diff --git a/truvari/consistency_report.py b/truvari/consistency_report.py index 9a6d3baa..fb24fad1 100644 --- a/truvari/consistency_report.py +++ b/truvari/consistency_report.py @@ -92,7 +92,7 @@ def create_file_intersections(allVCFs): def parse_args(args): """ parse args """ - parser = argparse.ArgumentParser(prog="consistency_report", description=__doc__, + parser = argparse.ArgumentParser(prog="consistency", description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) parser.add_argument("allVCFs", metavar='VCFs', nargs='+', help="VCFs to intersect") diff --git a/truvari/segmentation.py b/truvari/segmentation.py index e8c88a0b..d61af988 100644 --- a/truvari/segmentation.py +++ b/truvari/segmentation.py @@ -16,7 +16,7 @@ def parse_args(args): """ Pull the command line parameters """ - parser = argparse.ArgumentParser(prog="vcf2df", description=__doc__, + parser = argparse.ArgumentParser(prog="segment", description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) parser.add_argument("vcf", metavar="IN",