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Possibly change in some web API #2

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tillea opened this issue Jan 4, 2021 · 0 comments
Open

Possibly change in some web API #2

tillea opened this issue Jan 4, 2021 · 0 comments

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@tillea
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tillea commented Jan 4, 2021

Hi,
I'm suspecting some web service might have changed its API which leads to the bug reported against the Debian package. Here is a summary of the output:

PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ...........
1..1
ok 1 - Bio/DB/EMBL.pm loaded ok
ok
t/author-mojibake.t ...... skipped: these tests are for testing by the author
t/author-pod-coverage.t .. skipped: these tests are for testing by the author
t/author-pod-syntax.t .... skipped: these tests are for testing by the author

------------- EXCEPTION -------------
MSG: EMBL stream with no ID. Not embl in my book
STACK Bio::SeqIO::embl::next_seq /usr/share/perl5/Bio/SeqIO/embl.pm:205
STACK Bio::DB::WebDBSeqI::get_Seq_by_acc /usr/share/perl5/Bio/DB/WebDBSeqI.pm:202
STACK toplevel t/EMBL.t:27
-------------------------------------

# Looks like your test exited with 255 just after 2.
t/EMBL.t .................
1..16
ok 1 - use Bio::DB::EMBL;
ok 2
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 14/16 subtests

Test Summary Report
-------------------
t/EMBL.t               (Wstat: 65280 Tests: 2 Failed: 0)
  Non-zero exit status: 255
  Parse errors: Bad plan.  You planned 16 tests but ran 2.
Files=5, Tests=3,  1 wallclock secs ( 0.02 usr  0.00 sys +  0.29 cusr  0.02 csys =  0.33 CPU)
Result: FAIL
Failed 1/5 test programs. 0/3 subtests failed.

Kind regards, Andreas.

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