From c28fa4ff2727e2f14699692c6557bb689fd57aca Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Fran=C3=A7ois=20Gindraud?= <francois.gindraud@inria.fr>
Date: Thu, 6 Jun 2024 08:10:54 +0200
Subject: [PATCH] kissplice 2.6.7 (#1699)

Fixes bug with symlinked bin entrypoint.
---
 Formula/kissplice.rb | 14 ++++++--------
 1 file changed, 6 insertions(+), 8 deletions(-)

diff --git a/Formula/kissplice.rb b/Formula/kissplice.rb
index 6d8e05050..159541014 100644
--- a/Formula/kissplice.rb
+++ b/Formula/kissplice.rb
@@ -2,9 +2,8 @@ class Kissplice < Formula
   # cite Sacomoto_2012: https://doi.org/10.1186/1471-2105-13-S6-S5
   desc "Local transcriptome assembler for SNPs, indels and AS events"
   homepage "https://kissplice.prabi.fr"
-  url "https://gitlab.inria.fr/erable/kissplice.git",
-      tag:      "2.6.5",
-      revision: "00cb99c3b1971866089ef0439526647d328115d0"
+  url "https://gitlab.inria.fr/erable/kissplice/-/archive/2.6.7/kissplice-2.6.7.tar.gz"
+  sha256 "1904ffb3620a1073c5026915d19ec5fe21b9f23001995e4e1d906a64a817efe8"
   license "CECILL-2.0"
 
   bottle do
@@ -41,13 +40,12 @@ def install
   end
 
   test do
-    resource "git" do
-      url "https://gitlab.inria.fr/erable/kissplice.git",
-          tag:      "2.6.5",
-          revision: "00cb99c3b1971866089ef0439526647d328115d0"
+    resource "data" do
+      url "https://gitlab.inria.fr/erable/kissplice/-/archive/2.6.7/kissplice-2.6.7.tar.gz"
+      sha256 "1904ffb3620a1073c5026915d19ec5fe21b9f23001995e4e1d906a64a817efe8"
     end
 
-    resource("git").stage do
+    resource("data").stage do
       # Run sample example from the git data
       system "#{bin}/kissplice",
         "-r", "sample_example/mock1.fq", "-r", "sample_example/mock2.fq",