind": "function", "doc": "\n", "signature": "(\tsrc: Union[Any, Dict[Any, Any], List[Any]],\tparsed_root: urllib.parse.SplitResult) -> Any:", "funcdef": "def"}, "bioimageio_collection_backoffice.remote_collection.create_collection_entries": {"fullname": "bioimageio_collection_backoffice.remote_collection.create_collection_entries", "modulename": "bioimageio_collection_backoffice.remote_collection", "qualname": "create_collection_entries", "kind": "function", "doc": "create collection entries from a single (draft) record
\n", "signature": "(\tversions: Sequence[Union[bioimageio_collection_backoffice.remote_collection.Record, bioimageio_collection_backoffice.remote_collection.RecordDraft]]) -> Tuple[List[bioimageio_collection_backoffice.collection_json.CollectionEntry], Mapping[str, bioimageio_collection_backoffice.id_map.IdInfo]]:", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils": {"fullname": "bioimageio_collection_backoffice.requests_utils", "modulename": "bioimageio_collection_backoffice.requests_utils", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely": {"fullname": "bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "raise_for_status_discretely", "kind": "function", "doc": "Raises HTTPError, if one occurred,\nbut removes query from url to avoid leaking access tokens, etc.
adapted from requests.Response.raise_for_status
\n", "signature": "(response: requests.models.Response):", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils.put_file_from_url": {"fullname": "bioimageio_collection_backoffice.requests_utils.put_file_from_url", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "put_file_from_url", "kind": "function", "doc": "Gets a remote file and pushes it up to a destination
\n", "signature": "(file_url: str, destination_url: str, params: Dict[str, Any]) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.requests_utils.put_file": {"fullname": "bioimageio_collection_backoffice.requests_utils.put_file", "modulename": "bioimageio_collection_backoffice.requests_utils", "qualname": "put_file", "kind": "function", "doc": "\n", "signature": "(file_object: _io.BytesIO, url: str, params: Dict[str, Any]):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.run_dynamic_tests.yaml": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.yaml", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "yaml", "kind": "variable", "doc": "\n", "default_value": "<ruyaml.main.YAML object>"}, "bioimageio_collection_backoffice.run_dynamic_tests.get_summary_detail_from_exception": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.get_summary_detail_from_exception", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "get_summary_detail_from_exception", "kind": "function", "doc": "\n", "signature": "(name: str, exception: Exception):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests.run_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.run_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "run_dynamic_tests", "kind": "function", "doc": "\n", "signature": "(\tstaged: bioimageio_collection_backoffice.remote_collection.RecordDraft,\tweight_format: Optional[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']],\tcreate_env_outcome: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.run_dynamic_tests.rerun_dynamic_tests": {"fullname": "bioimageio_collection_backoffice.run_dynamic_tests.rerun_dynamic_tests", "modulename": "bioimageio_collection_backoffice.run_dynamic_tests", "qualname": "rerun_dynamic_tests", "kind": "function", "doc": "\n", "signature": "(\tpublished: bioimageio_collection_backoffice.remote_collection.Record,\tweight_format: Optional[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']],\tcreate_env_outcome: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client": {"fullname": "bioimageio_collection_backoffice.s3_client", "modulename": "bioimageio_collection_backoffice.s3_client", "kind": "module", "doc": "\n"}, "bioimageio_collection_backoffice.s3_client.Client": {"fullname": "bioimageio_collection_backoffice.s3_client.Client", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client", "kind": "class", "doc": "Convenience wrapper around a Minio S3 client
S3 host
\n", "annotation": ": str", "default_value": "'uk1s3.embassy.ebi.ac.uk'"}, "bioimageio_collection_backoffice.s3_client.Client.bucket": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.bucket", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.bucket", "kind": "variable", "doc": "S3 bucket
\n", "annotation": ": str", "default_value": "'public-datasets'"}, "bioimageio_collection_backoffice.s3_client.Client.prefix": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.prefix", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.prefix", "kind": "variable", "doc": "S3 prefix ('root folder')
\n", "annotation": ": str", "default_value": "'testing.bioimage.io/runner/instance'"}, "bioimageio_collection_backoffice.s3_client.Client.access_key": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.access_key", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.access_key", "kind": "variable", "doc": "S3 access key
\n", "annotation": ": pydantic.types.SecretStr", "default_value": "SecretStr('')"}, "bioimageio_collection_backoffice.s3_client.Client.secret_key": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.secret_key", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.secret_key", "kind": "variable", "doc": "S3 secret key
\n", "annotation": ": pydantic.types.SecretStr", "default_value": "SecretStr('')"}, "bioimageio_collection_backoffice.s3_client.Client.max_bytes_cached": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.max_bytes_cached", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.max_bytes_cached", "kind": "variable", "doc": "\n", "annotation": ": int", "default_value": "1000000000"}, "bioimageio_collection_backoffice.s3_client.Client.put_and_cache": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_and_cache", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_and_cache", "kind": "function", "doc": "\n", "signature": "(self, path: str, file: bytes):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put", "kind": "function", "doc": "upload a file(like object)
\n", "signature": "(\tself,\tpath: str,\tfile_object: Union[_io.BytesIO, BinaryIO],\tlength: Optional[int]) -> None:", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_pydantic": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_pydantic", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_pydantic", "kind": "function", "doc": "convenience method to upload a json file from a pydantic model
\n", "signature": "(self, path: str, obj: pydantic.main.BaseModel):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_json": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_json", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_json", "kind": "function", "doc": "convenience method to upload a json file from a json serializable value
\n", "signature": "(self, path: str, json_value: Any):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.put_json_string": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.put_json_string", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.put_json_string", "kind": "function", "doc": "\n", "signature": "(self, path: str, json_str: str):", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.get_file_urls": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.get_file_urls", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.get_file_urls", "kind": "function", "doc": "Checks an S3 'folder' for its list of files
\n", "signature": "(self, path: str = '') -> List[str]:", "funcdef": "def"}, "bioimageio_collection_backoffice.s3_client.Client.ls": {"fullname": "bioimageio_collection_backoffice.s3_client.Client.ls", "modulename": "bioimageio_collection_backoffice.s3_client", "qualname": "Client.ls", "kind": "function", "doc": "List folder contents, non-recursive, ala ls but no \".\" or \"..\"
copy and delete all objects under src to tgt
remove all objects under prefix
Load file
\n\nReturns:\n file content or None if no object at path was found.
Get the full URL to path
update a conda env such that we have bioimageio.core and the collection backoffice available
\n", "signature": "(\tenv: bioimageio_collection_backoffice.validate_format.CondaEnv,\tenv_name: Optional[str] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_base_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_base_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_base_env", "kind": "function", "doc": "\n", "signature": "():", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_env_from_deps": {"fullname": "bioimageio_collection_backoffice.validate_format.get_env_from_deps", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_env_from_deps", "kind": "function", "doc": "\n", "signature": "(\tdeps: Union[bioimageio.spec.model.v0_4.Dependencies, bioimageio.spec.model.v0_5.EnvironmentFileDescr]) -> bioimageio_collection_backoffice.validate_format.CondaEnv:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_version_range": {"fullname": "bioimageio_collection_backoffice.validate_format.get_version_range", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_version_range", "kind": "function", "doc": "\n", "signature": "(v: bioimageio.spec._internal.version_type.Version) -> str:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_onnx_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_onnx_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_onnx_env", "kind": "function", "doc": "\n", "signature": "(*, opset_version: Optional[int]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_pytorch_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_pytorch_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_pytorch_env", "kind": "function", "doc": "\n", "signature": "(\t*,\tpytorch_version: Optional[bioimageio.spec._internal.version_type.Version] = None):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_tf_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_tf_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_tf_env", "kind": "function", "doc": "\n", "signature": "(\ttensorflow_version: Optional[bioimageio.spec._internal.version_type.Version]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.get_conda_env": {"fullname": "bioimageio_collection_backoffice.validate_format.get_conda_env", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "get_conda_env", "kind": "function", "doc": "\n", "signature": "(\t*,\tentry: Union[bioimageio.spec.model.v0_4.OnnxWeightsDescr, bioimageio.spec.model.v0_4.PytorchStateDictWeightsDescr, bioimageio.spec.model.v0_4.TensorflowSavedModelBundleWeightsDescr, bioimageio.spec.model.v0_4.TorchscriptWeightsDescr, bioimageio.spec.model.v0_5.OnnxWeightsDescr, bioimageio.spec.model.v0_5.PytorchStateDictWeightsDescr, bioimageio.spec.model.v0_5.TensorflowSavedModelBundleWeightsDescr, bioimageio.spec.model.v0_5.TorchscriptWeightsDescr],\tenv_name: str) -> bioimageio_collection_backoffice.validate_format.CondaEnv:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.ensure_valid_conda_env_name": {"fullname": "bioimageio_collection_backoffice.validate_format.ensure_valid_conda_env_name", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "ensure_valid_conda_env_name", "kind": "function", "doc": "\n", "signature": "(name: str) -> str:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.prepare_dynamic_test_cases": {"fullname": "bioimageio_collection_backoffice.validate_format.prepare_dynamic_test_cases", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "prepare_dynamic_test_cases", "kind": "function", "doc": "\n", "signature": "(\trd: Union[Annotated[Union[Annotated[Union[bioimageio.spec.application.v0_2.ApplicationDescr, bioimageio.spec.application.v0_3.ApplicationDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.dataset.v0_2.DatasetDescr, bioimageio.spec.dataset.v0_3.DatasetDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.model.v0_4.ModelDescr, bioimageio.spec.model.v0_5.ModelDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.notebook.v0_2.NotebookDescr, bioimageio.spec.notebook.v0_3.NotebookDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]], Discriminator(discriminator='type', custom_error_type=None, custom_error_message=None, custom_error_context=None)], Annotated[Union[bioimageio.spec.generic.v0_2.GenericDescr, bioimageio.spec.generic.v0_3.GenericDescr], Discriminator(discriminator='format_version', custom_error_type=None, custom_error_message=None, custom_error_context=None)]]) -> Tuple[List[Dict[Literal['weight_format'], Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript']]], Dict[Literal['keras_hdf5', 'onnx', 'pytorch_state_dict', 'tensorflow_js', 'tensorflow_saved_model_bundle', 'torchscript'], bioimageio_collection_backoffice.validate_format.CondaEnv]]:", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.validate_format": {"fullname": "bioimageio_collection_backoffice.validate_format.validate_format", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "validate_format", "kind": "function", "doc": "\n", "signature": "(\trv: Union[bioimageio_collection_backoffice.remote_collection.RecordDraft, bioimageio_collection_backoffice.remote_collection.Record]):", "funcdef": "def"}, "bioimageio_collection_backoffice.validate_format.validate_format_impl": {"fullname": "bioimageio_collection_backoffice.validate_format.validate_format_impl", "modulename": "bioimageio_collection_backoffice.validate_format", "qualname": "validate_format_impl", "kind": "function", "doc": "\n", "signature": "(rdf_source: str):", "funcdef": "def"}}, "docInfo": {"bioimageio_collection_backoffice": {"qualname": 0, "fullname": 3, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup": {"qualname": 0, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.yaml": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 8, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.SkipForNow": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 11}, "bioimageio_collection_backoffice.backup.backup": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 11}, "bioimageio_collection_backoffice.backup.backup_published_version": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 29, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.rdf_authors_to_metadata_creators": {"qualname": 5, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 700, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.rdf_to_metadata": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 782, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.backup.generate_related_identifiers_from_rdf": {"qualname": 5, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 713, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache": {"qualname": 0, "fullname": 4, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.Ks": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.CacheInfo": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 2, "doc": 8}, "bioimageio_collection_backoffice.cache.CacheInfo.__init__": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 44, "bases": 0, "doc": 12}, "bioimageio_collection_backoffice.cache.CacheInfo.hits": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.misses": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.maxsize": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.CacheInfo.currsize": {"qualname": 2, "fullname": 6, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 7}, "bioimageio_collection_backoffice.cache.UpdatetableLRU": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 4, "doc": 13}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.__init__": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 21, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.maxsize": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.cache_info": {"qualname": 3, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.update": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 85, "bases": 0, "doc": 17}, "bioimageio_collection_backoffice.cache.UpdatetableLRU.pop": {"qualname": 2, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 31, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.cache.SizedValueLRU": {"qualname": 1, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 8, "doc": 21}, "bioimageio_collection_backoffice.collection_config": {"qualname": 0, "fullname": 5, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig": {"qualname": 1, "fullname": 6, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 277}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.collection_template": {"qualname": 3, "fullname": 8, "annotation": 10, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.id_parts": {"qualname": 3, "fullname": 8, "annotation": 9, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.reviewers": {"qualname": 2, "fullname": 7, "annotation": 8, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.partners": {"qualname": 2, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.load": {"qualname": 2, "fullname": 7, "annotation": 0, "default_value": 0, "signature": 11, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_config": {"qualname": 3, "fullname": 8, "annotation": 0, "default_value": 40, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_fields": {"qualname": 3, "fullname": 8, "annotation": 0, "default_value": 31, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.CollectionConfig.model_computed_fields": {"qualname": 4, "fullname": 9, "annotation": 0, "default_value": 1, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template": {"qualname": 0, "fullname": 8, "annotation": 0, "default_value": 0, "signature": 0, "bases": 0, "doc": 8}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner": {"qualname": 1, "fullname": 9, "annotation": 0, "default_value": 0, "signature": 0, "bases": 5, "doc": 277}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.background_image": {"qualname": 3, "fullname": 11, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.default_type": {"qualname": 3, "fullname": 11, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.explore_button_text": {"qualname": 4, "fullname": 12, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.id": {"qualname": 2, "fullname": 10, "annotation": 2, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.icon": {"qualname": 2, "fullname": 10, "annotation": 33, "default_value": 0, "signature": 0, "bases": 0, "doc": 3}, "bioimageio_collection_backoffice.collection_config.collection_json_template.Partner.logo": {"qualname": 2, "fullname": 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"bioimageio_collection_backoffice.db_structure.reserved.Reserved": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.DraftInfo": {"tf": 1}, "bioimageio_collection_backoffice.db_structure.version_info.RecordInfo": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.url": {"tf": 1}, "bioimageio_collection_backoffice.remote_collection.RemoteCollection.generate_collection_json": {"tf": 1.4142135623730951}, "bioimageio_collection_backoffice.s3_client.Client.put_pydantic": {"tf": 1}, "bioimageio_collection_backoffice.s3_client.Client.put_json": {"tf": 1.4142135623730951}}, "df": 11}}}}, "q": {"docs": {}, "df": 0, "u": {"docs": {}, "df": 0, "e": {"docs": {}, "df": 0, "r": {"docs": {}, "df": 0, "y": {"docs": {"bioimageio_collection_backoffice.requests_utils.raise_for_status_discretely": {"tf": 1}}, "df": 1}}}}}}}}, "pipeline": ["trimmer"], "_isPrebuiltIndex": true}; // mirrored in build-search-index.js (part 1) // Also split on html tags. this is a cheap heuristic, but good enough.