diff --git a/.github/workflows/chart_update_on_merge.yml b/.github/workflows/chart_update_on_merge.yml
index a2b14f2ec65..a17dd971436 100644
--- a/.github/workflows/chart_update_on_merge.yml
+++ b/.github/workflows/chart_update_on_merge.yml
@@ -60,7 +60,7 @@ jobs:
       run: |
         set -e
         cd cromwell
-        sbt -Dproject.isSnapshot=false -Dproject.isRelease=false dockerBuildAndPush
+        sbt -Dproject.isSnapshot=false dockerBuildAndPush
     - name: Deploy to dev and board release train (Cromwell)
       uses: broadinstitute/repository-dispatch@master
       with:
diff --git a/.github/workflows/docker_build_test.yml b/.github/workflows/docker_build_test.yml
index 01c2ea502c9..b4d373f330e 100644
--- a/.github/workflows/docker_build_test.yml
+++ b/.github/workflows/docker_build_test.yml
@@ -34,4 +34,10 @@ jobs:
         run: |
           set -e
           cd cromwell
-          sbt -Dproject.isSnapshot=false -Dproject.isRelease=false docker
+          sbt -Dproject.isSnapshot=false docker
+      # Rarely used but we really want it always working for emergencies
+      - name: Build Cromwell Debug Docker
+        run: |
+          set -e
+          cd cromwell
+          sbt -Dproject.isDebug=true docker
diff --git a/.github/workflows/trivy.yml b/.github/workflows/trivy.yml
index b005da65041..d353eae4e58 100644
--- a/.github/workflows/trivy.yml
+++ b/.github/workflows/trivy.yml
@@ -12,7 +12,6 @@ jobs:
         project:
         - cromiam
         - cromwell-drs-localizer
-        - perf
         - server
         - womtool
 
diff --git a/build.sbt b/build.sbt
index a3029d0ab09..8e480907c5e 100644
--- a/build.sbt
+++ b/build.sbt
@@ -387,11 +387,6 @@ lazy val `cloud-nio-impl-drs` = (project in cloudNio / "cloud-nio-impl-drs")
   .dependsOn(common)
   .dependsOn(common % "test->test")
 
-lazy val perf = project
-  .withExecutableSettings("perf", dependencies = perfDependencies, pushDocker = false)
-  .dependsOn(common)
-  .dependsOn(common % "test->test")
-
 lazy val `cromwell-drs-localizer` = project
   .withExecutableSettings("cromwell-drs-localizer", drsLocalizerDependencies, drsLocalizerSettings)
   .dependsOn(`cloud-nio-impl-drs`)
@@ -453,7 +448,6 @@ lazy val root = (project in file("."))
   .aggregate(googleBatch)
   .aggregate(httpFileSystem)
   .aggregate(languageFactoryCore)
-  .aggregate(perf)
   .aggregate(server)
   .aggregate(services)
   .aggregate(sfsBackend)
diff --git a/docs/developers/Building.md b/docs/developers/Building.md
index 5c5cc21eaf7..08ffe7a3ddd 100644
--- a/docs/developers/Building.md
+++ b/docs/developers/Building.md
@@ -8,13 +8,6 @@ features or fixes, the following are required to build Cromwell from source:
 * [AdoptOpenJDK 11 HotSpot](https://adoptopenjdk.net/)
 * [Git](https://git-scm.com/)
 
-You can also use the [development image](https://github.com/broadinstitute/cromwell/tree/develop/scripts/docker-develop), and build a development container to work inside:
-
-```bash
-$ docker build -t cromwell-dev .
-$ docker run -it cromwell-dev bash
-```
-
 First start by cloning the Cromwell repository from GitHub:
 
 ```bash
@@ -35,15 +28,15 @@ Finally build the Cromwell jar:
 $ sbt assembly
 ```
 
-NOTE: This command will run for a long time the first time.  
-NOTE: Compiling will not succeed on directories encrypted with ecryptfs (ubuntu encrypted home dirs for example), due to long file paths.
-
 `sbt assembly` will build the runnable Cromwell JAR in `server/target/scala-2.13/` with a name like `cromwell-<VERSION>.jar`. It will also build a runnable Womtool JAR in `womtool/target/scala-2.13/` with a name like `womtool-<VERSION>.jar`.
 
-To build a [Docker](https://www.docker.com/) image, run:
+## Docker
 
-```bash
-$ sbt server/docker
-```
+The following Docker build configurations are supported. Most users will want Snapshot, resulting in an image like `broadinstitute/cromwell:<VERSION>-SNAP`.
 
-This will build and tag a Docker image with a name like `broadinstitute/cromwell:<VERSION>-SNAP`.
+| Command                                        | Build Type | Debug Tools | Description                          |
+|------------------------------------------------|------------|-------------|--------------------------------------|
+| `sbt server/docker`                            | Snapshot   | No          | Most common local build              |
+| `sbt -Dproject.isDebug=true server/docker`     | Debug      | Yes         | Local build with debugging/profiling |
+| `sbt -Dproject.isSnapshot=false server/docker` | Standard   | No          | Reserved for CI: commit on `develop` |
+| `sbt -Dproject.isRelease=true server/docker`   | Release    | No          | Reserved for CI: numbered release    |
diff --git a/perf/src/main/resources/logback.xml b/perf/src/main/resources/logback.xml
deleted file mode 100644
index 8a90f3ba0ab..00000000000
--- a/perf/src/main/resources/logback.xml
+++ /dev/null
@@ -1,29 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<configuration>
-
-    <appender name="STDOUT" class="ch.qos.logback.core.ConsoleAppender" target="System.out">
-        <filter class="ch.qos.logback.classic.filter.LevelFilter">
-            <level>INFO</level>
-            <onMatch>ACCEPT</onMatch>
-            <onMismatch>DENY</onMismatch>
-        </filter>
-        <encoder>
-            <pattern>%msg%n</pattern>
-        </encoder>
-    </appender>
-
-    <appender name="STDERR" class="ch.qos.logback.core.ConsoleAppender" target="System.err">
-        <filter class="ch.qos.logback.classic.filter.ThresholdFilter">
-            <level>ERROR</level>
-        </filter>
-        <encoder>
-            <pattern>%red(%msg%n)</pattern>
-        </encoder>
-    </appender>
-
-    <root level="INFO">
-        <appender-ref ref="STDOUT" />
-        <appender-ref ref="STDERR" />
-    </root>
-
-</configuration>
diff --git a/perf/src/main/scala/cromwell/perf/Call.scala b/perf/src/main/scala/cromwell/perf/Call.scala
deleted file mode 100644
index b8e91589126..00000000000
--- a/perf/src/main/scala/cromwell/perf/Call.scala
+++ /dev/null
@@ -1,90 +0,0 @@
-package cromwell.perf
-
-import java.time.{Duration, OffsetDateTime}
-
-import io.circe.JsonObject
-
-case class CallCaching(hit: Option[Boolean],
-                       result: Option[String],
-                       hitFailures: Option[Seq[Map[String, Seq[JsonObject]]]]
-)
-
-case class ExecutionEvents(startTime: OffsetDateTime, description: String, endTime: OffsetDateTime)
-
-case class Call(shardIndex: Int,
-                start: OffsetDateTime,
-                end: OffsetDateTime,
-                callCaching: Option[CallCaching],
-                executionEvents: Seq[ExecutionEvents]
-) {
-  val callCachingEventStates =
-    List("CheckingCallCache", "FetchingCachedOutputsFromDatabase", "BackendIsCopyingCachedOutputs")
-  val jobPreparationEventStates =
-    List("Pending", "RequestingExecutionToken", "WaitingForValueStore", "PreparingJob", "CheckingJobStore")
-  val cacheCopyingEventStates = List("FetchingCachedOutputsFromDatabase", "BackendIsCopyingCachedOutputs")
-
-  /**
-    * @return Cache copy retries before getting a successful hit or running the job
-    */
-  val cacheCopyRetries: Int = {
-    val numFailures: Option[Int] = for {
-      cachingObject <- callCaching
-      failuresMap <- cachingObject.hitFailures
-    } yield failuresMap.size
-
-    numFailures.getOrElse(0)
-  }
-
-  /***
-    * @return Time (in Duration) job spent in just CheckingCallCache state
-    */
-  val timeInCheckingCallCacheState: Duration = {
-    val eventsRelatedToCC = executionEvents.collect {
-      case event if event.description.equalsIgnoreCase("CheckingCallCache") =>
-        Duration.between(event.startTime, event.endTime)
-    }
-
-    if (eventsRelatedToCC.nonEmpty) eventsRelatedToCC.reduce(_ plus _) else Duration.ZERO
-  }
-
-  /**
-    * @return Time (in Duration) job spent in Call Caching states
-    */
-  val timeInCallCachingState: Duration = {
-    val eventsRelatedToCC =
-      executionEvents.filter(event => callCachingEventStates.exists(state => state.equalsIgnoreCase(event.description)))
-
-    if (eventsRelatedToCC.nonEmpty) {
-      val eventsSortedByStartTime = eventsRelatedToCC.sortBy(_.startTime)
-      Duration.between(eventsSortedByStartTime.head.startTime, eventsSortedByStartTime.last.endTime)
-    } else Duration.ZERO
-  }
-
-  /**
-    * @return Time (in Duration) job spent in job preparation state i.e time between job submission and running it
-    *         (this doesn't consider the time it spent in call caching states
-    */
-  val timeInJobPreparation: Duration = {
-    val durationOfEventsInPreparationState = executionEvents.collect {
-      case event if jobPreparationEventStates.exists(_.equalsIgnoreCase(event.description)) =>
-        Duration.between(event.startTime, event.endTime)
-    }
-
-    if (durationOfEventsInPreparationState.nonEmpty) durationOfEventsInPreparationState.reduce(_ plus _)
-    else Duration.ZERO
-  }
-
-  /**
-    *
-    * @return Time (in Duration) job spent in fetching and copying cache hit(s)
-    */
-  val timeForFetchingAndCopyingCacheHit: Duration = {
-    val durationOfEventsInCacheCopyingState = executionEvents.collect {
-      case event if cacheCopyingEventStates.exists(_.equalsIgnoreCase(event.description)) =>
-        Duration.between(event.startTime, event.endTime)
-    }
-
-    if (durationOfEventsInCacheCopyingState.nonEmpty) durationOfEventsInCacheCopyingState.reduce(_ plus _)
-    else Duration.ZERO
-  }
-}
diff --git a/perf/src/main/scala/cromwell/perf/CompareMetadata.scala b/perf/src/main/scala/cromwell/perf/CompareMetadata.scala
deleted file mode 100644
index 64e49d93807..00000000000
--- a/perf/src/main/scala/cromwell/perf/CompareMetadata.scala
+++ /dev/null
@@ -1,153 +0,0 @@
-package cromwell.perf
-
-import java.io.FileInputStream
-import java.time.{Duration, OffsetDateTime}
-
-import better.files.File
-import cats.data.Validated.{Invalid, Valid}
-import cats.syntax.all._
-import cats.instances.list._
-import com.google.auth.oauth2.GoogleCredentials
-import com.google.cloud.storage.StorageOptions
-import com.typesafe.scalalogging.StrictLogging
-import common.validation.ErrorOr._
-import io.circe._
-import io.circe.generic.semiauto._
-import io.circe.parser._
-
-object CompareMetadata extends App with StrictLogging {
-  private val REGRESSION_CONST = 1.1
-
-  // If removed, IntelliJ (Oct '18) thinks the import isn't used.
-  // Later the compiler fails to find a decoder for OffsetDateTime.
-  lazy val anchorOffsetDateTime: Decoder[OffsetDateTime] = implicitly
-  implicit lazy val decodeCall: Decoder[Call] = deriveDecoder
-  implicit lazy val decodeCallCaching: Decoder[CallCaching] = deriveDecoder
-  implicit lazy val decodeExecutionEvents: Decoder[ExecutionEvents] = deriveDecoder
-  implicit lazy val decodeMetadata: Decoder[Metadata] = deriveDecoder
-
-  def parseMetadataFromLocalFile(filePath: String): Either[Error, Metadata] = {
-    val metadataFile = File(filePath)
-    val metadataFileContent = metadataFile.contentAsString
-
-    decode[Metadata](metadataFileContent)
-  }
-
-  def parseMetadataFromGcsFile(gcsUrl: String, pathToServiceAccount: String): Either[Error, Metadata] = {
-    val gcsUrlArray = gcsUrl.replace("gs://", "").split("/", 2)
-    val Array(gcsBucket, fileToBeLocalized) = gcsUrlArray
-
-    val credentials = GoogleCredentials.fromStream(new FileInputStream(pathToServiceAccount))
-    val storage = StorageOptions.newBuilder().setCredentials(credentials).build().getService
-    val blob = storage.get(gcsBucket, fileToBeLocalized)
-    val metadataFileContent = blob.getContent().map(_.toChar).mkString
-
-    decode[Metadata](metadataFileContent)
-  }
-
-  def parseMetadata(inputFile: String, pathToServiceAccount: String): Either[Error, Metadata] =
-    if (inputFile.startsWith("gs://"))
-      parseMetadataFromGcsFile(inputFile, pathToServiceAccount)
-    else parseMetadataFromLocalFile(inputFile)
-
-  def displayComputedMetrics(metadata: Metadata, displayMsg: String): Unit = {
-    logger.info(displayMsg)
-
-    logger.info(s"Workflow started after: ${metadata.workflowStartedAfter}")
-    logger.info(s"Workflow Running time: ${metadata.workflowRunningTime}")
-    logger.info(s"Total jobs per root workflow: ${metadata.totalJobsPerRootWf}")
-    logger.info(s"Avg cache copy retries: ${metadata.avgCacheRetries}")
-    logger.info(s"Avg time job spent in Call Caching state: ${metadata.avgTimeInCallCachingState}")
-    logger.info(s"Avg time job spent in just CheckingCallCache state: ${metadata.avgTimeInCheckingCallCacheState}")
-    logger.info(s"Avg time job spent in Job Preparation state: ${metadata.avgTimeInJobPreparation}")
-    logger.info(
-      s"Avg time job spent in fetching and copying cache hit(s) state: ${metadata.avgTimeForFetchingAndCopyingCacheHit}"
-    )
-  }
-
-  /***
-    * Compares the metrics in Metadata which have type 'Duration' (mostly the ones related to time metrics)
-    */
-  def compareDurationMetrics(metadataOld: Metadata,
-                             metadataNew: Metadata,
-                             metricFunc: Metadata => Duration,
-                             metricName: String
-  ): ErrorOr[String] =
-    if (metricFunc(metadataNew).toMillis > REGRESSION_CONST * metricFunc(metadataOld).toMillis) {
-      (s"$metricName of new metadata is greater than 10% of old metadata. " +
-        s"New metric value: ${metricFunc(metadataNew)}. " +
-        s"Old metric value: ${metricFunc(metadataOld)}.").invalidNel[String]
-    } else s"$metricName hasn't regressed yet".valid
-
-  /***
-    * Compares the metrics in Metadata which have type 'Int' (mostly the ones related to size metrics)
-    */
-  def compareIntMetrics(metadataOld: Metadata,
-                        metadataNew: Metadata,
-                        metricFunc: Metadata => Int,
-                        metricName: String
-  ): ErrorOr[String] =
-    if (metricFunc(metadataNew) > REGRESSION_CONST * metricFunc(metadataOld)) {
-      (s"$metricName of new metadata is greater than 10% of old metadata. " +
-        s"New metric value: ${metricFunc(metadataNew)}. " +
-        s"Old metric value: ${metricFunc(metadataOld)}.").invalidNel[String]
-    } else s"$metricName hasn't regressed yet".valid
-
-  def compareMetadataMetrics(metadataOld: Metadata, metadataNew: Metadata): ErrorOr[List[String]] = {
-    val durationFuncList: List[(Metadata => Duration, String)] = List(
-      (_.workflowStartedAfter, "workflowStartedAfter"),
-      (_.workflowRunningTime, "workflowRunningTime"),
-      (_.avgTimeInCallCachingState, "avgTimeInCallCachingState"),
-      (_.avgTimeInCheckingCallCacheState, "avgTimeInCheckingCallCacheState"),
-      (_.avgTimeInJobPreparation, "avgTimeInJobPreparation"),
-      (_.avgTimeForFetchingAndCopyingCacheHit, "avgTimeForFetchingAndCopyingCacheHit")
-    )
-
-    val intFuncList: List[(Metadata => Int, String)] =
-      List((_.totalJobsPerRootWf, "totalJobsPerRootWf"), (_.avgCacheRetries, "avgCacheRetries"))
-
-    val durationMetricsComp = durationFuncList.map(x => compareDurationMetrics(metadataOld, metadataNew, x._1, x._2))
-    val intMetricsComp = intFuncList.map(x => compareIntMetrics(metadataOld, metadataNew, x._1, x._2))
-    (durationMetricsComp ::: intMetricsComp).sequence[ErrorOr, String]
-  }
-
-  def printParseErrorToConsoleAndExit(metadataFile: String, error: Error, systemExit: Boolean): Unit = {
-    logger.error(s"Something went wrong while parsing $metadataFile. Error: ${error.getLocalizedMessage}")
-    if (systemExit) System.exit(1)
-  }
-
-  def generateAndCompareMetrics(metadataOldEither: Either[Error, Metadata],
-                                metadataNewEither: Either[Error, Metadata]
-  ): Unit =
-    (metadataOldEither, metadataNewEither) match {
-      case (Right(metadataOld), Right(metadataNew)) =>
-        val metadataOldMsg = s"Metrics for metadata generated from ${args(0)}"
-        val metadataNewMsg = s"\nMetrics for metadata generated from ${args(1)}"
-        displayComputedMetrics(metadataOld, metadataOldMsg)
-        displayComputedMetrics(metadataNew, metadataNewMsg)
-        compareMetadataMetrics(metadataOld, metadataNew) match {
-          case Valid(_) => logger.info("\nYAY!! Metrics from new metadata json haven't regressed!")
-          case Invalid(listOfErrors) =>
-            logger.error("\nBelow metadata metrics have regressed:")
-            logger.error(listOfErrors.toList.mkString("\n"))
-            System.exit(1)
-        }
-      case (Right(_), Left(e)) => printParseErrorToConsoleAndExit(args(1), e, systemExit = true)
-      case (Left(e), Right(_)) => printParseErrorToConsoleAndExit(args(0), e, systemExit = true)
-      case (Left(e1), Left(e2)) =>
-        printParseErrorToConsoleAndExit(args(0), e1, systemExit = false)
-        printParseErrorToConsoleAndExit(args(1), e2, systemExit = true)
-    }
-
-  args.length match {
-    case 2 =>
-      if (args(0).startsWith("gs://") || args(1).startsWith("gs://")) {
-        logger.error("Path to service account is needed to download GCS file. Please pass it as 3rd argument.")
-        System.exit(1)
-      } else generateAndCompareMetrics(parseMetadataFromLocalFile(args(0)), parseMetadataFromLocalFile(args(1)))
-    case 3 => generateAndCompareMetrics(parseMetadata(args(0), args(2)), parseMetadata(args(1), args(2)))
-    case _ =>
-      logger.error("Please pass in 2 file paths!")
-      System.exit(1)
-  }
-}
diff --git a/perf/src/main/scala/cromwell/perf/Metadata.scala b/perf/src/main/scala/cromwell/perf/Metadata.scala
deleted file mode 100644
index b61e88c795a..00000000000
--- a/perf/src/main/scala/cromwell/perf/Metadata.scala
+++ /dev/null
@@ -1,74 +0,0 @@
-package cromwell.perf
-
-import java.time.{Duration, OffsetDateTime}
-
-case class Metadata(id: String,
-                    workflowName: String,
-                    submission: OffsetDateTime,
-                    start: OffsetDateTime,
-                    end: OffsetDateTime,
-                    status: String,
-                    calls: Option[Map[String, Seq[Call]]]
-) {
-
-  private def addInt(x: Int, y: Int): Int = x + y
-
-  private def addDuration(x: Duration, y: Duration): Duration = x.plus(y)
-
-  private def sumElementsInOptionSeq[A](listOption: Option[Iterable[A]], op: (A, A) => A, default: A): A =
-    listOption match {
-      case Some(list) => list.reduce[A]((a, b) => op(a, b))
-      case None => default
-    }
-
-  /**
-    * @return Time between the submission and start of workflow
-    */
-  val workflowStartedAfter: Duration = Duration.between(submission, start)
-
-  val workflowRunningTime: Duration = Duration.between(start, end)
-
-  val totalJobsPerRootWf: Int =
-    sumElementsInOptionSeq(calls.map(taskMap => taskMap.map(callsPerTask => callsPerTask._2.size)), addInt, 0)
-
-  val avgCacheRetries: Int =
-    if (totalJobsPerRootWf > 0) {
-      val cacheRetriesList =
-        calls.map(taskMap => taskMap.flatMap(callsPerTask => callsPerTask._2.map(call => call.cacheCopyRetries)))
-      sumElementsInOptionSeq(cacheRetriesList, addInt, 0) / totalJobsPerRootWf
-    } else 0
-
-  val avgTimeInCallCachingState: Duration =
-    if (totalJobsPerRootWf > 0) {
-      val timeInCallCachingStateList =
-        calls.map(taskMap => taskMap.flatMap(callsPerTask => callsPerTask._2.map(call => call.timeInCallCachingState)))
-      sumElementsInOptionSeq(timeInCallCachingStateList, addDuration, Duration.ZERO).dividedBy(
-        totalJobsPerRootWf.toLong
-      )
-    } else Duration.ZERO
-
-  val avgTimeInCheckingCallCacheState: Duration =
-    if (totalJobsPerRootWf > 0) {
-      val timeInCheckingCallCacheStateList = calls.map(taskMap =>
-        taskMap.flatMap(callsPerTask => callsPerTask._2.map(call => call.timeInCheckingCallCacheState))
-      )
-      sumElementsInOptionSeq(timeInCheckingCallCacheStateList, addDuration, Duration.ZERO).dividedBy(
-        totalJobsPerRootWf.toLong
-      )
-    } else Duration.ZERO
-
-  val avgTimeInJobPreparation: Duration =
-    if (totalJobsPerRootWf > 0) {
-      val timeInJobPreparationList =
-        calls.map(taskMap => taskMap.flatMap(callsPerTask => callsPerTask._2.map(call => call.timeInJobPreparation)))
-      sumElementsInOptionSeq(timeInJobPreparationList, addDuration, Duration.ZERO).dividedBy(totalJobsPerRootWf.toLong)
-    } else Duration.ZERO
-
-  val avgTimeForFetchingAndCopyingCacheHit: Duration =
-    if (totalJobsPerRootWf > 0) {
-      val timeInCopyingList = calls.map(taskMap =>
-        taskMap.flatMap(callsPerTask => callsPerTask._2.map(call => call.timeForFetchingAndCopyingCacheHit))
-      )
-      sumElementsInOptionSeq(timeInCopyingList, addDuration, Duration.ZERO).dividedBy(totalJobsPerRootWf.toLong)
-    } else Duration.ZERO
-}
diff --git a/project/Dependencies.scala b/project/Dependencies.scala
index 8a12d0e0cc2..fc9beae1f12 100644
--- a/project/Dependencies.scala
+++ b/project/Dependencies.scala
@@ -643,9 +643,6 @@ object Dependencies {
   // Version of the swagger UI to write into config files
   val swaggerUiVersion: String = swaggerUiV
 
-  val perfDependencies: List[ModuleID] = circeDependencies ++ betterFilesDependencies ++ commonDependencies ++
-    googleApiClientDependencies ++ googleCloudDependencies
-
   val drsLocalizerDependencies: List[ModuleID] = List(
     "com.google.auth" % "google-auth-library-oauth2-http" % googleOauth2V,
     "com.google.cloud" % "google-cloud-storage" % googleCloudStorageV,
@@ -675,7 +672,6 @@ object Dependencies {
       implDrsDependencies ++
       implFtpDependencies ++
       languageFactoryDependencies ++
-      perfDependencies ++
       serverDependencies ++
       sfsBackendDependencies ++
       spiDependencies ++
diff --git a/project/Publishing.scala b/project/Publishing.scala
index 6dd1b281700..4abc5cc3258 100644
--- a/project/Publishing.scala
+++ b/project/Publishing.scala
@@ -1,4 +1,4 @@
-import Version.cromwellVersion
+import Version.{Debug, Release, Snapshot, Standard, cromwellVersion}
 import org.apache.ivy.Ivy
 import org.apache.ivy.core.IvyPatternHelper
 import org.apache.ivy.core.module.descriptor.{DefaultModuleDescriptor, MDArtifact}
@@ -36,20 +36,26 @@ object Publishing {
       ArrayBuffer(broadinstitute/cromwell:dev, broadinstitute/cromwell:develop)
      */
     dockerTags := {
-      val versionsCsv = if (Version.isSnapshot) {
-        // Tag looks like `85-443a6fc-SNAP`
-        version.value
-      } else {
-        if (Version.isRelease) {
-          // Tags look like `85`, `85-443a6fc`
-          s"$cromwellVersion,${version.value}"
-        } else {
-          // Tag looks like `85-443a6fc`, `latest`
-          s"${version.value},latest"
-        }
+      val tags = Version.buildType match {
+        case Snapshot =>
+          // Ordinary local build
+          // Looks like `85-443a6fc-SNAP`
+          Seq(version.value)
+        case Release =>
+          // Looks like `85`, `85-443a6fc`
+          Seq(cromwellVersion, version.value)
+        case Debug =>
+          // Ordinary local build with debug stuff
+          // Looks like `85-443a6fc-DEBUG`
+          Seq(version.value)
+        case Standard =>
+          // Merge to `develop`
+          // Looks like `85-443a6fc`, `latest`, `develop`
+          // TODO: once we automate releases, `latest` should move to `Release`
+          Seq(version.value, "latest", "develop")
       }
 
-      // Travis applies (as of 10/22) the `dev` and `develop` tags on merge to `develop`
+      val versionsCsv = tags.mkString(",")
       sys.env.getOrElse("CROMWELL_SBT_DOCKER_TAGS", versionsCsv).split(",")
     },
     docker / imageNames := dockerTags.value map { tag =>
@@ -68,6 +74,11 @@ object Publishing {
         add(artifact, artifactTargetPath)
         runRaw(s"ln -s $artifactTargetPath /app/$projectName.jar")
 
+        // Extra tools in debug mode only
+        if (Version.buildType == Debug) {
+          addInstruction(installDebugFacilities)
+        }
+
         /*
         If you use the 'exec' form for an entry point, shell processing is not performed and
         environment variable substitution does not occur.  Thus we have to /bin/bash here
@@ -116,6 +127,44 @@ object Publishing {
     )
   )
 
+  /**
+    * Install packages needed for debugging when shelled in to a running image.
+    *
+    * This includes:
+    * - The JDK, which includes tools like `jstack` not present in the JRE
+    * - The YourKit Java Profiler
+    * - Various Linux system & development utilities
+    *
+    * @return Instruction to run in the build
+    */
+  def installDebugFacilities: Instruction = {
+    import sbtdocker.Instructions
+
+    // It is optimal to use a single `Run` instruction to minimize the number of layers in the image.
+    // Do not be tempted to install the default JDK in the repositories, it's from Oracle.
+    //
+    // Documentation:
+    // - https://www.yourkit.com/docs/java-profiler/2024.3/help/docker_broker.jsp#setup
+    // - https://adoptium.net/installation/linux/#_deb_installation_on_debian_or_ubuntu
+    Instructions.Run(
+      """apt-get update -qq && \
+        |apt-get install -qq --no-install-recommends file gpg htop jq less nload unzip vim && \
+        |wget -qO - https://packages.adoptium.net/artifactory/api/gpg/key/public | gpg --dearmor | \
+        |  tee /etc/apt/trusted.gpg.d/adoptium.gpg > /dev/null && \
+        |echo "deb https://packages.adoptium.net/artifactory/deb $(awk -F= '/^VERSION_CODENAME/{print$2}' /etc/os-release) main" | \
+        |  tee /etc/apt/sources.list.d/adoptium.list && \
+        |apt-get update -qq && \
+        |apt-get install -qq temurin-11-jdk && \
+        |rm -rf /var/lib/apt/lists/* && \
+        |wget -q https://www.yourkit.com/download/docker/YourKit-JavaProfiler-2024.3-docker.zip -P /tmp/docker-build-cache/ && \
+        |unzip /tmp/docker-build-cache/YourKit-JavaProfiler-2024.3-docker.zip -d /tmp/docker-build-cache && \
+        |mkdir -p /usr/local/YourKit-JavaProfiler-2024.3/bin/ && \
+        |cp -R /tmp/docker-build-cache/YourKit-JavaProfiler-2024.3/bin/linux-x86-64/ /usr/local/YourKit-JavaProfiler-2024.3/bin/linux-x86-64/ && \
+        |rm -rf /tmp/docker-build-cache
+        |""".stripMargin
+    )
+  }
+
   def dockerPushSettings(pushEnabled: Boolean): Seq[Setting[_]] =
     if (pushEnabled) {
       List(
diff --git a/project/Version.scala b/project/Version.scala
index e530e54e62e..26b0057eb10 100644
--- a/project/Version.scala
+++ b/project/Version.scala
@@ -8,24 +8,44 @@ object Version {
   // Upcoming release, or current if we're on a master / hotfix branch
   val cromwellVersion = "87"
 
+  sealed trait BuildType
+  case object Snapshot extends BuildType
+  case object Debug extends BuildType
+  case object Release extends BuildType
+  case object Standard extends BuildType
+
+  def buildType: BuildType = {
+    if (isDebug) Debug
+    else if (isRelease) Release
+    else if (isSnapshot) Snapshot
+    else Standard
+  }
+
   /**
     * Returns true if this project should be considered a snapshot.
     *
     * The value is read in directly from the system property `project.isSnapshot` as there were confusing issues with
     * the multi-project and sbt.Keys#isSnapshot().
     *
-    * Default `true`.
+    * This is the default if no arguments are provided.
     */
-  val isSnapshot: Boolean = sys.props.get("project.isSnapshot").forall(_.toBoolean)
+  private lazy val isSnapshot: Boolean = getPropOrDefault("project.isSnapshot", default = true)
 
   /**
-    * Returns `true` if this project should tag a release like `85` in addition to a hash like `85-443a6fc`.
-    *
-    * Has no effect when `isSnapshot` is `true`.
+    * Returns true if this project should be built in the debugging configuration.
     *
-    * Default `true`.
+    * Note that this image is much larger than the default build!
     */
-  val isRelease: Boolean = sys.props.get("project.isRelease").forall(_.toBoolean)
+  private lazy val isDebug: Boolean = getPropOrDefault("project.isDebug")
+
+  /**
+    * Returns `true` if this project should tag a release like `85` in addition to a hash like `85-443a6fc`.
+    */
+  private lazy val isRelease: Boolean = getPropOrDefault("project.isRelease")
+
+  private def getPropOrDefault(prop: String, default: Boolean = false): Boolean = {
+    sys.props.get(prop).map(_.toBoolean).getOrElse(default)
+  }
 
   // Adapted from SbtGit.versionWithGit
   def cromwellVersionWithGit: Seq[Setting[_]] =
@@ -90,6 +110,11 @@ object Version {
     val version = overrideVersion orElse commitVersion getOrElse unknownVersion
 
     // For now, obfuscate SNAPSHOTs from sbt's developers: https://github.com/sbt/sbt/issues/2687#issuecomment-236586241
-    if (isSnapshot) s"$version-SNAP" else version
+    // (by calling it `SNAP` instead of `SNAPSHOT`)
+    buildType match {
+      case Snapshot => s"$version-SNAP"
+      case Debug => s"$version-DEBUG"
+      case _ => version
+    }
   }
 }
diff --git a/scripts/perf/clone_database/clone_database.sh b/scripts/perf/clone_database/clone_database.sh
deleted file mode 100755
index 99240996ff4..00000000000
--- a/scripts/perf/clone_database/clone_database.sh
+++ /dev/null
@@ -1,21 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-mkdir -p mnt
-
-# Read the DB password from vault:
-DB_PASS=$(read_path_from_vault_json "secret/dsp/cromwell/perf" '.data.db_pass')
-
-# Read the service account credentials from vault:
-read_service_account_from_vault
-
-# Clone the CloudSQL DB
-# Note: Cloning the same database in parallel doesn't work.
-# By doing it here we can run the jenkins jobs sequentially and ensure the database is cloned once at a time as well
-SQL_OPERATION=$(gcloud_run_as_service_account "perf_sql_create_gcloud_${BUILD_NUMBER}" "gcloud --project broad-dsde-cromwell-perf sql instances clone --async ${CLOUD_SQL_INSTANCE_TO_CLONE} ${CLOUD_SQL_INSTANCE_NEW_NAME} --format='value(name)'" )
-
-gcloud_run_as_service_account "perf_sql_await_gcloud_${BUILD_NUMBER}" "gcloud beta sql operations wait --timeout=900 --project broad-dsde-cromwell-perf ${SQL_OPERATION}"
-
-gcloud_run_as_service_account "perf_sql_user_gcloud_${BUILD_NUMBER}" "gcloud --project broad-dsde-cromwell-perf sql users create cromwell --instance=${CLOUD_SQL_INSTANCE_NEW_NAME} --password=${DB_PASS}"
diff --git a/scripts/perf/delete_database/delete_database.sh b/scripts/perf/delete_database/delete_database.sh
deleted file mode 100755
index a393cac5eb2..00000000000
--- a/scripts/perf/delete_database/delete_database.sh
+++ /dev/null
@@ -1,15 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-mkdir -p mnt
-
-# Read the service account credentials from vault:
-read_service_account_from_vault
-
-gcloud_run_as_service_account "perf_sql_delete_gcloud_${BUILD_NUMBER}" " \
-  gcloud \
-      --verbosity info \
-      --project broad-dsde-cromwell-perf \
-      sql instances delete ${CLOUD_SQL_INSTANCE} -q"
diff --git a/scripts/perf/delete_horicromtal/delete_horicromtal.sh b/scripts/perf/delete_horicromtal/delete_horicromtal.sh
deleted file mode 100755
index 807b9c239b0..00000000000
--- a/scripts/perf/delete_horicromtal/delete_horicromtal.sh
+++ /dev/null
@@ -1,16 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-mkdir -p mnt
-
-# Read the service account credentials from vault:
-read_service_account_from_vault
-
-for instance in runner101 runner102 reader101
-do
-    gcloud_delete_instance \
-        "perf_delete_gcloud_instance_${BUILD_NUMBER}-${instance}" \
-        "${CROMWELL_INSTANCE_NAME}-${instance}"
-done
diff --git a/scripts/perf/delete_instance/delete_instance.sh b/scripts/perf/delete_instance/delete_instance.sh
deleted file mode 100755
index 29d40ce7fb6..00000000000
--- a/scripts/perf/delete_instance/delete_instance.sh
+++ /dev/null
@@ -1,15 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-mkdir -p mnt
-
-# Read the service account credentials from vault:
-read_service_account_from_vault
-
-gcloud_run_as_service_account "perf_delete_gcloud_instance_${BUILD_NUMBER}" " \
-  gcloud \
-    --verbosity info \
-    --project broad-dsde-cromwell-perf \
-    compute instances delete ${CROMWELL_INSTANCE_NAME} --zone=us-central1-c -q"
diff --git a/scripts/perf/deploy_horicromtal/deploy_horicromtal.sh b/scripts/perf/deploy_horicromtal/deploy_horicromtal.sh
deleted file mode 100755
index 6d060996b77..00000000000
--- a/scripts/perf/deploy_horicromtal/deploy_horicromtal.sh
+++ /dev/null
@@ -1,90 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-DB_PASS=$(read_path_from_vault_json "secret/dsp/cromwell/perf" '.data.db_pass')
-
-read_service_account_from_vault
-
-runner_metadata=(
-  "BUILD_NUMBER=$BUILD_NUMBER"
-  "BUILD_TAG=$BUILD_TAG"
-  "CLEAN_UP=false"
-  "CLOUD_SQL_INSTANCE=$CLOUD_SQL_INSTANCE"
-  "CROMWELL_DB_USER=cromwell"
-  "CROMWELL_DB_PASS=$DB_PASS"
-  "CROMWELL_DOCKER_IMAGE=$CROMWELL_DOCKER_IMAGE"
-  "CROMWELL_PROJECT=broad-dsde-cromwell-perf"
-  "CROMWELL_BUCKET=${CROMWELL_EXECUTION_BUCKET}"
-  "CROMWELL_STATSD_HOST=10.128.0.4"
-  "CROMWELL_STATSD_PORT=8125"
-  "CROMWELL_PERF_SCRIPTS_BRANCH=${REPO_BRANCH}"
-  "GCS_REPORT_PATH=${GCS_REPORT_PATH}"
-  "GCS_REPORT_BUCKET=${GCS_REPORT_BUCKET}"
-  "TEST_CASE_DIRECTORY=${TEST_CASE_DIRECTORY}"
-  "CONFIG_OVERRIDE"="-Dservices.MetadataService.config.metadata-summary-refresh-interval = \"Inf\""
-)
-
-reader_metadata=(
-  "BUILD_NUMBER=$BUILD_NUMBER"
-  "BUILD_TAG=$BUILD_TAG"
-  "CLEAN_UP=false"
-  "CLOUD_SQL_INSTANCE=$CLOUD_SQL_INSTANCE"
-  "CROMWELL_DB_USER=cromwell"
-  "CROMWELL_DB_PASS=$DB_PASS"
-  "CROMWELL_DOCKER_IMAGE=$CROMWELL_DOCKER_IMAGE"
-  "CROMWELL_PROJECT=broad-dsde-cromwell-perf"
-  "CROMWELL_BUCKET=${CROMWELL_EXECUTION_BUCKET}"
-  "CROMWELL_STATSD_HOST=10.128.0.4"
-  "CROMWELL_STATSD_PORT=8125"
-  "CROMWELL_PERF_SCRIPTS_BRANCH=${REPO_BRANCH}"
-  "GCS_REPORT_PATH=${GCS_REPORT_PATH}"
-  "GCS_REPORT_BUCKET=${GCS_REPORT_BUCKET}"
-  "TEST_CASE_DIRECTORY=reader"
-  "CONFIG_OVERRIDE"=""
-)
-
-cp scripts/perf/deploy_instance/run_on_instance.sh mnt/
-
-gcloud_deploy_instance \
-  "perf_deploy_instance_${BUILD_NUMBER}-runner101" \
-   "${CROMWELL_INSTANCE_NAME}-runner101" \
-    "${INSTANCE_TEMPLATE}" \
-     "$(join ${runner_metadata[@]})" | tee runner1.txt
-
-gcloud_deploy_instance \
-  "perf_deploy_instance_${BUILD_NUMBER}-runner102" \
-   "${CROMWELL_INSTANCE_NAME}-runner102" \
-   "${INSTANCE_TEMPLATE}" \
-   "$(join ${runner_metadata[@]})" | tee runner2.txt
-
-# Note: The reader_metadata currently allows the default summarizer to continue running...
-# ... that's fine as long as there's only one reader, but if we add more, we should make the "summarizer" a separate VM.
-
-gcloud_deploy_instance \
-  "perf_deploy_instance_${BUILD_NUMBER}-reader101" \
-   "${CROMWELL_INSTANCE_NAME}-reader101" \
-   "${INSTANCE_TEMPLATE}" \
-   "$(join ${reader_metadata[@]})" | tee reader1.txt
-
-typeset RUNNER_UNDER_TEST_1=$(cat runner1.txt | tail -n1 | awk '{print $5}')
-typeset RUNNER_UNDER_TEST_2=$(cat runner2.txt | tail -n1 | awk '{print $5}')
-
-typeset READER_UNDER_TEST_1=$(cat reader1.txt | tail -n1 | awk '{print $5}')
-typeset CROMWELL_VALUE_TO_RETURN=$(cat reader1.txt | tail -n1 | awk "{print \$${FIELD_NO_TO_RETURN}}" )
-
-if test -z "${RUNNER_UNDER_TEST_1}" -o -z "${RUNNER_UNDER_TEST_2}" -o -z "${READER_UNDER_TEST_1}"
-then
-  echo "One of RUNNER_UNDER_TEST_1 or RUNNER_UNDER_TEST_2 or READER_UNDER_TEST_1 are empty ('${RUNNER_UNDER_TEST_1}', '${RUNNER_UNDER_TEST_2}, ${READER_UNDER_TEST_1}')"
-  exit 1
-else
-  echo "Determined that RUNNER_UNDER_TEST_1=${RUNNER_UNDER_TEST_1}, RUNNER_UNDER_TEST_2=${RUNNER_UNDER_TEST_2}, READER_UNDER_TEST_1=${READER_UNDER_TEST_1}"
-fi
-
-custom_wait_for_cromwell "${RUNNER_UNDER_TEST_1}"
-custom_wait_for_cromwell "${RUNNER_UNDER_TEST_2}"
-custom_wait_for_cromwell "${READER_UNDER_TEST_1}"
-
-mkdir -p output
-echo "CROMWELL_UNDER_TEST=${CROMWELL_VALUE_TO_RETURN}" > output/cromwell.properties
diff --git a/scripts/perf/deploy_horicromtal/run_on_instance.sh b/scripts/perf/deploy_horicromtal/run_on_instance.sh
deleted file mode 100644
index c9420a68ae3..00000000000
--- a/scripts/perf/deploy_horicromtal/run_on_instance.sh
+++ /dev/null
@@ -1,78 +0,0 @@
-#! /bin/bash
-
-set -x
-
-### /!\ This script assumes docker and docker compose are already installed on the host
-
-# Utility function to extract values from instance metadata
-extract_metadata() {
-  curl "http://metadata.google.internal/computeMetadata/v1/instance/attributes/$1" -H "Metadata-Flavor: Google"
-}
-
-# Exports an env var and also adds it to the root bashrc. This way if there is a need to ssh onto the machine
-# for debugging one will have the env variables already set when using root
-addVar() {
-  export $1
-  echo "export $1" >> /root/.bashrc
-}
-
-# Make sure ip forwarding is enabled by default so that docker doesn't lose connectivity
-echo "net.ipv4.ip_forward = 1" > /etc/sysctl.conf
-
-# Set up env variables
-addVar CROMWELL_BRANCH=$(extract_metadata CROMWELL_PERF_SCRIPTS_BRANCH)
-addVar CLOUD_SQL_DB_USER=$(extract_metadata CROMWELL_DB_USER)
-addVar CLOUD_SQL_DB_PASSWORD=$(extract_metadata CROMWELL_DB_PASS)
-addVar CLOUD_SQL_INSTANCE=$(extract_metadata CLOUD_SQL_INSTANCE)
-addVar CROMWELL_DOCKER_IMAGE=$(extract_metadata CROMWELL_DOCKER_IMAGE)
-addVar CROMWELL_PROJECT=$(extract_metadata CROMWELL_PROJECT)
-addVar CROMWELL_EXECUTION_ROOT=$(extract_metadata CROMWELL_BUCKET)
-addVar CROMWELL_STATSD_HOST=$(extract_metadata CROMWELL_STATSD_HOST)
-addVar CROMWELL_STATSD_PORT=$(extract_metadata CROMWELL_STATSD_PORT)
-addVar BUILD_ID=$(extract_metadata BUILD_TAG)
-addVar GCS_REPORT_BUCKET=$(extract_metadata GCS_REPORT_BUCKET)
-addVar GCS_REPORT_PATH=$(extract_metadata GCS_REPORT_PATH)
-addVar TEST_CASE_DIRECTORY=$(extract_metadata TEST_CASE_DIRECTORY)
-addVar CONFIG_OVERRIDE=$(extract_metadata CONFIG_OVERRIDE)
-
-# Use the instance name as statsd prefix to avoid metrics collisions
-addVar CROMWELL_STATSD_PREFIX=${BUILD_ID}
-
-addVar CROMWELL_ROOT=/app
-addVar PERF_ROOT=${CROMWELL_ROOT}/scripts/perf
-addVar TEST_WORKFLOW_ROOT=${PERF_ROOT}/test_cases
-
-# Clone cromwell to get the perf scripts. Use https to avoid ssh fingerprint prompt when the script runs
-git clone -b ${CROMWELL_BRANCH} --depth 1 --single-branch https://github.com/broadinstitute/cromwell.git ${CROMWELL_ROOT}
-
-source ${PERF_ROOT}/helper.inc.sh
-
-if [ -f "${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY}/cromwell.conf" ]
-then
-    echo "Using ${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY} as the Cromwell configuration directory"
-    addVar CROMWELL_CONF_DIR="${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY}"
-
-    # Also copy the default one next to it so we can include it
-    cp ${PERF_ROOT}/vm_scripts/cromwell/cromwell.conf ${CROMWELL_CONF_DIR}/cromwell_default.conf
-else
-    echo "Using ${PERF_ROOT}/vm_scripts/cromwell as the Cromwell configuration directory"
-    addVar CROMWELL_CONF_DIR="${PERF_ROOT}/vm_scripts/cromwell"
-fi
-
-if test -n "${CONFIG_OVERRIDE}"
-then
-    echo "${CONFIG_OVERRIDE}" >> "${CROMWELL_CONF_DIR}/cromwell.conf"
-fi
-
-addVar REPORT_URL="$(strip_trailing_slash "gs://${GCS_REPORT_BUCKET}/${GCS_REPORT_PATH}")"
-
-# Start cromwell and cloud sql proxy
-prepare_statsd_proxy
-docker-compose -f ${PERF_ROOT}/vm_scripts/docker-compose.yml up -d
-
-# Intermittently upload Cromwell logs to the bucket
-while true
-do
-    export_cromwell_logs
-    sleep 60
-done
diff --git a/scripts/perf/deploy_instance/deploy_instance.sh b/scripts/perf/deploy_instance/deploy_instance.sh
deleted file mode 100755
index c1775b8d4b0..00000000000
--- a/scripts/perf/deploy_instance/deploy_instance.sh
+++ /dev/null
@@ -1,59 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-DB_PASS=$(read_path_from_vault_json "secret/dsp/cromwell/perf" '.data.db_pass')
-
-read_service_account_from_vault
-	
-function join() { local IFS=","; echo "$*"; }
-
-metadata=(
-  "BUILD_NUMBER=$BUILD_NUMBER"
-  "BUILD_TAG=$BUILD_TAG"
-  "CLEAN_UP=false"
-  "CLOUD_SQL_INSTANCE=$CLOUD_SQL_INSTANCE"
-  "CROMWELL_DB_USER=cromwell"
-  "CROMWELL_DB_PASS=$DB_PASS"
-  "CROMWELL_DOCKER_IMAGE=$CROMWELL_DOCKER_IMAGE"
-  "CROMWELL_PROJECT=broad-dsde-cromwell-perf"
-  "CROMWELL_BUCKET=${CROMWELL_EXECUTION_BUCKET}"
-  "CROMWELL_STATSD_HOST=10.128.0.4"
-  "CROMWELL_STATSD_PORT=8125"
-  "CROMWELL_PERF_SCRIPTS_BRANCH=${REPO_BRANCH}"
-  "GCS_REPORT_PATH=${GCS_REPORT_PATH}"
-  "GCS_REPORT_BUCKET=${GCS_REPORT_BUCKET}"
-  "TEST_CASE_DIRECTORY=${TEST_CASE_DIRECTORY}"
-)
-
-cp scripts/perf/deploy_instance/run_on_instance.sh mnt/
-
-gcloud_run_as_service_account "perf_deploy_instance_${BUILD_NUMBER}" \
-  "gcloud \
-    --verbosity info \
-    --project broad-dsde-cromwell-perf \
-    compute \
-    instances \
-    create ${CROMWELL_INSTANCE_NAME} \
-    --zone us-central1-c \
-    --source-instance-template $INSTANCE_TEMPLATE \
-    --metadata-from-file startup-script=$DOCKER_ETC_PATH/run_on_instance.sh \
-    --metadata \
-        $(join ${metadata[@]})" | tee dockerResult.txt
-
-typeset CROMWELL_UNDER_TEST=$(cat dockerResult.txt | tail -n1 | awk '{print $5}' )
-typeset CROMWELL_VALUE_TO_RETURN=$(cat dockerResult.txt | tail -n1 | awk "{print \$${FIELD_NO_TO_RETURN}}" )
-
-if test -z "CROMWELL_UNDER_TEST" -o -z "CROMWELL_VALUE_TO_RETURN"
-then
-  echo "One of CROMWELL_UNDER_TEST or CROMWELL_VALUE_TO_RETURN are empty ('${CROMWELL_UNDER_TEST}', '${CROMWELL_VALUE_TO_RETURN}')"
-  exit 1
-else
-  echo "Determined that CROMWELL_UNDER_TEST=${CROMWELL_UNDER_TEST}, CROMWELL_VALUE_TO_RETURN=${CROMWELL_VALUE_TO_RETURN}"
-fi
-
-custom_wait_for_cromwell "${CROMWELL_UNDER_TEST}"
-
-mkdir -p output
-echo "CROMWELL_UNDER_TEST=${CROMWELL_VALUE_TO_RETURN}" > output/cromwell.properties
diff --git a/scripts/perf/deploy_instance/run_on_instance.sh b/scripts/perf/deploy_instance/run_on_instance.sh
deleted file mode 100644
index 3c5d1e85ed4..00000000000
--- a/scripts/perf/deploy_instance/run_on_instance.sh
+++ /dev/null
@@ -1,72 +0,0 @@
-#! /bin/bash
-
-set -x
-
-### /!\ This script assumes docker and docker compose are already installed on the host
-
-# Utility function to extract values from instance metadata
-extract_metadata() {
-  curl "http://metadata.google.internal/computeMetadata/v1/instance/attributes/$1" -H "Metadata-Flavor: Google"
-}
-
-# Exports an env var and also adds it to the root bashrc. This way if there is a need to ssh onto the machine
-# for debugging one will have the env variables already set when using root
-addVar() {
-  export $1
-  echo "export $1" >> /root/.bashrc
-}
-
-# Make sure ip forwarding is enabled by default so that docker doesn't lose connectivity
-echo "net.ipv4.ip_forward = 1" > /etc/sysctl.conf
-
-# Set up env variables
-addVar CROMWELL_BRANCH=$(extract_metadata CROMWELL_PERF_SCRIPTS_BRANCH)
-addVar CLOUD_SQL_DB_USER=$(extract_metadata CROMWELL_DB_USER)
-addVar CLOUD_SQL_DB_PASSWORD=$(extract_metadata CROMWELL_DB_PASS)
-addVar CLOUD_SQL_INSTANCE=$(extract_metadata CLOUD_SQL_INSTANCE)
-addVar CROMWELL_DOCKER_IMAGE=$(extract_metadata CROMWELL_DOCKER_IMAGE)
-addVar CROMWELL_PROJECT=$(extract_metadata CROMWELL_PROJECT)
-addVar CROMWELL_EXECUTION_ROOT=$(extract_metadata CROMWELL_BUCKET)
-addVar CROMWELL_STATSD_HOST=$(extract_metadata CROMWELL_STATSD_HOST)
-addVar CROMWELL_STATSD_PORT=$(extract_metadata CROMWELL_STATSD_PORT)
-addVar BUILD_ID=$(extract_metadata BUILD_TAG)
-addVar GCS_REPORT_BUCKET=$(extract_metadata GCS_REPORT_BUCKET)
-addVar GCS_REPORT_PATH=$(extract_metadata GCS_REPORT_PATH)
-addVar TEST_CASE_DIRECTORY=$(extract_metadata TEST_CASE_DIRECTORY)
-
-# Use the instance name as statsd prefix to avoid metrics collisions
-addVar CROMWELL_STATSD_PREFIX=${BUILD_ID}
-
-addVar CROMWELL_ROOT=/app
-addVar PERF_ROOT=${CROMWELL_ROOT}/scripts/perf
-addVar TEST_WORKFLOW_ROOT=${PERF_ROOT}/test_cases
-
-# Clone cromwell to get the perf scripts. Use https to avoid ssh fingerprint prompt when the script runs
-git clone -b ${CROMWELL_BRANCH} --depth 1 --single-branch https://github.com/broadinstitute/cromwell.git ${CROMWELL_ROOT}
-
-source ${PERF_ROOT}/helper.inc.sh
-
-if [ -f "${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY}/cromwell.conf" ]
-then
-    echo "Using ${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY} as the Cromwell configuration directory"
-    addVar CROMWELL_CONF_DIR="${PERF_ROOT}/test_cases/${TEST_CASE_DIRECTORY}"
-
-    # Also copy the default one next to it so we can include it
-    cp ${PERF_ROOT}/vm_scripts/cromwell/cromwell.conf ${CROMWELL_CONF_DIR}/cromwell_default.conf
-else
-    echo "Using ${PERF_ROOT}/vm_scripts/cromwell as the Cromwell configuration directory"
-    addVar CROMWELL_CONF_DIR="${PERF_ROOT}/vm_scripts/cromwell"
-fi
-
-addVar REPORT_URL="$(strip_trailing_slash "gs://${GCS_REPORT_BUCKET}/${GCS_REPORT_PATH}")"
-
-# Start cromwell and cloud sql proxy
-prepare_statsd_proxy
-docker-compose -f ${PERF_ROOT}/vm_scripts/docker-compose.yml up -d
-
-# Intermittently upload Cromwell logs to the bucket
-while true
-do
-    export_cromwell_logs
-    sleep 60
-done
diff --git a/scripts/perf/helper.inc.sh b/scripts/perf/helper.inc.sh
deleted file mode 100644
index aa9e9818c7b..00000000000
--- a/scripts/perf/helper.inc.sh
+++ /dev/null
@@ -1,279 +0,0 @@
-#!/usr/bin/env bash
-
-# Set some global constants:
-typeset CROMWELL_EXECUTION_BUCKET=gs://cromwell-perf-test/
-
-typeset DOCKER_ETC_PATH="/usr/share/etc"
-typeset CROMWELL_PERF_PROJECT=broad-dsde-cromwell-perf
-
-if test -f "/etc/vault-token-dsde"
-then
-  typeset VAULT_TOKEN=$(cat /etc/vault-token-dsde)
-fi
-
-wait_for_cromwell() {
-  git clone https://github.com/vishnubob/wait-for-it.git /wait-for-it
-  chmod u+x /wait-for-it/wait-for-it.sh
-  # Give 5 minutes to cromwell to be online
-
-  echo "[$(date)] Waiting for http://${CROMWELL_UNDER_TEST}:8000/engine/v1/version to appear..."
-  /wait-for-it/wait-for-it.sh ${CROMWELL_UNDER_TEST}:8000 -t 300
-  READY=$?
-  if [ ${READY} -eq 0 ]
-  then
-      # Just wait a bit longer - no rush, this is a chill VM - this is because cromwell responds to requests before being really ready...
-      sleep 30
-    
-      CROMWELL_VERSION=$(curl --silent -X GET "http://${CROMWELL_UNDER_TEST}:8000/engine/v1/version" -H "accept: application/json" | jq -r '.cromwell')
-      if [ -z ${CROMWELL_VERSION} ]
-      then
-        echo "Cromwell was up but failed to return its version, so something went wrong, shutting down"
-        shutdown
-      fi
-      export CROMWELL_VERSION
-  else
-    echo "Cromwell was not ready after 5 minutes, shutting down"
-    shutdown
-  fi
-}
-
-# Waits for Cromwell. Works even from *outside* a google instance
-custom_wait_for_cromwell() {
-
-  set +e
-
-  local cromwell_under_test=$1
-
-  RESULT=1
-  ATTEMPTS=0
-  # increase max tries from 20 to 60 to allow more time for cromwell instance to deploy
-  MAX_ATTEMPTS=60
-
-  while [ "${ATTEMPTS}" -le "${MAX_ATTEMPTS}" -a "${RESULT}" -gt "0" ]
-  do
-    echo "[$(date)] Waiting for Cromwell (http://${cromwell_under_test}:8000/engine/v1/version) to come up (tried ${ATTEMPTS} times so far)"
-    sleep 30
-    ATTEMPTS=$((ATTEMPTS + 1))
-
-    CROMWELL_VERSION_JSON=$(curl --silent -X GET "http://${cromwell_under_test}:8000/engine/v1/version" -H "accept: application/json")
-    RESULT=$?
-
-    CROMWELL_VERSION=$(echo "${CROMWELL_VERSION_JSON}" | jq -r '.cromwell')
-
-    if [ "${RESULT}" -eq "0" -a -z "${CROMWELL_VERSION}" ]
-    then
-      echo "Cromwell was up but failed to return its version, maybe something went wrong? Continuing waiting..."
-      RESULT=1
-    fi
-  done
-
-  if [ "${RESULT}" -gt "0" ]
-  then
-    echo "Cromwell never came up after ${ATTEMPTS} attempts"
-    exit 1
-  else
-    echo "Cromwell came up after ${ATTEMPTS} attempts"
-  fi
-}
-
-export_centaur_logs() {
-    echo "Exporting centaur logs to ${REPORT_URL}"
-
-    # Copy centaur log
-    gsutil -h "Content-Type:text/plain" cp "${CROMWELL_ROOT}/centaur.log" "${REPORT_URL}/centaur.log" || true
-
-    # Copy test_rc.log
-    echo "${TEST_RC}" > test_rc.txt && gsutil -h "Content-Type:text/plain" cp "test_rc.txt" "${REPORT_URL}/test_rc.txt" || true
-}
-
-export_cromwell_logs() {
-    echo "Exporting Cromwell logs to ${REPORT_URL} as $(hostname)"
-
-    # Copy the cromwell container logs
-    gsutil -h "Content-Type:text/plain" cp "$(docker inspect --format='{{.LogPath}}' cromwell)" "${REPORT_URL}/cromwell_$(hostname).log" || true
-    # Copy the docker daemon logs
-    gsutil -h "Content-Type:text/plain" cp "/var/log/daemon.log" "${REPORT_URL}/daemon_$(hostname).log" || true
-}
-
-
-export_logs() {
-    export REPORT_URL="gs://${GCS_REPORT_BUCKET}/${GCS_REPORT_PATH}"
-
-    export_cromwell_logs
-    export_centaur_logs
-}
-
-clean_up() {
-    if [ "${CLEAN_UP}" = true ]
-    then
-        gcloud sql instances delete ${CLOUD_SQL_INSTANCE}
-        self_destruct_instance
-    fi
-}
-
-self_destruct_instance() {
-    gcloud compute instances delete $(curl --silent "http://metadata.google.internal/computeMetadata/v1/instance/name" -H "Metadata-Flavor: Google") --zone=us-central1-c -q
-}
-
-run_test() {
-    cd ${CROMWELL_ROOT}
-
-    if [ -z ${GCS_REPORT_PATH} ]
-    then
-        export GCS_REPORT_PATH="${TEST_CASE_DIRECTORY}/${CROMWELL_VERSION}/${BUILD_ID}"
-    fi
-
-    sbt \
-      --error \
-      -Dconfig.file=${CENTAUR_CONF_DIR}/centaur.conf \
-      -Dcentaur.cromwell.mode="url" \
-      -Dcentaur.cromwell.url="http://${CROMWELL_UNDER_TEST}:8000" \
-      "centaur/it:testOnly centaur.ExternalTestCaseSpec" | tee centaur.log
-    export TEST_RC=$?
-}
-
-shutdown() {
-    export_logs
-    docker-compose -f ${PERF_ROOT}/vm_scripts/docker-compose.yml down
-    clean_up
-}
-
-function join() { local IFS=","; echo "$*"; }
-
-read_path_from_vault_json() {
-  local path=$1
-  local field=$2
-
-  docker run --rm -e VAULT_TOKEN=$VAULT_TOKEN broadinstitute/dsde-toolbox vault read -format=json "${path}" | jq --exit-status -r "${field}"
-}
-
-
-read_service_account_from_vault() {
-  mkdir -p mnt
-  read_path_from_vault_json "secret/dsp/cromwell/perf/service-account-deployer" '.data.service_account' > mnt/sa.json
-}
-
-gcloud_run_as_service_account() {
-  local name="$1"
-  local command="$2"
-  docker run --name ${name} -v "$(pwd)"/mnt:${DOCKER_ETC_PATH} --rm gcr.io/google.com/cloudsdktool/cloud-sdk:slim \
-    /bin/bash -c "\
-    gcloud auth activate-service-account --key-file ${DOCKER_ETC_PATH}/sa.json 2> /dev/null &&\
-    ${command}"
-}
-
-gcloud_get_field_from_instance_describe() {
-  local instance="$1"
-  local field="$2"
-
-  INSTANCE_METADATA=$(gcloud_run_as_service_account "perf_read_field_${field}" \
-   "gcloud \
-     --project broad-dsde-cromwell-perf \
-     compute instances describe \
-     --zone us-central1-c \
-     ${instance}
-   ")
-
-   echo "${INSTANCE_METADATA}" | grep "${field}" | awk '{print $2}'
-}
-
-gcloud_deploy_instance() {
-  local taskname=$1
-  local instance_name=$2
-  local instance_template=$3
-  local joined_metadata_string=$4
-
-  gcloud_run_as_service_account "${taskname}" \
-  "gcloud \
-    --verbosity info \
-    --project broad-dsde-cromwell-perf \
-    compute instances create ${instance_name} \
-      --zone us-central1-c \
-      --source-instance-template ${instance_template} \
-      --metadata-from-file startup-script=$DOCKER_ETC_PATH/run_on_instance.sh \
-      --metadata ${joined_metadata_string}"
-}
-
-gcloud_delete_instance() {
-  local taskname=$1
-  local instance_name=$2
-
-  gcloud_run_as_service_account "${taskname}" " \
-  gcloud \
-    --verbosity info \
-    --project broad-dsde-cromwell-perf \
-    compute instances delete ${instance_name} \
-      --zone=us-central1-c -q"
-}
-
-# Waits for a remote machine to start, and then stop, responding to PINGs
-wait_for_ping_to_start_then_stop() {
-  local address="$1"
-
-  # Turn off "fail on exit code" and "debug logging":
-  set +e
-  set +x
-
-  RESULT=1
-  ATTEMPTS=0
-  MAX_ATTEMPTS=20
-
-  while [ "${ATTEMPTS}" -le "${MAX_ATTEMPTS}" -a "${RESULT}" -gt "0" ]
-  do
-    echo "[$(date)] Waiting for ${address} to respond to pings (tried ${ATTEMPTS} times so far)"
-    sleep 30
-    ATTEMPTS=$((ATTEMPTS + 1))
-
-    ping -c 1 ${address} &> /dev/null
-    RESULT=$?
-  done
-
-  if [ "${RESULT}" -gt "0" ]
-  then
-    echo "[$(date)] ${address} never came up after ${ATTEMPTS} attempts"
-    exit 1
-  else
-    echo "[$(date)] ${address} came up after ${ATTEMPTS} attempts"
-  fi
-
-  while ping -c 1 ${address} &> /dev/null
-  do
-    echo "[$(date)] ${address} is still responding to pings. Pausing before next ping"
-    sleep 30
-  done
-
-  echo "[$(date)] ${address} has stopped responding to pings."
-
-  set -e
-}
-
-strip_trailing_slash() {
-  local path=$1
-  echo "${path}" | sed 's/\/$//'
-}
-
-# Patch the activation policy of the Cloud SQL Instance referenced by $CLOUD_SQL_INSTANCE.
-# In practice used mostly to turn a Cloud SQL instance on or off.
-#
-# Arguments:
-#   `op` - a descriptive term that will appear in the Docker container that runs gcloud.
-#   `policy` - the Cloud SQL activation policy, should be one of ALWAYS, NEVER or ON_DEMAND.
-#              For more details: https://cloud.google.com/sql/docs/mysql/start-stop-restart-instance
-private::patch_cloud_sql_activation_policy() {
-  op="$1"
-  policy="$2"
-
-  mkdir -p mnt
-  # Read the service account credentials from vault:
-  read_service_account_from_vault
-
-  gcloud_run_as_service_account "perf_sql_${op}_gcloud_${BUILD_NUMBER}" "gcloud -q --project broad-dsde-cromwell-perf sql instances patch ${CLOUD_SQL_INSTANCE} --activation-policy ${policy}"
-}
-
-start_cloud_sql() {
-  private::patch_cloud_sql_activation_policy "start" "ALWAYS"
-}
-
-stop_cloud_sql() {
-  private::patch_cloud_sql_activation_policy "stop" "NEVER"
-}
diff --git a/scripts/perf/run_centaur_blocking/create_runner_instance.sh b/scripts/perf/run_centaur_blocking/create_runner_instance.sh
deleted file mode 100755
index 9c0603f5dba..00000000000
--- a/scripts/perf/run_centaur_blocking/create_runner_instance.sh
+++ /dev/null
@@ -1,47 +0,0 @@
-#!/bin/bash
-
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-# Prepare the startup script to run on new instance
-mkdir -p mnt
-cp scripts/perf/run_centaur_blocking/test_runner_script.sh mnt/
-
-
-read_service_account_from_vault
-
-metadata=(
-  "BUILD_NUMBER=${BUILD_NUMBER}"
-  "BUILD_TAG=${BUILD_TAG}"
-  "CLEAN_UP=true"
-  "CROMWELL_PROJECT=${CROMWELL_PERF_PROJECT}"
-  "CROMWELL_BUCKET=${CROMWELL_EXECUTION_BUCKET}"
-  "CROMWELL_PERF_SCRIPTS_BRANCH=${CROMWELL_BRANCH}"
-  "CROMWELL_UNDER_TEST=${CROMWELL_UNDER_TEST}"
-  "GCS_REPORT_PATH=${GCS_REPORT_PATH}"
-  "GCS_REPORT_BUCKET=${GCS_REPORT_BUCKET}"
-  "TEST_CASE_DIRECTORY=${TEST_CASE_DIRECTORY}"
-)
-
-# NB: The 'cromwell-perf' tag is required to give cromwell the 'perf' firewall rules
-
-gcloud_run_as_service_account "perf_centaur_test_runner_${BUILD_NUMBER}" \
-  "gcloud \
-    --verbosity info \
-    --project ${CROMWELL_PERF_PROJECT} \
-    compute \
-    instances \
-    create ${BUILD_TAG} \
-    --zone us-central1-c \
-    --source-instance-template ${INSTANCE_TEMPLATE} \
-    --tags cromwell-perf \
-    --metadata-from-file startup-script=${DOCKER_ETC_PATH}/test_runner_script.sh \
-    --metadata \
-        $(join ${metadata[@]})"  | tee startupResult.txt
-
-typeset CENTAUR_TEST_RUNNER=$(cat startupResult.txt | tail -n1 | awk '{print $5}' )
-
-echo "Determined that CENTAUR_TEST_RUNNER=${CENTAUR_TEST_RUNNER}"
-
-wait_for_ping_to_start_then_stop ${CENTAUR_TEST_RUNNER}
diff --git a/scripts/perf/run_centaur_blocking/test_runner_script.sh b/scripts/perf/run_centaur_blocking/test_runner_script.sh
deleted file mode 100644
index 0c6baf9a688..00000000000
--- a/scripts/perf/run_centaur_blocking/test_runner_script.sh
+++ /dev/null
@@ -1,88 +0,0 @@
-#! /bin/bash
-
-# Deliberately don't set these options. The script must continue to run (and clean itself up) even if the centaur tests
-# fail.
-#set -euo pipefail
-set +x
-
-### /!\ This script assumes docker and docker compose are already installed on the host
-
-# Utility function to extract values from instance metadata
-extract_metadata() {
-  curl "http://metadata.google.internal/computeMetadata/v1/instance/attributes/$1" -H "Metadata-Flavor: Google"
-}
-
-# Exports an env var and also adds it to the root bashrc. This way if there is a need to ssh onto the machine
-# for debugging one will have the env variables already set when using root
-addVar() {
-  export $1
-  echo "export $1" >> /root/.bashrc
-}
-
-# Make sure ip forwarding is enabled by default so that docker doesn't loses connectivity
-echo "net.ipv4.ip_forward = 1" > /etc/sysctl.conf
-
-# Extract env variables from instance metadata:
-addVar TEST_CASE_DIRECTORY=$(extract_metadata TEST_CASE_DIRECTORY)
-addVar CROMWELL_UNDER_TEST=$(extract_metadata CROMWELL_UNDER_TEST)
-addVar CROMWELL_PROJECT=$(extract_metadata CROMWELL_PROJECT)
-addVar GCS_REPORT_BUCKET=$(extract_metadata GCS_REPORT_BUCKET)
-addVar GCS_REPORT_PATH=$(extract_metadata GCS_REPORT_PATH)
-addVar BUILD_ID=$(extract_metadata BUILD_TAG)
-addVar CROMWELL_PERF_SCRIPTS_BRANCH=$(extract_metadata CROMWELL_PERF_SCRIPTS_BRANCH)
-
-addVar CROMWELL_ROOT=/app
-addVar PERF_ROOT=${CROMWELL_ROOT}/scripts/perf
-
-# Clone cromwell to get the perf scripts. Use https to avoid ssh fingerprint prompt when the script runs
-git clone -b ${CROMWELL_PERF_SCRIPTS_BRANCH} --depth 1 --single-branch https://github.com/broadinstitute/cromwell.git ${CROMWELL_ROOT}
-
-source ${PERF_ROOT}/helper.inc.sh
-
-addVar CLEAN_UP=true
-
-addVar REPORT_BUCKET="cromwell-perf-test-reporting"
-addVar TEST_WORKFLOW_ROOT="${PERF_ROOT}/test_cases"
-addVar REPORT_URL="$(strip_trailing_slash "gs://${GCS_REPORT_BUCKET}/${GCS_REPORT_PATH}")"
-
-if [ -n "${TEST_CASE_DIRECTORY}" ]
-then
-    # Must be a directory
-    TEST_WORKFLOW_DIR=${TEST_WORKFLOW_ROOT}/${TEST_CASE_DIRECTORY}
-    
-    # If it contains a custom cromwell configuration, use that 
-    if [ -f "${TEST_WORKFLOW_DIR}/cromwell.conf" ]
-    then
-        addVar CROMWELL_CONF_DIR=${TEST_WORKFLOW_DIR}
-        # copy the default one next to it so we can include it
-        cp ${PERF_ROOT}/vm_scripts/cromwell/cromwell.conf ${CROMWELL_CONF_DIR}/cromwell_default.conf
-    else
-        # Otherwise use the default one
-        addVar CROMWELL_CONF_DIR=${PERF_ROOT}/vm_scripts/cromwell
-    fi
-    
-    # If it contains a custom centaur configuration, use that 
-    if [ -f "${TEST_WORKFLOW_DIR}/centaur.conf" ]
-    then
-        addVar CENTAUR_CONF_DIR=${TEST_WORKFLOW_DIR}
-        # copy the default one next to it so we can include it
-        cp ${PERF_ROOT}/vm_scripts/centaur/centaur.conf ${CENTAUR_CONF_DIR}/centaur_default.conf
-    else
-        # Otherwise use the default one
-        addVar CENTAUR_CONF_DIR=${PERF_ROOT}/vm_scripts/centaur
-    fi
-    
-    addVar CENTAUR_TEST_FILE=$(ls ${TEST_WORKFLOW_DIR}/*.test | head)
-    sed -i "s/\$BRANCH/${CROMWELL_PERF_SCRIPTS_BRANCH}/" ${CENTAUR_TEST_FILE}
-fi
-
-if [ -n "${CENTAUR_TEST_FILE}" ]
-then
-    wait_for_cromwell
-    run_test
-else
-    echo "No workflow provided, shutting down"
-fi
-
-export_centaur_logs
-self_destruct_instance
diff --git a/scripts/perf/start_database/start_database.sh b/scripts/perf/start_database/start_database.sh
deleted file mode 100644
index 779c6350e77..00000000000
--- a/scripts/perf/start_database/start_database.sh
+++ /dev/null
@@ -1,6 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-start_cloud_sql
diff --git a/scripts/perf/stop_database/stop_database.sh b/scripts/perf/stop_database/stop_database.sh
deleted file mode 100644
index 8772f793fa5..00000000000
--- a/scripts/perf/stop_database/stop_database.sh
+++ /dev/null
@@ -1,6 +0,0 @@
-#!/bin/bash
-set -euo pipefail
-
-source scripts/perf/helper.inc.sh
-
-stop_cloud_sql
diff --git a/scripts/perf/test_cases/blacklist_call_caching_stress/blacklist_call_caching_stress.test b/scripts/perf/test_cases/blacklist_call_caching_stress/blacklist_call_caching_stress.test
deleted file mode 100644
index a00e1fdff3f..00000000000
--- a/scripts/perf/test_cases/blacklist_call_caching_stress/blacklist_call_caching_stress.test
+++ /dev/null
@@ -1,12 +0,0 @@
-name: blacklist_call_caching_stress
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.inputs"
-  options: "gs://cromwell-perf-test/workflow_related_files/call_caching_sa2_workflow_options.json"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/blacklist_call_caching_stress/centaur.conf b/scripts/perf/test_cases/blacklist_call_caching_stress/centaur.conf
deleted file mode 100644
index 2b7ce0eed62..00000000000
--- a/scripts/perf/test_cases/blacklist_call_caching_stress/centaur.conf
+++ /dev/null
@@ -1,18 +0,0 @@
-include required("centaur_default.conf")
-
-centaur {
-  metadata-args {
-    includeKey = [
-      "id",
-      "%shardIndex%",
-      "%hitFailures%",
-      "%executionEvents%",
-      "status",
-      "workflowName",
-      "submission",
-      "start",
-      "end",
-      "failures"
-    ]
-  }
-}
diff --git a/scripts/perf/test_cases/blacklist_call_caching_stress/cromwell.conf b/scripts/perf/test_cases/blacklist_call_caching_stress/cromwell.conf
deleted file mode 100644
index 710bfed0fa8..00000000000
--- a/scripts/perf/test_cases/blacklist_call_caching_stress/cromwell.conf
+++ /dev/null
@@ -1,9 +0,0 @@
-include required("cromwell_default.conf")
-
-engine.filesystems.gcs.auth = "user-service-account"
-backend.providers.Papi.config.genomics.auth = "user-service-account"
-backend.providers.Papi.config.filesystems.gcs.auth = "user-service-account"
-
-
-call-caching.blacklist-cache.enabled = true
-call-caching.blacklist-cache.ttl = "3 days"
diff --git a/scripts/perf/test_cases/call_caching_lots_of_inputs/call_caching_stress_lots_of_inputs.test b/scripts/perf/test_cases/call_caching_lots_of_inputs/call_caching_stress_lots_of_inputs.test
deleted file mode 100644
index 8210853b91e..00000000000
--- a/scripts/perf/test_cases/call_caching_lots_of_inputs/call_caching_stress_lots_of_inputs.test
+++ /dev/null
@@ -1,11 +0,0 @@
-name: call_caching_lots_of_inputs
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.inputs"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.inputs b/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.inputs
deleted file mode 100644
index 84d05f5842f..00000000000
--- a/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.inputs
+++ /dev/null
@@ -1,804 +0,0 @@
-{
-  "call_cache_read_input_files_perf_test.files" : [
-    "gs://cromwell-perf-testing/lots_of_input_files/input-1",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-2",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-3",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-4",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-5",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-6",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-7",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-8",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-9",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-10",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-11",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-12",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-13",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-14",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-15",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-16",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-17",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-18",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-19",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-20",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-21",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-22",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-23",
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-    "gs://cromwell-perf-testing/lots_of_input_files/input-604",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-605",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-606",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-607",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-608",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-609",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-610",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-611",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-612",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-613",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-614",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-615",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-616",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-617",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-618",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-619",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-620",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-621",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-622",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-623",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-624",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-625",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-626",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-627",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-628",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-629",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-630",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-631",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-632",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-633",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-634",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-635",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-636",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-637",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-638",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-639",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-640",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-641",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-642",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-643",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-644",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-645",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-646",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-647",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-648",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-649",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-650",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-651",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-652",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-653",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-654",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-655",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-656",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-657",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-658",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-659",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-660",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-661",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-662",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-663",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-664",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-665",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-666",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-667",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-668",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-669",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-670",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-671",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-672",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-673",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-674",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-675",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-676",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-677",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-678",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-679",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-680",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-681",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-682",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-683",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-684",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-685",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-686",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-687",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-688",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-689",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-690",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-691",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-692",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-693",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-694",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-695",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-696",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-697",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-698",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-699",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-700",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-701",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-702",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-703",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-704",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-705",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-706",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-707",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-708",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-709",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-710",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-711",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-712",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-713",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-714",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-715",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-716",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-717",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-718",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-719",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-720",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-721",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-722",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-723",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-724",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-725",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-726",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-727",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-728",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-729",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-730",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-731",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-732",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-733",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-734",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-735",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-736",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-737",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-738",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-739",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-740",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-741",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-742",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-743",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-744",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-745",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-746",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-747",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-748",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-749",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-750",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-751",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-752",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-753",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-754",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-755",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-756",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-757",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-758",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-759",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-760",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-761",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-762",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-763",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-764",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-765",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-766",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-767",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-768",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-769",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-770",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-771",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-772",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-773",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-774",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-775",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-776",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-777",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-778",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-779",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-780",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-781",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-782",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-783",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-784",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-785",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-786",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-787",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-788",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-789",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-790",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-791",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-792",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-793",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-794",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-795",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-796",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-797",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-798",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-799",
-    "gs://cromwell-perf-testing/lots_of_input_files/input-800"
-  ]
-}
\ No newline at end of file
diff --git a/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.wdl b/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.wdl
deleted file mode 100644
index 961a3b36891..00000000000
--- a/scripts/perf/test_cases/call_caching_lots_of_inputs/lots_of_inputs.wdl
+++ /dev/null
@@ -1,28 +0,0 @@
-version 1.0
-
-task lots_of_inputs {
-    input {
-        Array[File] files
-    }
-    
-    command {
-        echo ~{sep=' ' files}
-    }
-    
-    runtime {
-        docker: "ubuntu@sha256:de774a3145f7ca4f0bd144c7d4ffb2931e06634f11529653b23eba85aef8e378"
-    }
-    
-    output {
-        File out = stdout()
-    }
-}
-
-workflow call_cache_read_input_files_perf_test {
-    input {
-        Array[File] files
-    }
-    scatter(i in range(100)) {
-        call lots_of_inputs { input: files = files }
-    }
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_no_hint/call_caching_stress_no_hint.test b/scripts/perf/test_cases/call_caching_stress_no_hint/call_caching_stress_no_hint.test
deleted file mode 100644
index 41fdcc6858f..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_no_hint/call_caching_stress_no_hint.test
+++ /dev/null
@@ -1,12 +0,0 @@
-name: call_caching_stress_no_hint
-testFormat: workflowsuccess
-
-files {
-  workflow: "../call_caching_stress_workflow/callCachingStress.wdl"
-  inputs: "../call_caching_stress_workflow/callCachingStress.inputs"
-  options: "gs://cromwell-perf-test/workflow_related_files/call_caching_sa2_workflow_options.json"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_no_hint/centaur.conf b/scripts/perf/test_cases/call_caching_stress_no_hint/centaur.conf
deleted file mode 100644
index 2b7ce0eed62..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_no_hint/centaur.conf
+++ /dev/null
@@ -1,18 +0,0 @@
-include required("centaur_default.conf")
-
-centaur {
-  metadata-args {
-    includeKey = [
-      "id",
-      "%shardIndex%",
-      "%hitFailures%",
-      "%executionEvents%",
-      "status",
-      "workflowName",
-      "submission",
-      "start",
-      "end",
-      "failures"
-    ]
-  }
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_no_hint/cromwell.conf b/scripts/perf/test_cases/call_caching_stress_no_hint/cromwell.conf
deleted file mode 100644
index 0ce40f48486..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_no_hint/cromwell.conf
+++ /dev/null
@@ -1,5 +0,0 @@
-include required("cromwell_default.conf")
-
-engine.filesystems.gcs.auth = "user-service-account"
-backend.providers.Papi.config.genomics.auth = "user-service-account"
-backend.providers.Papi.config.filesystems.gcs.auth = "user-service-account"
diff --git a/scripts/perf/test_cases/call_caching_stress_with_hint/call_caching_stress_with_hint.test b/scripts/perf/test_cases/call_caching_stress_with_hint/call_caching_stress_with_hint.test
deleted file mode 100644
index f8a02e989d5..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_with_hint/call_caching_stress_with_hint.test
+++ /dev/null
@@ -1,12 +0,0 @@
-name: call_caching_stress_with_hint
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.inputs"
-  options: "gs://cromwell-perf-test/workflow_related_files/call_caching_sa2_options_with_cache_hints.json"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_with_hint/centaur.conf b/scripts/perf/test_cases/call_caching_stress_with_hint/centaur.conf
deleted file mode 100644
index 2b7ce0eed62..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_with_hint/centaur.conf
+++ /dev/null
@@ -1,18 +0,0 @@
-include required("centaur_default.conf")
-
-centaur {
-  metadata-args {
-    includeKey = [
-      "id",
-      "%shardIndex%",
-      "%hitFailures%",
-      "%executionEvents%",
-      "status",
-      "workflowName",
-      "submission",
-      "start",
-      "end",
-      "failures"
-    ]
-  }
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_with_hint/cromwell.conf b/scripts/perf/test_cases/call_caching_stress_with_hint/cromwell.conf
deleted file mode 100644
index 0ce40f48486..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_with_hint/cromwell.conf
+++ /dev/null
@@ -1,5 +0,0 @@
-include required("cromwell_default.conf")
-
-engine.filesystems.gcs.auth = "user-service-account"
-backend.providers.Papi.config.genomics.auth = "user-service-account"
-backend.providers.Papi.config.filesystems.gcs.auth = "user-service-account"
diff --git a/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.inputs b/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.inputs
deleted file mode 100644
index 281858ee08d..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.inputs
+++ /dev/null
@@ -1,14 +0,0 @@
-{
-  "callCachingStress.input_files": [
-    "gs://call-caching-testing-sa1/inputs/input1.txt",
-    "gs://call-caching-testing-sa1/inputs/input2.txt",
-    "gs://call-caching-testing-sa1/inputs/input3.txt",
-    "gs://call-caching-testing-sa1/inputs/input4.txt",
-    "gs://call-caching-testing-sa1/inputs/input5.txt",
-    "gs://call-caching-testing-sa1/inputs/input6.txt",
-    "gs://call-caching-testing-sa1/inputs/input7.txt",
-    "gs://call-caching-testing-sa1/inputs/input8.txt",
-    "gs://call-caching-testing-sa1/inputs/input9.txt",
-    "gs://call-caching-testing-sa1/inputs/input10.txt"
-  ]
-}
diff --git a/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.wdl b/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.wdl
deleted file mode 100644
index c61f55ecd35..00000000000
--- a/scripts/perf/test_cases/call_caching_stress_workflow/callCachingStress.wdl
+++ /dev/null
@@ -1,32 +0,0 @@
-version 1.0
-
-#NOTE: Please do not change the spelling for 'nb_ouptputs'. This workflow is used for Call Cache test in Perf.
-#      Since there are cache entries inside test db with wrong spelling, correcting the spelling
-#      will fail the test as it won't be call cached anymore!
-task simpleTask {
-    input {
-        Int seed
-        Int nb_ouptputs = 10
-        Array[File] input_files
-    }
-    command {
-        for i in `seq ~{nb_ouptputs}`; do echo $i > $i.txt; done
-    }
-    runtime {
-        docker: "ubuntu@sha256:3f119dc0737f57f704ebecac8a6d8477b0f6ca1ca0332c7ee1395ed2c6a82be7"
-    }
-    output {
-        Array[File] outputs = glob("*.txt")
-    }
-}
-
-workflow callCachingStress {
-    input {
-        Int scatterSize = 1000
-        Array[File] input_files
-    }
-
-    scatter(i in range(scatterSize)) {
-        call simpleTask { input: input_files = input_files, seed = i }
-    }
-}
diff --git a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.inputs b/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.inputs
deleted file mode 100644
index 31365490649..00000000000
--- a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.inputs
+++ /dev/null
@@ -1,39 +0,0 @@
-{
-  "germline_single_sample_workflow.ref_fasta_index": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.fai",
-  "germline_single_sample_workflow.final_vcf_base_name": "NA12878_small",
-  "germline_single_sample_workflow.skip_QC": "False",
-  "germline_single_sample_workflow.wgs_evaluation_interval_list": "gs://gcp-public-data--broad-references/hg38/v0/wgs_evaluation_regions.hg38.interval_list",
-  "germline_single_sample_workflow.ref_dict": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dict",
-  "germline_single_sample_workflow.contamination_sites_ud": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.UD",
-  "germline_single_sample_workflow.ref_amb": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.amb",
-  "germline_single_sample_workflow.sample_name": "NA12878_small",
-  "germline_single_sample_workflow.wgs_calling_interval_list": "gs://gcp-public-data--broad-references/hg38/v0/wgs_calling_regions.hg38.interval_list",
-  "germline_single_sample_workflow.agg_preemptible_tries": 3,
-  "germline_single_sample_workflow.dbSNP_vcf_index": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dbsnp138.vcf.idx",
-  "germline_single_sample_workflow.preemptible_tries": 3,
-  "germline_single_sample_workflow.contamination_sites_mu": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.mu",
-  "germline_single_sample_workflow.base_file_name": "NA12878_small",
-  "germline_single_sample_workflow.contamination_sites_bed": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.contam.bed",
-  "germline_single_sample_workflow.use_gatk4_haplotype_caller": "True",
-  "germline_single_sample_workflow.make_gatk4_single_sample_vcf": "True",
-  "germline_single_sample_workflow.ref_pac": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.pac",
-  "germline_single_sample_workflow.break_bands_at_multiples_of": 1000000,
-  "germline_single_sample_workflow.ref_fasta": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta",
-  "germline_single_sample_workflow.ref_ann": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.ann",
-  "germline_single_sample_workflow.known_indels_sites_VCFs": [
-    "gs://gcp-public-data--broad-references/hg38/v0/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz",
-    "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.known_indels.vcf.gz"
-  ],
-  "germline_single_sample_workflow.ref_alt": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.alt",
-  "germline_single_sample_workflow.flowcell_unmapped_bams_fofn": "gs://gatk-test-data/wgs_ubam/NA12878_24RG/NA12878_24RG_small.txt",
-  "germline_single_sample_workflow.ref_sa": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.sa",
-  "germline_single_sample_workflow.dbSNP_vcf": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.dbsnp138.vcf",
-  "germline_single_sample_workflow.known_indels_sites_indices": [
-    "gs://gcp-public-data--broad-references/hg38/v0/Mills_and_1000G_gold_standard.indels.hg38.vcf.gz.tbi",
-    "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.known_indels.vcf.gz.tbi"
-  ],
-  "germline_single_sample_workflow.wgs_coverage_interval_list": "gs://gcp-public-data--broad-references/hg38/v0/wgs_coverage_regions.hg38.interval_list",
-  "germline_single_sample_workflow.ref_bwt": "gs://gcp-public-data--broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.64.bwt",
-  "germline_single_sample_workflow.unmapped_bam_suffix": ".unmapped.bam",
-  "germline_single_sample_workflow.haplotype_scatter_count": 50
-}
diff --git a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.test b/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.test
deleted file mode 100644
index 876f247a045..00000000000
--- a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.test
+++ /dev/null
@@ -1,11 +0,0 @@
-name: five_dollar_genome
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.inputs"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.wdl b/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.wdl
deleted file mode 100644
index 9d46689650a..00000000000
--- a/scripts/perf/test_cases/five_dollar_genome/five_dollar_genome.wdl
+++ /dev/null
@@ -1,521 +0,0 @@
-## Copyright Broad Institute, 2018 
-## 
-## This WDL pipeline implements data pre-processing and initial variant calling (GVCF 
-## generation) according to the GATK Best Practices (June 2016) for germline SNP and 
-## Indel discovery in human whole-genome sequencing data. 
-## 
-## Requirements/expectations : 
-## - Human whole-genome pair-end sequencing data in unmapped BAM (uBAM) format 
-## - One or more read groups, one per uBAM file, all belonging to a single sample (SM) 
-## - Input uBAM files must additionally comply with the following requirements: 
-## - - filenames all have the same suffix (we use ".unmapped.bam") 
-## - - files must pass validation by ValidateSamFile 
-## - - reads are provided in query-sorted order 
-## - - all reads must have an RG tag 
-## - GVCF output names must end in ".g.vcf.gz" 
-## - Reference genome must be Hg38 with ALT contigs 
-## 
-## Runtime parameters are optimized for Broad's Google Cloud Platform implementation. 
-## For program versions, see docker containers. 
-## 
-## LICENSING : 
-## This script is released under the WDL source code license (BSD-3) (see LICENSE in 
-## https://github.com/broadinstitute/wdl). Note however that the programs it calls may 
-## be subject to different licenses. Users are responsible for checking that they are 
-## authorized to run all programs before running this script. Please see the docker 
-## page at https://hub.docker.com/r/broadinstitute/genomes-in-the-cloud/ for detailed 
-## licensing information pertaining to the included programs. 
- 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:alignment/versions/4/plain-WDL/descriptor" as Alignment 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:split-large-readgroup/versions/4/plain-WDL/descriptor" as SplitRG 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:quality-control/versions/2/plain-WDL/descriptor" as QC 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:bam-processing/versions/4/plain-WDL/descriptor" as Processing 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:germline-variant-discovery/versions/3/plain-WDL/descriptor" as Calling 
-import "https://api.firecloud.org/ga4gh/v1/tools/gatk:utilities/versions/2/plain-WDL/descriptor" as Utils 
- 
-# WORKFLOW DEFINITION 
-workflow germline_single_sample_workflow { 
- 
-  File flowcell_unmapped_bams_fofn 
-  Array[File] flowcell_unmapped_bams = read_lines(flowcell_unmapped_bams_fofn) 
- 
-  File contamination_sites_ud 
-  File contamination_sites_bed 
-  File contamination_sites_mu 
-  File wgs_evaluation_interval_list 
-  File wgs_coverage_interval_list 
- 
-  String sample_name 
-  String base_file_name 
-  String final_vcf_base_name 
-  String unmapped_bam_suffix 
- 
-  File wgs_calling_interval_list 
-  Int haplotype_scatter_count 
-  Int break_bands_at_multiples_of 
-  Int read_length = 250 
- 
-  File ref_fasta 
-  File ref_fasta_index 
-  File ref_dict 
-  File ref_alt 
-  File ref_bwt 
-  File ref_sa 
-  File ref_amb 
-  File ref_ann 
-  File ref_pac 
- 
-  File dbSNP_vcf 
-  File dbSNP_vcf_index 
-  Array[File] known_indels_sites_VCFs 
-  Array[File] known_indels_sites_indices 
- 
-  Int preemptible_tries 
-  Int agg_preemptible_tries 
- 
-  Boolean skip_QC 
-  Boolean make_gatk4_single_sample_vcf 
-  Boolean use_gatk4_haplotype_caller 
- 
-  Float cutoff_for_large_rg_in_gb = 20.0 
- 
-  String bwa_commandline="bwa mem -K 100000000 -p -v 3 -t 16 -Y $bash_ref_fasta" 
- 
-  String recalibrated_bam_basename = base_file_name + ".aligned.duplicates_marked.recalibrated" 
- 
-  Int compression_level = 2 
- 
-  # Get the version of BWA to include in the PG record in the header of the BAM produced 
-  # by MergeBamAlignment. 
-  call Alignment.GetBwaVersion 
- 
-  # Align flowcell-level unmapped input bams in parallel 
-  scatter (unmapped_bam in flowcell_unmapped_bams) { 
- 
-    Float unmapped_bam_size = size(unmapped_bam, "GB") 
- 
-    String unmapped_bam_basename = basename(unmapped_bam, unmapped_bam_suffix) 
- 
-    if (!skip_QC) { 
-      # QC the unmapped BAM 
-      call QC.CollectQualityYieldMetrics as CollectQualityYieldMetrics { 
-        input: 
-          input_bam = unmapped_bam, 
-          metrics_filename = unmapped_bam_basename + ".unmapped.quality_yield_metrics", 
-          preemptible_tries = preemptible_tries 
-      } 
-    } 
- 
-    if (unmapped_bam_size > cutoff_for_large_rg_in_gb) { 
-      # Split bam into multiple smaller bams, 
-      # map reads to reference and recombine into one bam 
-      call SplitRG.split_large_readgroup as SplitRG { 
-        input: 
-          input_bam = unmapped_bam, 
-          bwa_commandline = bwa_commandline, 
-          bwa_version = GetBwaVersion.version, 
-          output_bam_basename = unmapped_bam_basename + ".aligned.unsorted", 
-          ref_fasta = ref_fasta, 
-          ref_fasta_index = ref_fasta_index, 
-          ref_dict = ref_dict, 
-          ref_alt = ref_alt, 
-          ref_amb = ref_amb, 
-          ref_ann = ref_ann, 
-          ref_bwt = ref_bwt, 
-          ref_pac = ref_pac, 
-          ref_sa = ref_sa, 
-          compression_level = compression_level, 
-          preemptible_tries = preemptible_tries 
-      } 
-    } 
- 
-    if (unmapped_bam_size <= cutoff_for_large_rg_in_gb) { 
-      # Map reads to reference 
-      call Alignment.SamToFastqAndBwaMemAndMba as SamToFastqAndBwaMemAndMba { 
-        input: 
-          input_bam = unmapped_bam, 
-          bwa_commandline = bwa_commandline, 
-          output_bam_basename = unmapped_bam_basename + ".aligned.unsorted", 
-          ref_fasta = ref_fasta, 
-          ref_fasta_index = ref_fasta_index, 
-          ref_dict = ref_dict, 
-          ref_alt = ref_alt, 
-          ref_bwt = ref_bwt, 
-          ref_amb = ref_amb, 
-          ref_ann = ref_ann, 
-          ref_pac = ref_pac, 
-          ref_sa = ref_sa, 
-          bwa_version = GetBwaVersion.version, 
-          compression_level = compression_level, 
-          preemptible_tries = preemptible_tries 
-      } 
-    } 
- 
-    File output_aligned_bam = select_first([SamToFastqAndBwaMemAndMba.output_bam, SplitRG.aligned_bam]) 
- 
-    Float mapped_bam_size = size(output_aligned_bam, "GB") 
- 
-    if (!skip_QC) { 
-      # QC the aligned but unsorted readgroup BAM 
-      # no reference as the input here is unsorted, providing a reference would cause an error 
-      call QC.CollectUnsortedReadgroupBamQualityMetrics as CollectUnsortedReadgroupBamQualityMetrics { 
-        input: 
-          input_bam = output_aligned_bam, 
-          output_bam_prefix = unmapped_bam_basename + ".readgroup", 
-          preemptible_tries = preemptible_tries 
-      } 
-    } 
-  } 
- 
-  # Sum the read group bam sizes to approximate the aggregated bam size 
-  call Utils.SumFloats as SumFloats { 
-    input: 
-      sizes = mapped_bam_size, 
-      preemptible_tries = preemptible_tries 
-  } 
- 
-  # Aggregate aligned+merged flowcell BAM files and mark duplicates 
-  # We take advantage of the tool's ability to take multiple BAM inputs and write out a single output 
-  # to avoid having to spend time just merging BAM files. 
-  call Processing.MarkDuplicates as MarkDuplicates { 
-    input: 
-      input_bams = output_aligned_bam, 
-      output_bam_basename = base_file_name + ".aligned.unsorted.duplicates_marked", 
-      metrics_filename = base_file_name + ".duplicate_metrics", 
-      total_input_size = SumFloats.total_size, 
-      compression_level = compression_level, 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  # Sort aggregated+deduped BAM file 
-  call Processing.SortSam as SortSampleBam { 
-    input: 
-      input_bam = MarkDuplicates.output_bam, 
-      output_bam_basename = base_file_name + ".aligned.duplicate_marked.sorted", 
-      compression_level = compression_level, 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  # Create list of sequences for scatter-gather parallelization 
-  call Utils.CreateSequenceGroupingTSV as CreateSequenceGroupingTSV { 
-    input: 
-      ref_dict = ref_dict, 
-      preemptible_tries = preemptible_tries 
-  } 
- 
-  # Estimate level of cross-sample contamination 
-  call Processing.CheckContamination as CheckContamination { 
-    input: 
-      input_bam = SortSampleBam.output_bam, 
-      input_bam_index = SortSampleBam.output_bam_index, 
-      contamination_sites_ud = contamination_sites_ud, 
-      contamination_sites_bed = contamination_sites_bed, 
-      contamination_sites_mu = contamination_sites_mu, 
-      ref_fasta = ref_fasta, 
-      ref_fasta_index = ref_fasta_index, 
-      output_prefix = base_file_name + ".preBqsr", 
-      preemptible_tries = agg_preemptible_tries, 
-      contamination_underestimation_factor = 0.75 
-  } 
- 
-  # We need disk to localize the sharded input and output due to the scatter for BQSR. 
-  # If we take the number we are scattering by and reduce by 3 we will have enough disk space 
-  # to account for the fact that the data is not split evenly. 
-  Int num_of_bqsr_scatters = length(CreateSequenceGroupingTSV.sequence_grouping) 
-  Int potential_bqsr_divisor = num_of_bqsr_scatters - 10 
-  Int bqsr_divisor = if potential_bqsr_divisor > 1 then potential_bqsr_divisor else 1 
- 
-  # Perform Base Quality Score Recalibration (BQSR) on the sorted BAM in parallel 
-  scatter (subgroup in CreateSequenceGroupingTSV.sequence_grouping) { 
-    # Generate the recalibration model by interval 
-    call Processing.BaseRecalibrator as BaseRecalibrator { 
-      input: 
-        input_bam = SortSampleBam.output_bam, 
-        recalibration_report_filename = base_file_name + ".recal_data.csv", 
-        sequence_group_interval = subgroup, 
-        dbSNP_vcf = dbSNP_vcf, 
-        dbSNP_vcf_index = dbSNP_vcf_index, 
-        known_indels_sites_VCFs = known_indels_sites_VCFs, 
-        known_indels_sites_indices = known_indels_sites_indices, 
-        ref_dict = ref_dict, 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        bqsr_scatter = bqsr_divisor, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
-  } 
- 
-  # Merge the recalibration reports resulting from by-interval recalibration 
-  # The reports are always the same size 
-  call Processing.GatherBqsrReports as GatherBqsrReports { 
-    input: 
-      input_bqsr_reports = BaseRecalibrator.recalibration_report, 
-      output_report_filename = base_file_name + ".recal_data.csv", 
-      preemptible_tries = preemptible_tries 
-  } 
- 
-  scatter (subgroup in CreateSequenceGroupingTSV.sequence_grouping_with_unmapped) { 
-    # Apply the recalibration model by interval 
-    call Processing.ApplyBQSR as ApplyBQSR { 
-      input: 
-        input_bam = SortSampleBam.output_bam, 
-        output_bam_basename = recalibrated_bam_basename, 
-        recalibration_report = GatherBqsrReports.output_bqsr_report, 
-        sequence_group_interval = subgroup, 
-        ref_dict = ref_dict, 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        bqsr_scatter = bqsr_divisor, 
-        compression_level = compression_level, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
-  } 
- 
-  Float agg_bam_size = size(SortSampleBam.output_bam, "GB") 
- 
-  # Merge the recalibrated BAM files resulting from by-interval recalibration 
-  call Processing.GatherSortedBamFiles as GatherBamFiles { 
-    input: 
-      input_bams = ApplyBQSR.recalibrated_bam, 
-      output_bam_basename = base_file_name, 
-      total_input_size = agg_bam_size, 
-      compression_level = compression_level, 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  #BQSR bins the qualities which makes a significantly smaller bam 
-  Float binned_qual_bam_size = size(GatherBamFiles.output_bam, "GB") 
- 
-  File? chimerism_metrics 
- 
-  if (!skip_QC) { 
-    # QC the final BAM (consolidated after scattered BQSR) 
-    call QC.CollectReadgroupBamQualityMetrics as CollectReadgroupBamQualityMetrics { 
-      input: 
-        input_bam = GatherBamFiles.output_bam, 
-        input_bam_index = GatherBamFiles.output_bam_index, 
-        output_bam_prefix = base_file_name + ".readgroup", 
-        ref_dict = ref_dict, 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
- 
-    # QC the final BAM some more (no such thing as too much QC) 
-    call QC.CollectAggregationMetrics as CollectAggregationMetrics { 
-      input: 
-        input_bam = GatherBamFiles.output_bam, 
-        input_bam_index = GatherBamFiles.output_bam_index, 
-        output_bam_prefix = base_file_name, 
-        ref_dict = ref_dict, 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
- 
-    # QC the sample WGS metrics (stringent thresholds) 
-    call QC.CollectWgsMetrics as CollectWgsMetrics { 
-      input: 
-        input_bam = GatherBamFiles.output_bam, 
-        input_bam_index = GatherBamFiles.output_bam_index, 
-        metrics_filename = base_file_name + ".wgs_metrics", 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        wgs_coverage_interval_list = wgs_coverage_interval_list, 
-        read_length = read_length, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
- 
-    # QC the sample raw WGS metrics (common thresholds) 
-    call QC.CollectRawWgsMetrics as CollectRawWgsMetrics { 
-      input: 
-        input_bam = GatherBamFiles.output_bam, 
-        input_bam_index = GatherBamFiles.output_bam_index, 
-        metrics_filename = base_file_name + ".raw_wgs_metrics", 
-        ref_fasta = ref_fasta, 
-        ref_fasta_index = ref_fasta_index, 
-        wgs_coverage_interval_list = wgs_coverage_interval_list, 
-        read_length = read_length, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
- 
-    # Generate a checksum per readgroup in the final BAM 
-    call QC.CalculateReadGroupChecksum as CalculateReadGroupChecksum { 
-      input: 
-        input_bam = GatherBamFiles.output_bam, 
-        input_bam_index = GatherBamFiles.output_bam_index, 
-        read_group_md5_filename = recalibrated_bam_basename + ".bam.read_group_md5", 
-        preemptible_tries = agg_preemptible_tries 
-    } 
-  } 
- 
-  # ValidateSamFile runs out of memory in mate validation on crazy edge case data, so we want to skip the mate validation 
-  # in those cases.  These values set the thresholds for what is considered outside the normal realm of "reasonable" data. 
-  Float max_duplication_in_reasonable_sample = 0.30 
-  Float max_chimerism_in_reasonable_sample = 0.15 
- 
-  # Convert the final merged recalibrated BAM file to CRAM format 
-  call Utils.ConvertToCram as ConvertToCram { 
-    input: 
-      input_bam = GatherBamFiles.output_bam, 
-      ref_fasta = ref_fasta, 
-      ref_fasta_index = ref_fasta_index, 
-      output_basename = base_file_name, 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  if (!skip_QC) { 
-    # Check whether the data has massively high duplication or chimerism rates 
-    call QC.CheckPreValidation as CheckPreValidation { 
-      input: 
-        duplication_metrics = MarkDuplicates.duplicate_metrics, 
-        chimerism_metrics = select_first([CollectAggregationMetrics.alignment_summary_metrics, ""]), 
-        max_duplication_in_reasonable_sample = max_duplication_in_reasonable_sample, 
-        max_chimerism_in_reasonable_sample = max_chimerism_in_reasonable_sample, 
-        preemptible_tries = agg_preemptible_tries 
-    } 
-  } 
- 
-  Boolean is_outlier_data = select_first([CheckPreValidation.is_outlier_data, false]) 
- 
-  # Validate the CRAM file 
-  call QC.ValidateSamFile as ValidateCram { 
-    input: 
-      input_bam = ConvertToCram.output_cram, 
-      input_bam_index = ConvertToCram.output_cram_index, 
-      report_filename = base_file_name + ".cram.validation_report", 
-      ref_dict = ref_dict, 
-      ref_fasta = ref_fasta, 
-      ref_fasta_index = ref_fasta_index, 
-      ignore = ["MISSING_TAG_NM"], 
-      max_output = 1000000000, 
-      is_outlier_data = is_outlier_data, 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  # Break the calling interval_list into sub-intervals 
-  # Perform variant calling on the sub-intervals, and then gather the results 
-  call Utils.ScatterIntervalList as ScatterIntervalList { 
-    input: 
-      interval_list = wgs_calling_interval_list, 
-      scatter_count = haplotype_scatter_count, 
-      break_bands_at_multiples_of = break_bands_at_multiples_of 
-  } 
- 
-  # We need disk to localize the sharded input and output due to the scatter for HaplotypeCaller. 
-  # If we take the number we are scattering by and reduce by 20 we will have enough disk space 
-  # to account for the fact that the data is quite uneven across the shards. 
-  Int potential_hc_divisor = ScatterIntervalList.interval_count - 20 
-  Int hc_divisor = if potential_hc_divisor > 1 then potential_hc_divisor else 1 
- 
-  # Call variants in parallel over WGS calling intervals 
-  scatter (index in range(ScatterIntervalList.interval_count)) { 
- 
-    if (make_gatk4_single_sample_vcf || use_gatk4_haplotype_caller) { 
-      call Calling.HaplotypeCaller_GATK4_VCF as HaplotypeCaller4 { 
-        input: 
-          contamination = CheckContamination.contamination, 
-          input_bam = GatherBamFiles.output_bam, 
-          interval_list = ScatterIntervalList.out[index], 
-          make_gvcf = !make_gatk4_single_sample_vcf, 
-          vcf_basename = base_file_name, 
-          ref_dict = ref_dict, 
-          ref_fasta = ref_fasta, 
-          ref_fasta_index = ref_fasta_index, 
-          hc_scatter = hc_divisor, 
-          preemptible_tries = agg_preemptible_tries 
-      } 
- 
-      if (make_gatk4_single_sample_vcf) { 
-        call Calling.HardFilterVcf as FilterVcf { 
-          input: 
-            input_vcf = HaplotypeCaller4.output_vcf, 
-            input_vcf_index = HaplotypeCaller4.output_vcf_index, 
-            vcf_basename = base_file_name, 
-            interval_list = ScatterIntervalList.out[index], 
-            preemptible_tries = preemptible_tries 
-        } 
-      } 
-    } 
-    if (!make_gatk4_single_sample_vcf && !use_gatk4_haplotype_caller) { 
-      call Calling.HaplotypeCaller_GATK35_GVCF as HaplotypeCaller3 { 
-        input: 
-          contamination = CheckContamination.contamination, 
-          input_bam = GatherBamFiles.output_bam, 
-          interval_list = ScatterIntervalList.out[index], 
-          gvcf_basename = base_file_name, 
-          ref_dict = ref_dict, 
-          ref_fasta = ref_fasta, 
-          ref_fasta_index = ref_fasta_index, 
-          hc_scatter = hc_divisor, 
-          preemptible_tries = agg_preemptible_tries 
-       } 
-     } 
- 
-     File merge_input = select_first([FilterVcf.output_vcf, HaplotypeCaller4.output_vcf, HaplotypeCaller3.output_gvcf]) 
-     File merge_input_index = select_first([FilterVcf.output_vcf_index, HaplotypeCaller4.output_vcf_index, HaplotypeCaller3.output_gvcf_index]) 
-  } 
- 
-  String name_token = if make_gatk4_single_sample_vcf then ".filtered" else ".g" 
- 
-  # Combine by-interval VCFs into a single sample VCF file 
-  call Calling.MergeVCFs as MergeVCFs { 
-    input: 
-      input_vcfs = merge_input, 
-      input_vcfs_indexes = merge_input_index, 
-      output_vcf_name = final_vcf_base_name + name_token + ".vcf.gz", 
-      preemptible_tries = agg_preemptible_tries 
-  } 
- 
-  # Outputs that will be retained when execution is complete 
-  output { 
-    Array[File?] quality_yield_metrics = CollectQualityYieldMetrics.quality_yield_metrics 
- 
-    Array[File?] unsorted_read_group_base_distribution_by_cycle_pdf = CollectUnsortedReadgroupBamQualityMetrics.base_distribution_by_cycle_pdf 
-    Array[File?] unsorted_read_group_base_distribution_by_cycle_metrics = CollectUnsortedReadgroupBamQualityMetrics.base_distribution_by_cycle_metrics 
-    Array[File?] unsorted_read_group_insert_size_histogram_pdf = CollectUnsortedReadgroupBamQualityMetrics.insert_size_histogram_pdf 
-    Array[File?] unsorted_read_group_insert_size_metrics = CollectUnsortedReadgroupBamQualityMetrics.insert_size_metrics 
-    Array[File?] unsorted_read_group_quality_by_cycle_pdf = CollectUnsortedReadgroupBamQualityMetrics.quality_by_cycle_pdf 
-    Array[File?] unsorted_read_group_quality_by_cycle_metrics = CollectUnsortedReadgroupBamQualityMetrics.quality_by_cycle_metrics 
-    Array[File?] unsorted_read_group_quality_distribution_pdf = CollectUnsortedReadgroupBamQualityMetrics.quality_distribution_pdf 
-    Array[File?] unsorted_read_group_quality_distribution_metrics = CollectUnsortedReadgroupBamQualityMetrics.quality_distribution_metrics 
- 
-    File? read_group_alignment_summary_metrics = CollectReadgroupBamQualityMetrics.alignment_summary_metrics 
-    File? read_group_gc_bias_detail_metrics = CollectReadgroupBamQualityMetrics.gc_bias_detail_metrics 
-    File? read_group_gc_bias_pdf = CollectReadgroupBamQualityMetrics.gc_bias_pdf 
-    File? read_group_gc_bias_summary_metrics = CollectReadgroupBamQualityMetrics.gc_bias_summary_metrics 
- 
-    File selfSM = CheckContamination.selfSM 
-    Float contamination = CheckContamination.contamination 
- 
-    File? calculate_read_group_checksum_md5 = CalculateReadGroupChecksum.md5_file 
- 
-    File? agg_alignment_summary_metrics = CollectAggregationMetrics.alignment_summary_metrics 
-    File? agg_bait_bias_detail_metrics = CollectAggregationMetrics.bait_bias_detail_metrics 
-    File? agg_bait_bias_summary_metrics = CollectAggregationMetrics.bait_bias_summary_metrics 
-    File? agg_gc_bias_detail_metrics = CollectAggregationMetrics.gc_bias_detail_metrics 
-    File? agg_gc_bias_pdf = CollectAggregationMetrics.gc_bias_pdf 
-    File? agg_gc_bias_summary_metrics = CollectAggregationMetrics.gc_bias_summary_metrics 
-    File? agg_insert_size_histogram_pdf = CollectAggregationMetrics.insert_size_histogram_pdf 
-    File? agg_insert_size_metrics = CollectAggregationMetrics.insert_size_metrics 
-    File? agg_pre_adapter_detail_metrics = CollectAggregationMetrics.pre_adapter_detail_metrics 
-    File? agg_pre_adapter_summary_metrics = CollectAggregationMetrics.pre_adapter_summary_metrics 
-    File? agg_quality_distribution_pdf = CollectAggregationMetrics.quality_distribution_pdf 
-    File? agg_quality_distribution_metrics = CollectAggregationMetrics.quality_distribution_metrics 
- 
-    File? wgs_metrics = CollectWgsMetrics.metrics 
-    File? raw_wgs_metrics = CollectRawWgsMetrics.metrics 
- 
-    File duplicate_metrics = MarkDuplicates.duplicate_metrics 
-    File output_bqsr_reports = GatherBqsrReports.output_bqsr_report 
- 
-    File output_cram = ConvertToCram.output_cram 
-    File output_cram_index = ConvertToCram.output_cram_index 
-    File output_cram_md5 = ConvertToCram.output_cram_md5 
- 
-    File validate_cram_file_report = ValidateCram.report 
- 
-    File output_vcf = MergeVCFs.output_vcf 
-    File output_vcf_index = MergeVCFs.output_vcf_index 
-  } 
-}
diff --git a/scripts/perf/test_cases/gary/gary.inputs b/scripts/perf/test_cases/gary/gary.inputs
deleted file mode 100644
index 6c630f09e27..00000000000
--- a/scripts/perf/test_cases/gary/gary.inputs
+++ /dev/null
@@ -1,12 +0,0 @@
-{
-  "echo_strings.echo_files.input1": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input5": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input2": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input10": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input6": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input9": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input3": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input7": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input8": "gs://debtest3/h.txt",
-  "echo_strings.echo_files.input4": "gs://debtest3/h.txt"
-}
diff --git a/scripts/perf/test_cases/gary/gary.test b/scripts/perf/test_cases/gary/gary.test
deleted file mode 100644
index 5b1f5783afd..00000000000
--- a/scripts/perf/test_cases/gary/gary.test
+++ /dev/null
@@ -1,11 +0,0 @@
-name: gary
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/gary/gary.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/$BRANCH/scripts/perf/test_cases/gary/gary.inputs"
-}
-
-metadata {
-  status: Succeeded
-}
diff --git a/scripts/perf/test_cases/gary/gary.wdl b/scripts/perf/test_cases/gary/gary.wdl
deleted file mode 100644
index 57652bb28e4..00000000000
--- a/scripts/perf/test_cases/gary/gary.wdl
+++ /dev/null
@@ -1,40 +0,0 @@
-task echo_files {
-  File input1
-  File input2
-  File input3
-  File input4
-  File input5
-  File input6
-  File input7
-  File input8
-  File input9
-  File input10
-  
-  Float ref_size = size(input1, "GB") + size(input2, "GB") + size(input3, "GB") + size(input4, "GB") + size(input5, "GB") + size(input6, "GB") + size(input7, "GB") + size(input8, "GB") + size(input9, "GB") + size(input10, "GB")
-  
-  output {
-    String out = read_string(stdout())
-  }
-
-  command {
-    # sleep for 1 hour
-    # sleep 3600
-    
-    echo "result: ${ref_size}"
-  }
-
-  runtime {
-    docker: "ubuntu:latest"
-    cpu: "1"
-    memory: "0.1 GB"
-    preemptible: 3
-    disks: "local-disk 1 HDD"
-    bootDiskSizeGb: 10
-  }
-}
-
-workflow echo_strings {
-  scatter (i in range(30)) {
-      call echo_files
-  }
-}
diff --git a/scripts/perf/test_cases/hello/hello.test b/scripts/perf/test_cases/hello/hello.test
deleted file mode 100644
index accd48f9a23..00000000000
--- a/scripts/perf/test_cases/hello/hello.test
+++ /dev/null
@@ -1,16 +0,0 @@
-name: hello
-testFormat: workflowsuccess
-
-files {
-  workflow: "https://raw.githubusercontent.com/broadinstitute/cromwell/develop/centaur/src/main/resources/standardTestCases/hello/hello.wdl"
-  inputs: "https://raw.githubusercontent.com/broadinstitute/cromwell/develop/centaur/src/main/resources/standardTestCases/hello/hello.inputs"
-}
-
-metadata {
-  workflowName: wf_hello
-  status: Succeeded
-  "calls.wf_hello.hello.executionStatus": Done
-  "calls.wf_hello.hello.runtimeAttributes.docker": "ubuntu@sha256:71cd81252a3563a03ad8daee81047b62ab5d892ebbfbf71cf53415f29c130950"
-  "outputs.wf_hello.hello.salutation": "Hello m'Lord!"
-  "inputs.wf_hello.hello.addressee": "m'Lord"
-}
diff --git a/scripts/perf/test_cases/reader/cromwell.conf b/scripts/perf/test_cases/reader/cromwell.conf
deleted file mode 100644
index 7a282f4e171..00000000000
--- a/scripts/perf/test_cases/reader/cromwell.conf
+++ /dev/null
@@ -1,8 +0,0 @@
-include required("cromwell_default.conf")
-
-system {
-  cromwell_id = "perf-reader"
-  max-concurrent-workflows = 0
-  max-workflow-launch-count = 0
-  new-workflow-poll-rate = 999999
-}
diff --git a/scripts/perf/vm_scripts/centaur/centaur.conf b/scripts/perf/vm_scripts/centaur/centaur.conf
deleted file mode 100644
index 6f6cbfab9d1..00000000000
--- a/scripts/perf/vm_scripts/centaur/centaur.conf
+++ /dev/null
@@ -1,17 +0,0 @@
-akka.http.client.parsing.max-content-length = 524288000
-
-centaur {
-  error-reporter {
-    retry-attempts: 0
-    providers {
-      gcs {
-        # Reports metadata to gcs for both successes and failures
-        class: "centaur.reporting.GcsReporter"
-        config {
-          report-bucket: ${?GCS_REPORT_BUCKET}
-          report-path: ${?GCS_REPORT_PATH}/metadata.json
-        }
-      }
-    }
-  }
-}
diff --git a/scripts/perf/vm_scripts/cromwell-dashboard.json b/scripts/perf/vm_scripts/cromwell-dashboard.json
deleted file mode 100644
index f11c19a2981..00000000000
--- a/scripts/perf/vm_scripts/cromwell-dashboard.json
+++ /dev/null
@@ -1,1703 +0,0 @@
-{
-  "__inputs": [
-    {
-      "name": "DS_LOCAL_GRAPHITE",
-      "label": "Local Graphite",
-      "description": "",
-      "type": "datasource",
-      "pluginId": "graphite",
-      "pluginName": "Graphite"
-    }
-  ],
-  "__requires": [
-    {
-      "type": "grafana",
-      "id": "grafana",
-      "name": "Grafana",
-      "version": "4.4.3"
-    },
-    {
-      "type": "panel",
-      "id": "graph",
-      "name": "Graph",
-      "version": ""
-    },
-    {
-      "type": "datasource",
-      "id": "graphite",
-      "name": "Graphite",
-      "version": "1.0.0"
-    },
-    {
-      "type": "panel",
-      "id": "singlestat",
-      "name": "Singlestat",
-      "version": ""
-    }
-  ],
-  "annotations": {
-    "list": []
-  },
-  "editable": true,
-  "gnetId": null,
-  "graphTooltip": 0,
-  "hideControls": false,
-  "id": null,
-  "links": [],
-  "refresh": "5s",
-  "rows": [
-    {
-      "collapse": false,
-      "height": 222,
-      "panels": [
-        {
-          "aliasColors": {},
-          "bars": false,
-          "dashLength": 10,
-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 15,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": false,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "null as zero",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 2,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "B",
-              "target": "stats.gauges.cromwell.load.IO"
-            },
-            {
-              "refId": "C",
-              "target": "stats.gauges.cromwell.load.JobStoreReaderActor"
-            },
-            {
-              "refId": "D",
-              "target": "stats.gauges.cromwell.load.JobStoreWriterActor"
-            },
-            {
-              "refId": "E",
-              "target": "stats.gauges.cromwell.load.KvReadActor"
-            },
-            {
-              "refId": "F",
-              "target": "stats.gauges.cromwell.load.KvWriteActor"
-            },
-            {
-              "refId": "G",
-              "target": "stats.gauges.cromwell.load.Memory"
-            },
-            {
-              "refId": "H",
-              "target": "stats.gauges.cromwell.load.PAPIQueryManager"
-            },
-            {
-              "refId": "I",
-              "target": "stats.gauges.cromwell.load.WriteMetadataActor"
-            },
-            {
-              "refId": "J",
-              "target": "maxSeries(stats.gauges.cromwell.load.CallCacheReadActor.*)"
-            },
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.load.CallCacheWriteActor"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Load Levels",
-          "tooltip": {
-            "msResolution": false,
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        },
-        {
-          "cacheTimeout": null,
-          "colorBackground": false,
-          "colorValue": true,
-          "colors": [
-            "rgba(50, 172, 45, 0.97)",
-            "rgba(237, 129, 40, 0.89)",
-            "rgba(245, 54, 54, 0.9)"
-          ],
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "format": "none",
-          "gauge": {
-            "maxValue": 100,
-            "minValue": 0,
-            "show": false,
-            "thresholdLabels": false,
-            "thresholdMarkers": true
-          },
-          "id": 9,
-          "interval": null,
-          "links": [],
-          "mappingType": 1,
-          "mappingTypes": [
-            {
-              "name": "value to text",
-              "value": 1
-            },
-            {
-              "name": "range to text",
-              "value": 2
-            }
-          ],
-          "maxDataPoints": 100,
-          "nullPointMode": "connected",
-          "nullText": null,
-          "postfix": "",
-          "postfixFontSize": "50%",
-          "prefix": "",
-          "prefixFontSize": "50%",
-          "rangeMaps": [
-            {
-              "from": "null",
-              "text": "N/A",
-              "to": "null"
-            }
-          ],
-          "span": 2,
-          "sparkline": {
-            "fillColor": "rgba(31, 118, 189, 0.18)",
-            "full": false,
-            "lineColor": "rgb(31, 120, 193)",
-            "show": false
-          },
-          "tableColumn": "",
-          "targets": [
-            {
-              "refId": "A",
-              "target": "keepLastValue(stats.gauges.cromwell.load.global, 1)"
-            }
-          ],
-          "thresholds": "1",
-          "title": "Load",
-          "type": "singlestat",
-          "valueFontSize": "80%",
-          "valueMaps": [
-            {
-              "op": "=",
-              "text": "Normal",
-              "value": "0"
-            },
-            {
-              "op": "=",
-              "text": "High",
-              "value": "1"
-            }
-          ],
-          "valueName": "current"
-        },
-        {
-          "cacheTimeout": null,
-          "colorBackground": false,
-          "colorValue": false,
-          "colors": [
-            "rgba(245, 54, 54, 0.9)",
-            "rgba(237, 129, 40, 0.89)",
-            "rgba(50, 172, 45, 0.97)"
-          ],
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "editable": true,
-          "error": false,
-          "format": "none",
-          "gauge": {
-            "maxValue": 100,
-            "minValue": 0,
-            "show": false,
-            "thresholdLabels": false,
-            "thresholdMarkers": true
-          },
-          "hideTimeOverride": true,
-          "id": 20,
-          "interval": null,
-          "links": [],
-          "mappingType": 1,
-          "mappingTypes": [
-            {
-              "name": "value to text",
-              "value": 1
-            },
-            {
-              "name": "range to text",
-              "value": 2
-            }
-          ],
-          "maxDataPoints": 100,
-          "nullPointMode": "connected",
-          "nullText": null,
-          "postfix": "",
-          "postfixFontSize": "50%",
-          "prefix": "",
-          "prefixFontSize": "50%",
-          "rangeMaps": [
-            {
-              "from": "null",
-              "text": "N/A",
-              "to": "null"
-            }
-          ],
-          "span": 2,
-          "sparkline": {
-            "fillColor": "rgba(31, 118, 189, 0.18)",
-            "full": false,
-            "lineColor": "rgb(31, 120, 193)",
-            "show": false
-          },
-          "tableColumn": "",
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.workflow.Queued"
-            }
-          ],
-          "thresholds": "",
-          "timeFrom": "5m",
-          "timeShift": null,
-          "title": "Workflows Queued",
-          "type": "singlestat",
-          "valueFontSize": "80%",
-          "valueMaps": [
-            {
-              "op": "=",
-              "text": "N/A",
-              "value": "null"
-            }
-          ],
-          "valueName": "current"
-        },
-        {
-          "cacheTimeout": null,
-          "colorBackground": false,
-          "colorValue": false,
-          "colors": [
-            "rgba(245, 54, 54, 0.9)",
-            "rgba(237, 129, 40, 0.89)",
-            "rgba(50, 172, 45, 0.97)"
-          ],
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "editable": true,
-          "error": false,
-          "format": "none",
-          "gauge": {
-            "maxValue": 100,
-            "minValue": 0,
-            "show": false,
-            "thresholdLabels": false,
-            "thresholdMarkers": true
-          },
-          "hideTimeOverride": true,
-          "id": 19,
-          "interval": null,
-          "links": [],
-          "mappingType": 1,
-          "mappingTypes": [
-            {
-              "name": "value to text",
-              "value": 1
-            },
-            {
-              "name": "range to text",
-              "value": 2
-            }
-          ],
-          "maxDataPoints": 100,
-          "nullPointMode": "connected",
-          "nullText": null,
-          "postfix": "",
-          "postfixFontSize": "50%",
-          "prefix": "",
-          "prefixFontSize": "50%",
-          "rangeMaps": [
-            {
-              "from": "null",
-              "text": "N/A",
-              "to": "null"
-            }
-          ],
-          "span": 2,
-          "sparkline": {
-            "fillColor": "rgba(31, 118, 189, 0.18)",
-            "full": false,
-            "lineColor": "rgb(31, 120, 193)",
-            "show": false
-          },
-          "tableColumn": "",
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.workflow.Running"
-            }
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-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 7,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": false,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "connected",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 6,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.services.keyvalue.*.processed.m1_rate"
-            },
-            {
-              "refId": "C",
-              "target": "stats.gauges.cromwell.job.store.*.processed.m1_rate"
-            },
-            {
-              "refId": "D",
-              "target": "sumSeries(stats.gauges.cromwell.job.callcaching.read.*.processed.m1_rate, *)"
-            },
-            {
-              "refId": "E",
-              "target": "stats.gauges.cromwell.job.callcaching.write.processed.m1_rate"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Engine Throughput",
-          "tooltip": {
-            "msResolution": false,
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        },
-        {
-          "aliasColors": {},
-          "bars": false,
-          "dashLength": 10,
-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 4,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": false,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "connected",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 6,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "C",
-              "target": "stats.gauges.cromwell.job.store.*.queue"
-            },
-            {
-              "refId": "D",
-              "target": "stats.gauges.cromwell.services.keyvalue.*.queue"
-            },
-            {
-              "refId": "A",
-              "target": "sumSeries(stats.gauges.cromwell.job.callcaching.read.*.queue, *)"
-            },
-            {
-              "refId": "B",
-              "target": "stats.gauges.cromwell.job.callcaching.write.queue"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Engine Queues",
-          "tooltip": {
-            "msResolution": false,
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        }
-      ],
-      "repeat": null,
-      "repeatIteration": null,
-      "repeatRowId": null,
-      "showTitle": false,
-      "title": "Dashboard Row",
-      "titleSize": "h6"
-    },
-    {
-      "collapse": false,
-      "height": 315,
-      "panels": [
-        {
-          "aliasColors": {},
-          "bars": false,
-          "dashLength": 10,
-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 10,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": true,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "connected",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 6,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.services.metadata.processed.m1_rate"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Metadata Throughput",
-          "tooltip": {
-            "msResolution": false,
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        },
-        {
-          "aliasColors": {},
-          "bars": false,
-          "dashLength": 10,
-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 11,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": true,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "connected",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 6,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.services.metadata.queue"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Metadata Queue",
-          "tooltip": {
-            "msResolution": false,
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        }
-      ],
-      "repeat": null,
-      "repeatIteration": null,
-      "repeatRowId": null,
-      "showTitle": false,
-      "title": "Dashboard Row",
-      "titleSize": "h6"
-    },
-    {
-      "collapse": false,
-      "height": 250,
-      "panels": [
-        {
-          "aliasColors": {},
-          "bars": false,
-          "dashLength": 10,
-          "dashes": false,
-          "datasource": "${DS_LOCAL_GRAPHITE}",
-          "fill": 1,
-          "id": 22,
-          "legend": {
-            "avg": false,
-            "current": false,
-            "max": false,
-            "min": false,
-            "show": true,
-            "total": false,
-            "values": false
-          },
-          "lines": true,
-          "linewidth": 1,
-          "links": [],
-          "nullPointMode": "null",
-          "percentage": false,
-          "pointradius": 5,
-          "points": false,
-          "renderer": "flot",
-          "seriesOverrides": [],
-          "spaceLength": 10,
-          "span": 12,
-          "stack": false,
-          "steppedLine": false,
-          "targets": [
-            {
-              "refId": "A",
-              "target": "stats.gauges.cromwell.io.gcs.batch.timing.mean"
-            }
-          ],
-          "thresholds": [],
-          "timeFrom": null,
-          "timeShift": null,
-          "title": "Batch request timing",
-          "tooltip": {
-            "shared": true,
-            "sort": 0,
-            "value_type": "individual"
-          },
-          "type": "graph",
-          "xaxis": {
-            "buckets": null,
-            "mode": "time",
-            "name": null,
-            "show": true,
-            "values": []
-          },
-          "yaxes": [
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            },
-            {
-              "format": "short",
-              "label": null,
-              "logBase": 1,
-              "max": null,
-              "min": null,
-              "show": true
-            }
-          ]
-        }
-      ],
-      "repeat": null,
-      "repeatIteration": null,
-      "repeatRowId": null,
-      "showTitle": false,
-      "title": "Dashboard Row",
-      "titleSize": "h6"
-    }
-  ],
-  "schemaVersion": 14,
-  "style": "dark",
-  "tags": [],
-  "templating": {
-    "list": []
-  },
-  "time": {
-    "from": "now-15m",
-    "to": "now"
-  },
-  "timepicker": {
-    "refresh_intervals": [
-      "5s",
-      "10s",
-      "30s",
-      "1m",
-      "5m",
-      "15m",
-      "30m",
-      "1h",
-      "2h",
-      "1d"
-    ],
-    "time_options": [
-      "5m",
-      "15m",
-      "1h",
-      "6h",
-      "12h",
-      "24h",
-      "2d",
-      "7d",
-      "30d"
-    ]
-  },
-  "timezone": "browser",
-  "title": "Cromwell",
-  "version": 6
-}
\ No newline at end of file
diff --git a/scripts/perf/vm_scripts/cromwell/cromwell.conf b/scripts/perf/vm_scripts/cromwell/cromwell.conf
deleted file mode 100644
index 9fb29a28b16..00000000000
--- a/scripts/perf/vm_scripts/cromwell/cromwell.conf
+++ /dev/null
@@ -1,95 +0,0 @@
-include required(classpath("application.conf"))
-
-akka.http.server.request-timeout = 600 seconds
-
-google {
-
-  application-name = "cromwell"
-
-  auths = [
-    {
-      name = "application-default"
-      scheme = "application_default"
-    }
-    {
-      name = "user-service-account"
-      scheme = "user_service_account"
-    }
-  ]
-}
-
-engine {
-  filesystems {
-    gcs {
-      auth = "application-default"
-      project = ${?CROMWELL_PROJECT}
-    }
-  }
-}
-
-call-caching {
-  # Allows re-use of existing results for jobs you've already run
-  # (default: false)
-  enabled = true
-
-  # Whether to invalidate a cache result forever if we cannot reuse them. Disable this if you expect some cache copies
-  # to fail for external reasons which should not invalidate the cache (e.g. auth differences between users):
-  # (default: true)
-  invalidate-bad-cache-results = false
-}
-
-system {
-  cromwell_id = "perf-runner"
-  io.number-of-requests = 10240611
-}
-
-backend {
-  default = "Papi"
-  enabled = ["Papi"]
-  providers {
-    Papi {
-      actor-factory = "cromwell.backend.google.pipelines.v1alpha2.PipelinesApiLifecycleActorFactory"
-      config {
-        project = ${?CROMWELL_PROJECT}
-        root = ${?CROMWELL_EXECUTION_ROOT}
-        maximum-polling-interval = 600
-        concurrent-job-limit = 1000
-
-        genomics {
-          auth = "application-default"
-          endpoint-url = "https://genomics.googleapis.com/"
-        }
-
-        filesystems {
-          gcs {
-            auth = "application-default"
-            project = ${?CROMWELL_PROJECT}
-          }
-        }
-      }
-    }
-  }
-}
-
-services {
-  Instrumentation {
-    # Stackdriver - Send metrics to Google's monitoring API
-    class = "cromwell.services.instrumentation.impl.stackdriver.StackdriverInstrumentationServiceActor"
-    config {
-      auth = "application-default"
-      google-project = ${?CROMWELL_PROJECT}
-      # rate at which aggregated metrics will be sent to Stackdriver API, must be 1 minute or more.
-      flush-rate = 1 minute
-      cromwell-perf-test-case = ${?TEST_CASE_DIRECTORY}
-    }
-  }
-}
-
-database {
-  db.url = "jdbc:mysql://cloudsql-db/cromwell?useSSL=true&rewriteBatchedStatements=true"
-  db.user = ${?CLOUD_SQL_DB_USER}
-  db.password = ${?CLOUD_SQL_DB_PASSWORD}
-  db.driver = "com.mysql.cj.jdbc.Driver"
-  db.connectionTimeout=30000
-  profile = "slick.jdbc.MySQLProfile$"
-}
diff --git a/scripts/perf/vm_scripts/docker-compose.yml b/scripts/perf/vm_scripts/docker-compose.yml
deleted file mode 100644
index a6e05ced58c..00000000000
--- a/scripts/perf/vm_scripts/docker-compose.yml
+++ /dev/null
@@ -1,32 +0,0 @@
-version: '2'
-networks:
-   mysql_net:
-     driver: bridge
-services:
-  cromwell:
-    image: "${CROMWELL_DOCKER_IMAGE}"
-    volumes:
-      - ${CROMWELL_CONF_DIR}:/conf
-    environment:
-      - CROMWELL_PROJECT
-      - CROMWELL_EXECUTION_ROOT
-      - CLOUD_SQL_DB_USER
-      - CLOUD_SQL_DB_PASSWORD
-      - TEST_CASE_DIRECTORY
-      - JAVA_OPTS=-Dconfig.file=/conf/cromwell.conf
-    command: ["server"]
-    depends_on:
-      - cloudsql-db
-    ports:
-      - "8000:8000"
-    networks:
-      mysql_net:
-    container_name: cromwell
-  cloudsql-db:
-    image: "gcr.io/cloudsql-docker/gce-proxy:1.11"
-    ports:
-      - "127.0.0.1:3306:3306"
-    container_name: cloudsql-db
-    command: ["/cloud_sql_proxy", "-instances=broad-dsde-cromwell-perf:us-central1:${CLOUD_SQL_INSTANCE}=tcp:0.0.0.0:3306"]
-    networks:
-      mysql_net:
diff --git a/scripts/perf/vm_scripts/statsd-proxy/proxy.conf b/scripts/perf/vm_scripts/statsd-proxy/proxy.conf
deleted file mode 100644
index 900347fa203..00000000000
--- a/scripts/perf/vm_scripts/statsd-proxy/proxy.conf
+++ /dev/null
@@ -1,11 +0,0 @@
-proxy {
-  host = ${?PROXY_HOST}
-  port = ${?PROXY_PORT}
-}
-
-statsd {
-  host = ${?CROMWELL_STATSD_HOST}
-  port = ${?CROMWELL_STATSD_PORT}
-}
-
-output-file = "file:///conf/statsd.log"